RNA–Protein interactions for RNA: ENST00000503767.5

ATXN3-207, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-207ENST00000503767 HOXA2O43364 376 aa11.88□□□□□ -0.51
ATXN3-207ENST00000503767 HLA-CQ95604 372 aa11.88□□□□□ -0.51
ATXN3-207ENST00000503767 FAM187AA6NFU0 413 aa11.86□□□□□ -0.51
ATXN3-207ENST00000503767 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
ATXN3-207ENST00000503767 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
ATXN3-207ENST00000503767 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
ATXN3-207ENST00000503767 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
ATXN3-207ENST00000503767 FOXC1Q12948 553 aa11.85□□□□□ -0.51
ATXN3-207ENST00000503767 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
ATXN3-207ENST00000503767 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
ATXN3-207ENST00000503767 ZMYND10O75800 440 aa11.83□□□□□ -0.52
ATXN3-207ENST00000503767 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
ATXN3-207ENST00000503767 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
ATXN3-207ENST00000503767 ZBTB24O43167 697 aaPredicted RBP11.8□□□□□ -0.52
ATXN3-207ENST00000503767 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
ATXN3-207ENST00000503767 ZC3H15Q8WU90 426 aaKnown RBP11.8□□□□□ -0.52
ATXN3-207ENST00000503767 TRIM32Q13049 653 aa11.79□□□□□ -0.52
ATXN3-207ENST00000503767 AMHR2Q16671 573 aa11.78□□□□□ -0.52
ATXN3-207ENST00000503767 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
ATXN3-207ENST00000503767 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-207ENST00000503767 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.53
ATXN3-207ENST00000503767 WNT7AO00755 349 aa11.76□□□□□ -0.53
ATXN3-207ENST00000503767 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
ATXN3-207ENST00000503767 AVPP01185 164 aa11.76□□□□□ -0.53
ATXN3-207ENST00000503767 CYP4X1Q8N118 509 aa11.76□□□□□ -0.53
ATXN3-207ENST00000503767 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
ATXN3-207ENST00000503767 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
ATXN3-207ENST00000503767 POTECB2RU33 542 aa11.74□□□□□ -0.53
ATXN3-207ENST00000503767 JUNDP17535 347 aa11.74□□□□□ -0.53
ATXN3-207ENST00000503767 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
ATXN3-207ENST00000503767 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
ATXN3-207ENST00000503767 FDX1P10109 184 aa11.73□□□□□ -0.53
ATXN3-207ENST00000503767 SPIRE2Q8WWL2 714 aa11.73□□□□□ -0.53
ATXN3-207ENST00000503767 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.53
ATXN3-207ENST00000503767 ZNF775Q96BV0 537 aaPredicted RBP11.71□□□□□ -0.53
ATXN3-207ENST00000503767 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
ATXN3-207ENST00000503767 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
ATXN3-207ENST00000503767 MRGPRX2Q96LB1 330 aa11.69□□□□□ -0.54
ATXN3-207ENST00000503767 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-207ENST00000503767 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-207ENST00000503767 SKOR1P84550 965 aa11.68□□□□□ -0.54
ATXN3-207ENST00000503767 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
ATXN3-207ENST00000503767 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
ATXN3-207ENST00000503767 SMPD1P17405 629 aa11.67□□□□□ -0.54
ATXN3-207ENST00000503767 WNT7BP56706 349 aa11.67□□□□□ -0.54
ATXN3-207ENST00000503767 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
ATXN3-207ENST00000503767 NDUFV2P19404 249 aa11.66□□□□□ -0.54
ATXN3-207ENST00000503767 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
ATXN3-207ENST00000503767 DACH1Q9UI36 760 aa11.66□□□□□ -0.54
ATXN3-207ENST00000503767 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
ATXN3-207ENST00000503767 AXIN1O15169 862 aa11.65□□□□□ -0.54
ATXN3-207ENST00000503767 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
ATXN3-207ENST00000503767 TRIM66O15016 1216 aa11.64□□□□□ -0.55
ATXN3-207ENST00000503767 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
ATXN3-207ENST00000503767 PTCRAQ6ISU1 281 aaPredicted RBP11.64□□□□□ -0.55
ATXN3-207ENST00000503767 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
ATXN3-207ENST00000503767 J3QL48 77 aa11.62□□□□□ -0.55
ATXN3-207ENST00000503767 MS4A1P11836 297 aa11.61□□□□□ -0.55
ATXN3-207ENST00000503767 GJA5P36382 358 aa11.61□□□□□ -0.55
ATXN3-207ENST00000503767 AK7Q96M32 723 aa11.6□□□□□ -0.55
ATXN3-207ENST00000503767 TBC1D2Q9BYX2 928 aa11.6□□□□□ -0.55
ATXN3-207ENST00000503767 CCNYL3P0C7X3 344 aa11.6□□□□□ -0.55
ATXN3-207ENST00000503767 PTPRNQ16849 979 aa11.6□□□□□ -0.55
ATXN3-207ENST00000503767 SPDYE5A6NIY4 337 aa11.59□□□□□ -0.55
ATXN3-207ENST00000503767 MTMR2Q13614 643 aa11.59□□□□□ -0.55
ATXN3-207ENST00000503767 PRR7Q8TB68 274 aa11.59□□□□□ -0.55
ATXN3-207ENST00000503767 GMPR2Q9P2T1 348 aaKnown RBP11.59□□□□□ -0.55
ATXN3-207ENST00000503767 DESI1Q6ICB0 168 aa11.58□□□□□ -0.56
ATXN3-207ENST00000503767 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-207ENST00000503767 EVA1BQ9NVM1 165 aa11.58□□□□□ -0.56
ATXN3-207ENST00000503767 SIAH2O43255 324 aa11.57□□□□□ -0.56
ATXN3-207ENST00000503767 DIXDC1Q155Q3 683 aa11.57□□□□□ -0.56
ATXN3-207ENST00000503767 SPTLC1O15269 473 aa11.56□□□□□ -0.56
ATXN3-207ENST00000503767 HPS1Q92902 700 aa11.56□□□□□ -0.56
ATXN3-207ENST00000503767 SH3BP2P78314 561 aa11.55□□□□□ -0.56
ATXN3-207ENST00000503767 UNC93B1Q9H1C4 597 aa11.54□□□□□ -0.56
ATXN3-207ENST00000503767 PCDHB15Q9Y5E8 787 aa11.54□□□□□ -0.56
ATXN3-207ENST00000503767 KCNH2Q12809 1159 aa11.53□□□□□ -0.56
ATXN3-207ENST00000503767 LCE2AQ5TA79 106 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-207ENST00000503767 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
ATXN3-207ENST00000503767 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.57
ATXN3-207ENST00000503767 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.57
ATXN3-207ENST00000503767 ALDH1A1P00352 501 aa11.51□□□□□ -0.57
ATXN3-207ENST00000503767 PDE4DQ08499 809 aa11.51□□□□□ -0.57
ATXN3-207ENST00000503767 CFAP99D6REC4 459 aa11.5□□□□□ -0.57
ATXN3-207ENST00000503767 LYPD8Q6UX82 237 aa11.5□□□□□ -0.57
ATXN3-207ENST00000503767 HRCP23327 699 aa11.49□□□□□ -0.57
ATXN3-207ENST00000503767 PRPF38BQ5VTL8 546 aaKnown RBP11.48□□□□□ -0.57
ATXN3-207ENST00000503767 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
ATXN3-207ENST00000503767 RIC3Q7Z5B4 369 aa11.48□□□□□ -0.57
ATXN3-207ENST00000503767 BAP1Q92560 729 aa11.48□□□□□ -0.57
ATXN3-207ENST00000503767 ZBTB3Q9H5J0 574 aa11.48□□□□□ -0.57
ATXN3-207ENST00000503767 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
ATXN3-207ENST00000503767 ZNF511Q8NB15 262 aa11.47□□□□□ -0.57
ATXN3-207ENST00000503767 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
ATXN3-207ENST00000503767 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.57
ATXN3-207ENST00000503767 SNRPBP14678 240 aaKnown RBP11.45□□□□□ -0.58
ATXN3-207ENST00000503767 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
ATXN3-207ENST00000503767 CABLES1Q8TDN4 633 aa11.45□□□□□ -0.58
ATXN3-207ENST00000503767 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms