RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 PRAM1Q96QH2 718 aa12.6□□□□□ -0.39
TRIO-209ENST00000507714 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
TRIO-209ENST00000507714 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
TRIO-209ENST00000507714 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
TRIO-209ENST00000507714 PTCH1Q13635 1447 aa12.59□□□□□ -0.39
TRIO-209ENST00000507714 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
TRIO-209ENST00000507714 TMF1P82094 1093 aa12.58□□□□□ -0.4
TRIO-209ENST00000507714 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
TRIO-209ENST00000507714 PTPRUQ92729 1446 aa12.58□□□□□ -0.4
TRIO-209ENST00000507714 RBM33Q96EV2 1170 aaKnown RBP12.57□□□□□ -0.4
TRIO-209ENST00000507714 C19orf44Q9H6X5 657 aa12.57□□□□□ -0.4
TRIO-209ENST00000507714 QRICH2Q9H0J4 1663 aa12.57□□□□□ -0.4
TRIO-209ENST00000507714 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
TRIO-209ENST00000507714 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
TRIO-209ENST00000507714 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIO-209ENST00000507714 WAPLQ7Z5K2 1190 aa12.56□□□□□ -0.4
TRIO-209ENST00000507714 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
TRIO-209ENST00000507714 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
TRIO-209ENST00000507714 HIRIP3Q9BW71 556 aaPredicted RBP12.54□□□□□ -0.4
TRIO-209ENST00000507714 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
TRIO-209ENST00000507714 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
TRIO-209ENST00000507714 TESK2Q96S53 571 aa12.53□□□□□ -0.4
TRIO-209ENST00000507714 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.41
TRIO-209ENST00000507714 SLAIN2Q9P270 581 aa12.52□□□□□ -0.41
TRIO-209ENST00000507714 DCCP43146 1447 aa12.52□□□□□ -0.41
TRIO-209ENST00000507714 SRPK2P78362 688 aaKnown RBP12.51□□□□□ -0.41
TRIO-209ENST00000507714 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
TRIO-209ENST00000507714 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
TRIO-209ENST00000507714 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
TRIO-209ENST00000507714 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
TRIO-209ENST00000507714 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
TRIO-209ENST00000507714 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.5□□□□□ -0.41
TRIO-209ENST00000507714 ADGRB2O60241 1585 aa12.48□□□□□ -0.41
TRIO-209ENST00000507714 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
TRIO-209ENST00000507714 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
TRIO-209ENST00000507714 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
TRIO-209ENST00000507714 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.42
TRIO-209ENST00000507714 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
TRIO-209ENST00000507714 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
TRIO-209ENST00000507714 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
TRIO-209ENST00000507714 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
TRIO-209ENST00000507714 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
TRIO-209ENST00000507714 TULP4Q9NRJ4 1543 aa12.44□□□□□ -0.42
TRIO-209ENST00000507714 HSPA1LP34931 641 aa12.44□□□□□ -0.42
TRIO-209ENST00000507714 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
TRIO-209ENST00000507714 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
TRIO-209ENST00000507714 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
TRIO-209ENST00000507714 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
TRIO-209ENST00000507714 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
TRIO-209ENST00000507714 FMN2Q9NZ56 1722 aa12.43□□□□□ -0.42
TRIO-209ENST00000507714 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
TRIO-209ENST00000507714 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
TRIO-209ENST00000507714 ESCO1Q5FWF5 840 aa12.42□□□□□ -0.42
TRIO-209ENST00000507714 TERF2IPQ9NYB0 399 aa12.42□□□□□ -0.42
TRIO-209ENST00000507714 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
TRIO-209ENST00000507714 MST1RQ04912 1400 aa12.41□□□□□ -0.42
TRIO-209ENST00000507714 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
TRIO-209ENST00000507714 PHLPP1O60346 1717 aa12.4□□□□□ -0.42
TRIO-209ENST00000507714 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
TRIO-209ENST00000507714 RGPD8O14715 1765 aaPredicted RBP12.4□□□□□ -0.42
TRIO-209ENST00000507714 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.43
TRIO-209ENST00000507714 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
TRIO-209ENST00000507714 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
TRIO-209ENST00000507714 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
TRIO-209ENST00000507714 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
TRIO-209ENST00000507714 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
TRIO-209ENST00000507714 NGDNQ8NEJ9 315 aaKnown RBP12.38□□□□□ -0.43
TRIO-209ENST00000507714 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
TRIO-209ENST00000507714 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
TRIO-209ENST00000507714 ATP7BP35670 1465 aa12.38□□□□□ -0.43
TRIO-209ENST00000507714 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
TRIO-209ENST00000507714 PRR36Q9H6K5 1346 aa12.37□□□□□ -0.43
TRIO-209ENST00000507714 PANK3Q9H999 370 aa12.37□□□□□ -0.43
TRIO-209ENST00000507714 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
TRIO-209ENST00000507714 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
TRIO-209ENST00000507714 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
TRIO-209ENST00000507714 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
TRIO-209ENST00000507714 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
TRIO-209ENST00000507714 JCADQ9P266 1359 aa12.35□□□□□ -0.43
TRIO-209ENST00000507714 PSME1Q06323 249 aa12.35□□□□□ -0.43
TRIO-209ENST00000507714 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
TRIO-209ENST00000507714 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
TRIO-209ENST00000507714 AHDC1Q5TGY3 1603 aaPredicted RBP12.35□□□□□ -0.43
TRIO-209ENST00000507714 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
TRIO-209ENST00000507714 MEX3CQ5U5Q3 659 aaKnown RBP12.34□□□□□ -0.43
TRIO-209ENST00000507714 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
TRIO-209ENST00000507714 MYOM1P52179 1685 aa12.34□□□□□ -0.43
TRIO-209ENST00000507714 ACEP12821 1306 aa12.34□□□□□ -0.43
TRIO-209ENST00000507714 BRD4O60885 1362 aaPredicted RBP12.33□□□□□ -0.44
TRIO-209ENST00000507714 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
TRIO-209ENST00000507714 FOXO3O43524 673 aa12.33□□□□□ -0.44
TRIO-209ENST00000507714 AKAP12Q02952 1782 aa12.33□□□□□ -0.44
TRIO-209ENST00000507714 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
TRIO-209ENST00000507714 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
TRIO-209ENST00000507714 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
TRIO-209ENST00000507714 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
TRIO-209ENST00000507714 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
TRIO-209ENST00000507714 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
TRIO-209ENST00000507714 COL16A1Q07092 1604 aaPredicted RBP12.3□□□□□ -0.44
TRIO-209ENST00000507714 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms