RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TECPR2O15040 1411 aa20.73■□□□□ 0.91
HOXC9-202ENST00000504557 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
HOXC9-202ENST00000504557 ORAI2Q96SN7 254 aa20.72■□□□□ 0.91
HOXC9-202ENST00000504557 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
HOXC9-202ENST00000504557 RGPD8O14715 1765 aaPredicted RBP20.7■□□□□ 0.9
HOXC9-202ENST00000504557 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
HOXC9-202ENST00000504557 SHPRHQ149N8 1683 aa20.69■□□□□ 0.9
HOXC9-202ENST00000504557 NUTM2BA6NNL0 878 aaPredicted RBP20.68■□□□□ 0.9
HOXC9-202ENST00000504557 NUTM2EB1AL46 878 aaPredicted RBP20.68■□□□□ 0.9
HOXC9-202ENST00000504557 ESCO1Q5FWF5 840 aa20.68■□□□□ 0.9
HOXC9-202ENST00000504557 NUTM2AQ8IVF1 878 aaPredicted RBP20.68■□□□□ 0.9
HOXC9-202ENST00000504557 PRAM1Q96QH2 718 aa20.68■□□□□ 0.9
HOXC9-202ENST00000504557 POGKQ9P215 609 aa20.68■□□□□ 0.9
HOXC9-202ENST00000504557 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
HOXC9-202ENST00000504557 NEUROD1Q13562 356 aa20.67■□□□□ 0.9
HOXC9-202ENST00000504557 ADGRB1O14514 1584 aa20.67■□□□□ 0.9
HOXC9-202ENST00000504557 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
HOXC9-202ENST00000504557 MEX3CQ5U5Q3 659 aaKnown RBP20.66■□□□□ 0.9
HOXC9-202ENST00000504557 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
HOXC9-202ENST00000504557 LRP6O75581 1613 aa20.64■□□□□ 0.89
HOXC9-202ENST00000504557 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
HOXC9-202ENST00000504557 LRRC59Q96AG4 307 aaKnown RBP20.62■□□□□ 0.89
HOXC9-202ENST00000504557 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
HOXC9-202ENST00000504557 DLC1Q96QB1 1528 aa20.62■□□□□ 0.89
HOXC9-202ENST00000504557 ARHGEF28Q8N1W1 1705 aaKnown RBP20.61■□□□□ 0.89
HOXC9-202ENST00000504557 SPATA31A6Q5VVP1 1343 aa20.61■□□□□ 0.89
HOXC9-202ENST00000504557 MINK1Q8N4C8 1332 aaPredicted RBP20.61■□□□□ 0.89
HOXC9-202ENST00000504557 STAC3Q96MF2 364 aa20.61■□□□□ 0.89
HOXC9-202ENST00000504557 RGS17Q9UGC6 210 aaPredicted RBP20.61■□□□□ 0.89
HOXC9-202ENST00000504557 SIRT1Q96EB6 747 aa20.6■□□□□ 0.89
HOXC9-202ENST00000504557 FOXO3O43524 673 aa20.59■□□□□ 0.89
HOXC9-202ENST00000504557 KIAA1210Q9ULL0 1709 aa20.58■□□□□ 0.89
HOXC9-202ENST00000504557 SOCS7O14512 581 aa20.57■□□□□ 0.88
HOXC9-202ENST00000504557 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
HOXC9-202ENST00000504557 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
HOXC9-202ENST00000504557 KIF1AQ12756 1690 aa20.56■□□□□ 0.88
HOXC9-202ENST00000504557 NPHP3Q7Z494 1330 aa20.55■□□□□ 0.88
HOXC9-202ENST00000504557 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
HOXC9-202ENST00000504557 POTEAQ6S8J7 498 aa20.55■□□□□ 0.88
HOXC9-202ENST00000504557 SOS2Q07890 1332 aaPredicted RBP20.54■□□□□ 0.88
HOXC9-202ENST00000504557 USP32Q8NFA0 1604 aa20.53■□□□□ 0.88
HOXC9-202ENST00000504557 PLEKHG5O94827 1062 aa20.53■□□□□ 0.88
HOXC9-202ENST00000504557 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
HOXC9-202ENST00000504557 PXDNQ92626 1479 aa20.52■□□□□ 0.88
HOXC9-202ENST00000504557 ADAMTS2O95450 1211 aa20.52■□□□□ 0.88
HOXC9-202ENST00000504557 PMFBP1Q8TBY8 1022 aa20.51■□□□□ 0.87
HOXC9-202ENST00000504557 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
HOXC9-202ENST00000504557 PHF8Q9UPP1 1060 aa20.51■□□□□ 0.87
HOXC9-202ENST00000504557 KRT28Q7Z3Y7 464 aa20.48■□□□□ 0.87
HOXC9-202ENST00000504557 TRPM1Q7Z4N2 1603 aa20.48■□□□□ 0.87
HOXC9-202ENST00000504557 WASLO00401 505 aaPredicted RBP20.47■□□□□ 0.87
HOXC9-202ENST00000504557 LMOD2Q6P5Q4 547 aa20.47■□□□□ 0.87
HOXC9-202ENST00000504557 AFF2P51816 1311 aa20.47■□□□□ 0.87
HOXC9-202ENST00000504557 COL22A1Q8NFW1 1626 aaPredicted RBP20.46■□□□□ 0.87
HOXC9-202ENST00000504557 QRICH2Q9H0J4 1663 aa20.46■□□□□ 0.87
HOXC9-202ENST00000504557 PSME1Q06323 249 aa20.46■□□□□ 0.87
HOXC9-202ENST00000504557 TULP4Q9NRJ4 1543 aa20.46■□□□□ 0.87
HOXC9-202ENST00000504557 ANKARQ7Z5J8 1434 aa20.45■□□□□ 0.86
HOXC9-202ENST00000504557 ITSN1Q15811 1721 aa20.45■□□□□ 0.86
HOXC9-202ENST00000504557 PRR36Q9H6K5 1346 aa20.45■□□□□ 0.86
HOXC9-202ENST00000504557 ZNF772Q68DY9 489 aaPredicted RBP20.44■□□□□ 0.86
HOXC9-202ENST00000504557 NGLY1Q96IV0 654 aa20.44■□□□□ 0.86
HOXC9-202ENST00000504557 EIF3AQ14152 1382 aaKnown RBP20.44■□□□□ 0.86
HOXC9-202ENST00000504557 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
HOXC9-202ENST00000504557 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
HOXC9-202ENST00000504557 CDK19Q9BWU1 502 aa20.42■□□□□ 0.86
HOXC9-202ENST00000504557 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
HOXC9-202ENST00000504557 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
HOXC9-202ENST00000504557 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
HOXC9-202ENST00000504557 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
HOXC9-202ENST00000504557 CENPJQ9HC77 1338 aaPredicted RBP20.4■□□□□ 0.86
HOXC9-202ENST00000504557 TNS3Q68CZ2 1445 aa20.39■□□□□ 0.85
HOXC9-202ENST00000504557 NBPF8Q3BBV2 869 aa20.39■□□□□ 0.85
HOXC9-202ENST00000504557 NUDT16Q96DE0 195 aaKnown RBP20.39■□□□□ 0.85
HOXC9-202ENST00000504557 ATP7BP35670 1465 aa20.38■□□□□ 0.85
HOXC9-202ENST00000504557 CABLES1Q8TDN4 633 aa20.38■□□□□ 0.85
HOXC9-202ENST00000504557 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
HOXC9-202ENST00000504557 TRPM3Q9HCF6 1732 aaPredicted RBP20.38■□□□□ 0.85
HOXC9-202ENST00000504557 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
HOXC9-202ENST00000504557 PAK3O75914 559 aaPredicted RBP20.37■□□□□ 0.85
HOXC9-202ENST00000504557 SRPK2P78362 688 aaKnown RBP20.37■□□□□ 0.85
HOXC9-202ENST00000504557 ABCA3Q99758 1704 aa20.36■□□□□ 0.85
HOXC9-202ENST00000504557 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
HOXC9-202ENST00000504557 RXRBP28702 533 aa20.35■□□□□ 0.85
HOXC9-202ENST00000504557 QTRT2Q9H974 415 aaKnown RBP20.35■□□□□ 0.85
HOXC9-202ENST00000504557 USP21Q9UK80 565 aa20.35■□□□□ 0.85
HOXC9-202ENST00000504557 CABP2Q9NPB3 220 aa20.34■□□□□ 0.85
HOXC9-202ENST00000504557 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
HOXC9-202ENST00000504557 ALS2Q96Q42 1657 aa20.32■□□□□ 0.84
HOXC9-202ENST00000504557 ARHGEF10O15013 1369 aa20.32■□□□□ 0.84
HOXC9-202ENST00000504557 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
HOXC9-202ENST00000504557 ACEP12821 1306 aa20.29■□□□□ 0.84
HOXC9-202ENST00000504557 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
HOXC9-202ENST00000504557 PLCH1Q4KWH8 1693 aa20.29■□□□□ 0.84
HOXC9-202ENST00000504557 PPIP5K1Q6PFW1 1433 aa20.28■□□□□ 0.84
HOXC9-202ENST00000504557 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
HOXC9-202ENST00000504557 EVC2Q86UK5 1308 aa20.27■□□□□ 0.83
HOXC9-202ENST00000504557 RALGAPBQ86X10 1494 aa20.26■□□□□ 0.83
HOXC9-202ENST00000504557 RBM6P78332 1123 aaKnown RBP20.26■□□□□ 0.83
HOXC9-202ENST00000504557 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms