RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 BRINP3Q76B58 766 aa15.19■□□□□ 0.02
FXR1-222ENST00000498658 PHLPP1O60346 1717 aa15.18■□□□□ 0.02
FXR1-222ENST00000498658 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
FXR1-222ENST00000498658 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
FXR1-222ENST00000498658 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
FXR1-222ENST00000498658 CDC42BPGQ6DT37 1551 aa15.17■□□□□ 0.02
FXR1-222ENST00000498658 AHDC1Q5TGY3 1603 aaPredicted RBP15.17■□□□□ 0.02
FXR1-222ENST00000498658 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
FXR1-222ENST00000498658 C1orf167Q5SNV9 1468 aa15.16■□□□□ 0.02
FXR1-222ENST00000498658 POGKQ9P215 609 aa15.16■□□□□ 0.02
FXR1-222ENST00000498658 JCADQ9P266 1359 aa15.15■□□□□ 0.02
FXR1-222ENST00000498658 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
FXR1-222ENST00000498658 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
FXR1-222ENST00000498658 PRAM1Q96QH2 718 aa15.14■□□□□ 0.01
FXR1-222ENST00000498658 MED1Q15648 1581 aaPredicted RBP15.14■□□□□ 0.01
FXR1-222ENST00000498658 PLEKHH1Q9ULM0 1364 aa15.13■□□□□ 0.01
FXR1-222ENST00000498658 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
FXR1-222ENST00000498658 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
FXR1-222ENST00000498658 COL16A1Q07092 1604 aaPredicted RBP15.13■□□□□ 0.01
FXR1-222ENST00000498658 LRRC59Q96AG4 307 aaKnown RBP15.12■□□□□ 0.01
FXR1-222ENST00000498658 TRAK1Q9UPV9 953 aa15.12■□□□□ 0.01
FXR1-222ENST00000498658 NHSL1Q5SYE7 1610 aa15.11■□□□□ 0.01
FXR1-222ENST00000498658 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
FXR1-222ENST00000498658 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
FXR1-222ENST00000498658 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
FXR1-222ENST00000498658 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
FXR1-222ENST00000498658 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
FXR1-222ENST00000498658 NPHP3Q7Z494 1330 aa15.09■□□□□ 0.01
FXR1-222ENST00000498658 FMN2Q9NZ56 1722 aa15.09■□□□□ 0.01
FXR1-222ENST00000498658 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
FXR1-222ENST00000498658 ADGRB2O60241 1585 aa15.07■□□□□ 0
FXR1-222ENST00000498658 SHPRHQ149N8 1683 aa15.07■□□□□ 0
FXR1-222ENST00000498658 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
FXR1-222ENST00000498658 TONSLQ96HA7 1378 aa15.07■□□□□ 0
FXR1-222ENST00000498658 NUTM2FA1L443 756 aa15.05■□□□□ -0
FXR1-222ENST00000498658 ANKARQ7Z5J8 1434 aa15.05■□□□□ -0
FXR1-222ENST00000498658 KIF1AQ12756 1690 aa15.05■□□□□ -0
FXR1-222ENST00000498658 ARHGEF28Q8N1W1 1705 aaKnown RBP15.05■□□□□ -0
FXR1-222ENST00000498658 MINK1Q8N4C8 1332 aaPredicted RBP15.04■□□□□ -0
FXR1-222ENST00000498658 WASLO00401 505 aaPredicted RBP15.04■□□□□ -0
FXR1-222ENST00000498658 NBPF1Q3BBV0 1214 aa15.04■□□□□ -0
FXR1-222ENST00000498658 DDX17Q92841 729 aaKnown RBP15.04■□□□□ -0
FXR1-222ENST00000498658 FOXO3O43524 673 aa15.03■□□□□ -0
FXR1-222ENST00000498658 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
FXR1-222ENST00000498658 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
FXR1-222ENST00000498658 HIRIP3Q9BW71 556 aaPredicted RBP15.02■□□□□ -0
FXR1-222ENST00000498658 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
FXR1-222ENST00000498658 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
FXR1-222ENST00000498658 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
FXR1-222ENST00000498658 PSME1Q06323 249 aa15.01□□□□□ -0.01
FXR1-222ENST00000498658 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
FXR1-222ENST00000498658 PNPLA6Q8IY17 1366 aa15□□□□□ -0.01
FXR1-222ENST00000498658 CENPJQ9HC77 1338 aaPredicted RBP15□□□□□ -0.01
FXR1-222ENST00000498658 TULP4Q9NRJ4 1543 aa15□□□□□ -0.01
FXR1-222ENST00000498658 RGPD8O14715 1765 aaPredicted RBP14.99□□□□□ -0.01
FXR1-222ENST00000498658 PXDNQ92626 1479 aa14.99□□□□□ -0.01
FXR1-222ENST00000498658 NUTM2BA6NNL0 878 aaPredicted RBP14.98□□□□□ -0.01
FXR1-222ENST00000498658 NUTM2EB1AL46 878 aaPredicted RBP14.98□□□□□ -0.01
FXR1-222ENST00000498658 ILDR2Q71H61 639 aa14.98□□□□□ -0.01
FXR1-222ENST00000498658 KRT28Q7Z3Y7 464 aa14.98□□□□□ -0.01
FXR1-222ENST00000498658 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
FXR1-222ENST00000498658 ZNF772Q68DY9 489 aaPredicted RBP14.97□□□□□ -0.01
FXR1-222ENST00000498658 CDK19Q9BWU1 502 aa14.97□□□□□ -0.01
FXR1-222ENST00000498658 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
FXR1-222ENST00000498658 GPRASP1Q5JY77 1395 aa14.97□□□□□ -0.01
FXR1-222ENST00000498658 LRP6O75581 1613 aa14.96□□□□□ -0.01
FXR1-222ENST00000498658 USP32Q8NFA0 1604 aa14.96□□□□□ -0.01
FXR1-222ENST00000498658 SPATA31A3Q5VYP0 1347 aa14.95□□□□□ -0.02
FXR1-222ENST00000498658 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
FXR1-222ENST00000498658 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
FXR1-222ENST00000498658 NBPF8Q3BBV2 869 aa14.95□□□□□ -0.02
FXR1-222ENST00000498658 PMFBP1Q8TBY8 1022 aa14.95□□□□□ -0.02
FXR1-222ENST00000498658 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
FXR1-222ENST00000498658 RGS17Q9UGC6 210 aaPredicted RBP14.95□□□□□ -0.02
FXR1-222ENST00000498658 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
FXR1-222ENST00000498658 SBNO1A3KN83 1393 aa14.95□□□□□ -0.02
FXR1-222ENST00000498658 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
FXR1-222ENST00000498658 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
FXR1-222ENST00000498658 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
FXR1-222ENST00000498658 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
FXR1-222ENST00000498658 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
FXR1-222ENST00000498658 SRPK2P78362 688 aaKnown RBP14.93□□□□□ -0.02
FXR1-222ENST00000498658 ARHGEF10O15013 1369 aa14.93□□□□□ -0.02
FXR1-222ENST00000498658 ATP7BP35670 1465 aa14.93□□□□□ -0.02
FXR1-222ENST00000498658 QRICH2Q9H0J4 1663 aa14.93□□□□□ -0.02
FXR1-222ENST00000498658 EVC2Q86UK5 1308 aa14.92□□□□□ -0.02
FXR1-222ENST00000498658 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
FXR1-222ENST00000498658 SOCS7O14512 581 aa14.91□□□□□ -0.02
FXR1-222ENST00000498658 PLEKHG3A1L390 1219 aa14.9□□□□□ -0.02
FXR1-222ENST00000498658 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
FXR1-222ENST00000498658 ADAMTS2O95450 1211 aa14.9□□□□□ -0.02
FXR1-222ENST00000498658 NGLY1Q96IV0 654 aa14.9□□□□□ -0.02
FXR1-222ENST00000498658 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
FXR1-222ENST00000498658 SBNO2Q9Y2G9 1366 aa14.89□□□□□ -0.03
FXR1-222ENST00000498658 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
FXR1-222ENST00000498658 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
FXR1-222ENST00000498658 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
FXR1-222ENST00000498658 POTEAQ6S8J7 498 aa14.88□□□□□ -0.03
FXR1-222ENST00000498658 AFF2P51816 1311 aa14.88□□□□□ -0.03
FXR1-222ENST00000498658 TOPAZ1Q8N9V7 1692 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms