RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
NIPBL-205ENST00000505998 ZBTB3Q9H5J0 574 aa11.96□□□□□ -0.49
NIPBL-205ENST00000505998 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
NIPBL-205ENST00000505998 QPCTQ16769 361 aa11.95□□□□□ -0.5
NIPBL-205ENST00000505998 IL21Q9HBE4 155 aa11.95□□□□□ -0.5
NIPBL-205ENST00000505998 HRCP23327 699 aa11.94□□□□□ -0.5
NIPBL-205ENST00000505998 MTMR2Q13614 643 aa11.94□□□□□ -0.5
NIPBL-205ENST00000505998 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
NIPBL-205ENST00000505998 LILRB3O75022 631 aa11.93□□□□□ -0.5
NIPBL-205ENST00000505998 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
NIPBL-205ENST00000505998 TJAP1Q5JTD0 557 aa11.93□□□□□ -0.5
NIPBL-205ENST00000505998 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
NIPBL-205ENST00000505998 SPDYE5A6NIY4 337 aa11.92□□□□□ -0.5
NIPBL-205ENST00000505998 RNF19BQ6ZMZ0 732 aa11.92□□□□□ -0.5
NIPBL-205ENST00000505998 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
NIPBL-205ENST00000505998 ZPR1O75312 459 aa11.91□□□□□ -0.5
NIPBL-205ENST00000505998 PPP2R2DQ66LE6 453 aa11.91□□□□□ -0.5
NIPBL-205ENST00000505998 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
NIPBL-205ENST00000505998 RETREG3Q86VR2 466 aa11.9□□□□□ -0.5
NIPBL-205ENST00000505998 ZNF516Q92618 1163 aa11.9□□□□□ -0.5
NIPBL-205ENST00000505998 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
NIPBL-205ENST00000505998 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
NIPBL-205ENST00000505998 THAP11Q96EK4 314 aa11.89□□□□□ -0.51
NIPBL-205ENST00000505998 SPSB2Q99619 263 aa11.89□□□□□ -0.51
NIPBL-205ENST00000505998 RFC5P40937 340 aa11.88□□□□□ -0.51
NIPBL-205ENST00000505998 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
NIPBL-205ENST00000505998 USB1Q9BQ65 265 aaKnown RBP11.88□□□□□ -0.51
NIPBL-205ENST00000505998 TLL1O43897 1013 aa11.87□□□□□ -0.51
NIPBL-205ENST00000505998 KCNC4Q03721 635 aa11.87□□□□□ -0.51
NIPBL-205ENST00000505998 PRR7Q8TB68 274 aa11.87□□□□□ -0.51
NIPBL-205ENST00000505998 ADH1BP00325 375 aa11.86□□□□□ -0.51
NIPBL-205ENST00000505998 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
NIPBL-205ENST00000505998 TSC1Q92574 1164 aa11.85□□□□□ -0.51
NIPBL-205ENST00000505998 CFAP99D6REC4 459 aa11.83□□□□□ -0.52
NIPBL-205ENST00000505998 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
NIPBL-205ENST00000505998 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
NIPBL-205ENST00000505998 AP1G2O75843 785 aa11.82□□□□□ -0.52
NIPBL-205ENST00000505998 MSS51Q4VC12 460 aa11.82□□□□□ -0.52
NIPBL-205ENST00000505998 FAM160A2Q8N612 972 aaPredicted RBP11.81□□□□□ -0.52
NIPBL-205ENST00000505998 NKX2-3Q8TAU0 364 aa11.81□□□□□ -0.52
NIPBL-205ENST00000505998 SLC6A16Q9GZN6 736 aa11.8□□□□□ -0.52
NIPBL-205ENST00000505998 DESI1Q6ICB0 168 aa11.79□□□□□ -0.52
NIPBL-205ENST00000505998 JUNDP17535 347 aa11.78□□□□□ -0.52
NIPBL-205ENST00000505998 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
NIPBL-205ENST00000505998 PRDM9Q9NQV7 894 aa11.77□□□□□ -0.53
NIPBL-205ENST00000505998 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
NIPBL-205ENST00000505998 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
NIPBL-205ENST00000505998 S1PR4O95977 384 aa11.75□□□□□ -0.53
NIPBL-205ENST00000505998 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
NIPBL-205ENST00000505998 MMP16P51512 607 aa11.75□□□□□ -0.53
NIPBL-205ENST00000505998 FLIIQ13045 1269 aa11.75□□□□□ -0.53
NIPBL-205ENST00000505998 DXOO77932 396 aaKnown RBP11.74□□□□□ -0.53
NIPBL-205ENST00000505998 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
NIPBL-205ENST00000505998 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
NIPBL-205ENST00000505998 GGCXP38435 758 aa11.72□□□□□ -0.53
NIPBL-205ENST00000505998 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
NIPBL-205ENST00000505998 PTPRNQ16849 979 aa11.71□□□□□ -0.53
NIPBL-205ENST00000505998 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
NIPBL-205ENST00000505998 SNRKQ9NRH2 765 aa11.71□□□□□ -0.53
NIPBL-205ENST00000505998 MCM6Q14566 821 aa11.7□□□□□ -0.54
NIPBL-205ENST00000505998 LRRN4Q8WUT4 740 aa11.7□□□□□ -0.54
NIPBL-205ENST00000505998 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
NIPBL-205ENST00000505998 CCNYL3P0C7X3 344 aa11.68□□□□□ -0.54
NIPBL-205ENST00000505998 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
NIPBL-205ENST00000505998 APBB1O00213 710 aa11.67□□□□□ -0.54
NIPBL-205ENST00000505998 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
NIPBL-205ENST00000505998 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.67□□□□□ -0.54
NIPBL-205ENST00000505998 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
NIPBL-205ENST00000505998 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
NIPBL-205ENST00000505998 CTHP32929 405 aa11.66□□□□□ -0.54
NIPBL-205ENST00000505998 MTMR14Q8NCE2 650 aa11.66□□□□□ -0.54
NIPBL-205ENST00000505998 RNF223E7ERA6 249 aa11.65□□□□□ -0.54
NIPBL-205ENST00000505998 SOCS7O14512 581 aa11.65□□□□□ -0.54
NIPBL-205ENST00000505998 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
NIPBL-205ENST00000505998 EVA1BQ9NVM1 165 aa11.64□□□□□ -0.55
NIPBL-205ENST00000505998 F12P00748 615 aaPredicted RBP11.63□□□□□ -0.55
NIPBL-205ENST00000505998 KCNH2Q12809 1159 aa11.63□□□□□ -0.55
NIPBL-205ENST00000505998 ANKLE1Q8NAG6 615 aa11.63□□□□□ -0.55
NIPBL-205ENST00000505998 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
NIPBL-205ENST00000505998 NR6A1Q15406 480 aa11.62□□□□□ -0.55
NIPBL-205ENST00000505998 PRM3Q9NNZ6 103 aa11.62□□□□□ -0.55
NIPBL-205ENST00000505998 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
NIPBL-205ENST00000505998 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
NIPBL-205ENST00000505998 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
NIPBL-205ENST00000505998 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
NIPBL-205ENST00000505998 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
NIPBL-205ENST00000505998 A0A0G2JS52 829 aa11.59□□□□□ -0.55
NIPBL-205ENST00000505998 EPS8L1Q8TE68 723 aa11.59□□□□□ -0.55
NIPBL-205ENST00000505998 ZBTB24O43167 697 aaPredicted RBP11.58□□□□□ -0.56
NIPBL-205ENST00000505998 RAD21O60216 631 aa11.58□□□□□ -0.56
NIPBL-205ENST00000505998 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
NIPBL-205ENST00000505998 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
NIPBL-205ENST00000505998 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
NIPBL-205ENST00000505998 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
NIPBL-205ENST00000505998 PLA2G2CQ5R387 149 aa11.56□□□□□ -0.56
NIPBL-205ENST00000505998 ARMC2Q8NEN0 867 aa11.56□□□□□ -0.56
NIPBL-205ENST00000505998 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
NIPBL-205ENST00000505998 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
NIPBL-205ENST00000505998 POM121Q96HA1 1249 aa11.54□□□□□ -0.56
NIPBL-205ENST00000505998 GDPD2Q9HCC8 539 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms