RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
PBX1-211ENST00000498497 TMEM63CQ9P1W3 806 aa14.29□□□□□ -0.12
PBX1-211ENST00000498497 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
PBX1-211ENST00000498497 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
PBX1-211ENST00000498497 RLBP1P12271 317 aa14.28□□□□□ -0.12
PBX1-211ENST00000498497 GTF2A1P52655 376 aaPredicted RBP14.28□□□□□ -0.12
PBX1-211ENST00000498497 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
PBX1-211ENST00000498497 C16orf45Q96MC5 204 aaPredicted RBP14.27□□□□□ -0.12
PBX1-211ENST00000498497 MTUS2Q5JR59 1369 aa14.27□□□□□ -0.13
PBX1-211ENST00000498497 GPT2Q8TD30 523 aa14.26□□□□□ -0.13
PBX1-211ENST00000498497 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
PBX1-211ENST00000498497 TRIM66O15016 1216 aa14.26□□□□□ -0.13
PBX1-211ENST00000498497 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
PBX1-211ENST00000498497 HNRNPH2P55795 449 aaKnown RBP14.26□□□□□ -0.13
PBX1-211ENST00000498497 SART3Q15020 963 aaKnown RBP14.26□□□□□ -0.13
PBX1-211ENST00000498497 NAIPQ13075 1403 aa14.26□□□□□ -0.13
PBX1-211ENST00000498497 HS1BP3Q53T59 392 aa14.25□□□□□ -0.13
PBX1-211ENST00000498497 GTF3C6Q969F1 213 aa14.25□□□□□ -0.13
PBX1-211ENST00000498497 OGFRQ9NZT2 677 aa14.25□□□□□ -0.13
PBX1-211ENST00000498497 FEZ2Q9UHY8 353 aaPredicted RBP14.25□□□□□ -0.13
PBX1-211ENST00000498497 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
PBX1-211ENST00000498497 TERF2Q15554 542 aa14.25□□□□□ -0.13
PBX1-211ENST00000498497 NEK11Q8NG66 645 aa14.25□□□□□ -0.13
PBX1-211ENST00000498497 POLR3GO15318 223 aaPredicted RBP14.24□□□□□ -0.13
PBX1-211ENST00000498497 BANK1Q8NDB2 785 aa14.24□□□□□ -0.13
PBX1-211ENST00000498497 DRC1Q96MC2 740 aa14.24□□□□□ -0.13
PBX1-211ENST00000498497 FAM212AQ96EL1 285 aa14.23□□□□□ -0.13
PBX1-211ENST00000498497 TIAM1Q13009 1591 aa14.23□□□□□ -0.13
PBX1-211ENST00000498497 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
PBX1-211ENST00000498497 CALCOCO1Q9P1Z2 691 aa14.23□□□□□ -0.13
PBX1-211ENST00000498497 PYCARDQ9ULZ3 195 aa14.23□□□□□ -0.13
PBX1-211ENST00000498497 NCBP1Q09161 790 aaKnown RBP14.22□□□□□ -0.13
PBX1-211ENST00000498497 DTNBO60941 627 aa14.22□□□□□ -0.13
PBX1-211ENST00000498497 ZNF445P59923 1031 aa14.22□□□□□ -0.13
PBX1-211ENST00000498497 E2F4Q16254 413 aa14.22□□□□□ -0.13
PBX1-211ENST00000498497 ZGPATQ8N5A5 531 aaKnown RBP14.22□□□□□ -0.13
PBX1-211ENST00000498497 PIBF1Q8WXW3 757 aa14.22□□□□□ -0.13
PBX1-211ENST00000498497 LMBRD1Q9NUN5 540 aa14.22□□□□□ -0.13
PBX1-211ENST00000498497 K7ELQ4 463 aaPredicted RBP14.21□□□□□ -0.13
PBX1-211ENST00000498497 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
PBX1-211ENST00000498497 CGNL1Q0VF96 1302 aa14.21□□□□□ -0.13
PBX1-211ENST00000498497 ADCY5O95622 1261 aa14.21□□□□□ -0.14
PBX1-211ENST00000498497 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.14
PBX1-211ENST00000498497 SMC5Q8IY18 1101 aa14.21□□□□□ -0.14
PBX1-211ENST00000498497 SPATA31E1Q6ZUB1 1445 aa14.2□□□□□ -0.14
PBX1-211ENST00000498497 MCM5P33992 734 aa14.2□□□□□ -0.14
PBX1-211ENST00000498497 SKIDA1Q1XH10 827 aa14.2□□□□□ -0.14
PBX1-211ENST00000498497 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 PSEN1P49768 467 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 SLFN5Q08AF3 891 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 RWDD1Q9H446 243 aaPredicted RBP14.19□□□□□ -0.14
PBX1-211ENST00000498497 CTNNA3Q9UI47 895 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 ANKRD65E5RJM6 399 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
PBX1-211ENST00000498497 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
PBX1-211ENST00000498497 DNAJC21Q5F1R6 531 aaKnown RBP14.19□□□□□ -0.14
PBX1-211ENST00000498497 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
PBX1-211ENST00000498497 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
PBX1-211ENST00000498497 DIAPH3Q9NSV4 1193 aa14.18□□□□□ -0.14
PBX1-211ENST00000498497 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
PBX1-211ENST00000498497 TSPY26PQ9H489 355 aa14.18□□□□□ -0.14
PBX1-211ENST00000498497 GABPB1Q06547 395 aaPredicted RBP14.17□□□□□ -0.14
PBX1-211ENST00000498497 STK26Q9P289 416 aa14.17□□□□□ -0.14
PBX1-211ENST00000498497 FHOD3Q2V2M9 1422 aa14.17□□□□□ -0.14
PBX1-211ENST00000498497 DDIT3P35638 169 aa14.17□□□□□ -0.14
PBX1-211ENST00000498497 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
PBX1-211ENST00000498497 KRT222Q8N1A0 295 aa14.17□□□□□ -0.14
PBX1-211ENST00000498497 CLGNO14967 610 aa14.16□□□□□ -0.14
PBX1-211ENST00000498497 SIRT1Q96EB6 747 aa14.16□□□□□ -0.14
PBX1-211ENST00000498497 FEZ1Q99689 392 aa14.16□□□□□ -0.14
PBX1-211ENST00000498497 LCMT1Q9UIC8 334 aa14.16□□□□□ -0.14
PBX1-211ENST00000498497 EIF3AQ14152 1382 aaKnown RBP14.16□□□□□ -0.14
PBX1-211ENST00000498497 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
PBX1-211ENST00000498497 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
PBX1-211ENST00000498497 FKBP5Q13451 457 aaPredicted RBP14.15□□□□□ -0.14
PBX1-211ENST00000498497 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
PBX1-211ENST00000498497 ITPRIPQ8IWB1 547 aa14.15□□□□□ -0.14
PBX1-211ENST00000498497 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
PBX1-211ENST00000498497 SYT10Q6XYQ8 523 aa14.15□□□□□ -0.14
PBX1-211ENST00000498497 SYTL4Q96C24 671 aaPredicted RBP14.15□□□□□ -0.14
PBX1-211ENST00000498497 BCORL1Q5H9F3 1711 aa14.14□□□□□ -0.15
PBX1-211ENST00000498497 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
PBX1-211ENST00000498497 DDX41Q9UJV9 622 aaKnown RBP14.14□□□□□ -0.15
PBX1-211ENST00000498497 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
PBX1-211ENST00000498497 ANKRD7Q92527 254 aa14.14□□□□□ -0.15
PBX1-211ENST00000498497 KIF18AQ8NI77 898 aa14.13□□□□□ -0.15
PBX1-211ENST00000498497 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
PBX1-211ENST00000498497 RASSF4Q9H2L5 321 aa14.13□□□□□ -0.15
PBX1-211ENST00000498497 LRMPQ12912 555 aa14.13□□□□□ -0.15
PBX1-211ENST00000498497 KIF16BQ96L93 1317 aa14.13□□□□□ -0.15
PBX1-211ENST00000498497 SMARCA5O60264 1052 aaPredicted RBP14.13□□□□□ -0.15
PBX1-211ENST00000498497 KRBA2Q6ZNG9 492 aa14.13□□□□□ -0.15
PBX1-211ENST00000498497 APBB1O00213 710 aa14.12□□□□□ -0.15
PBX1-211ENST00000498497 TULP2O00295 520 aa14.12□□□□□ -0.15
PBX1-211ENST00000498497 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
PBX1-211ENST00000498497 RTEL1-TNFRSF6BF6WH68 1400 aa14.11□□□□□ -0.15
PBX1-211ENST00000498497 DENND4BO75064 1496 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms