RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
PDLIM1P4-201ENST00000504327 ANKLE1Q8NAG6 615 aa8.5□□□□□ -1.05
PDLIM1P4-201ENST00000504327 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
PDLIM1P4-201ENST00000504327 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
PDLIM1P4-201ENST00000504327 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 PLA2G2CQ5R387 149 aa8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 FAM117AQ9C073 453 aa8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 FCF1Q9Y324 198 aaKnown RBP8.48□□□□□ -1.05
PDLIM1P4-201ENST00000504327 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
PDLIM1P4-201ENST00000504327 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
PDLIM1P4-201ENST00000504327 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
PDLIM1P4-201ENST00000504327 PCDHB15Q9Y5E8 787 aa8.47□□□□□ -1.05
PDLIM1P4-201ENST00000504327 SPTLC1O15269 473 aa8.46□□□□□ -1.06
PDLIM1P4-201ENST00000504327 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
PDLIM1P4-201ENST00000504327 RIC3Q7Z5B4 369 aa8.46□□□□□ -1.06
PDLIM1P4-201ENST00000504327 PLEKHG3A1L390 1219 aa8.45□□□□□ -1.06
PDLIM1P4-201ENST00000504327 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
PDLIM1P4-201ENST00000504327 MMP16P51512 607 aa8.45□□□□□ -1.06
PDLIM1P4-201ENST00000504327 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1P4-201ENST00000504327 V9GY48 417 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1P4-201ENST00000504327 JUNDP17535 347 aa8.44□□□□□ -1.06
PDLIM1P4-201ENST00000504327 GJA5P36382 358 aa8.44□□□□□ -1.06
PDLIM1P4-201ENST00000504327 SLC19A1P41440 591 aa8.44□□□□□ -1.06
PDLIM1P4-201ENST00000504327 MTMR2Q13614 643 aa8.44□□□□□ -1.06
PDLIM1P4-201ENST00000504327 LIAT1Q6ZQX7 453 aa8.44□□□□□ -1.06
PDLIM1P4-201ENST00000504327 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
PDLIM1P4-201ENST00000504327 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P4-201ENST00000504327 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
PDLIM1P4-201ENST00000504327 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
PDLIM1P4-201ENST00000504327 HRCP23327 699 aa8.42□□□□□ -1.06
PDLIM1P4-201ENST00000504327 QPCTQ16769 361 aa8.42□□□□□ -1.06
PDLIM1P4-201ENST00000504327 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
PDLIM1P4-201ENST00000504327 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
PDLIM1P4-201ENST00000504327 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
PDLIM1P4-201ENST00000504327 CFAP99D6REC4 459 aa8.4□□□□□ -1.06
PDLIM1P4-201ENST00000504327 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
PDLIM1P4-201ENST00000504327 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
PDLIM1P4-201ENST00000504327 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
PDLIM1P4-201ENST00000504327 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
PDLIM1P4-201ENST00000504327 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
PDLIM1P4-201ENST00000504327 PRPF38BQ5VTL8 546 aaKnown RBP8.39□□□□□ -1.07
PDLIM1P4-201ENST00000504327 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
PDLIM1P4-201ENST00000504327 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
PDLIM1P4-201ENST00000504327 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 LILRB3O75022 631 aa8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1P4-201ENST00000504327 RPIAP49247 311 aa8.36□□□□□ -1.07
PDLIM1P4-201ENST00000504327 SKIV2LQ15477 1246 aaKnown RBP8.36□□□□□ -1.07
PDLIM1P4-201ENST00000504327 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1P4-201ENST00000504327 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
PDLIM1P4-201ENST00000504327 TSC1Q92574 1164 aa8.36□□□□□ -1.07
PDLIM1P4-201ENST00000504327 ZBTB24O43167 697 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1P4-201ENST00000504327 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
PDLIM1P4-201ENST00000504327 PTPRNQ16849 979 aa8.35□□□□□ -1.07
PDLIM1P4-201ENST00000504327 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1P4-201ENST00000504327 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
PDLIM1P4-201ENST00000504327 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
PDLIM1P4-201ENST00000504327 TRIM32Q13049 653 aa8.34□□□□□ -1.07
PDLIM1P4-201ENST00000504327 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
PDLIM1P4-201ENST00000504327 TNFRSF10AO00220 468 aa8.33□□□□□ -1.08
PDLIM1P4-201ENST00000504327 GFRA3O60609 400 aa8.33□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PTCRAQ6ISU1 281 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1P4-201ENST00000504327 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1P4-201ENST00000504327 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
PDLIM1P4-201ENST00000504327 FOXC1Q12948 553 aa8.31□□□□□ -1.08
PDLIM1P4-201ENST00000504327 LYPD8Q6UX82 237 aa8.31□□□□□ -1.08
PDLIM1P4-201ENST00000504327 GDF9O60383 454 aa8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 HELBQ8NG08 1087 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PKD2L1Q9P0L9 805 aa8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 MAP10Q9P2G4 905 aa8.3□□□□□ -1.08
PDLIM1P4-201ENST00000504327 NRG2O14511 850 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1P4-201ENST00000504327 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1P4-201ENST00000504327 CTHP32929 405 aa8.29□□□□□ -1.08
PDLIM1P4-201ENST00000504327 SKOR1P84550 965 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PRR20EP86478 221 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PRR20CP86479 221 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PRR20DP86480 221 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PRR20BP86481 221 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PRR20AP86496 221 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 LAPTM4AQ15012 233 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 GOPCQ9HD26 462 aa8.28□□□□□ -1.08
PDLIM1P4-201ENST00000504327 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
PDLIM1P4-201ENST00000504327 Q6ZNB5 142 aa8.27□□□□□ -1.09
PDLIM1P4-201ENST00000504327 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
PDLIM1P4-201ENST00000504327 WNT7AO00755 349 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms