RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TULP4Q9NRJ4 1543 aa19.13■□□□□ 0.65
CPNE1-227ENST00000498056 TMEM94Q12767 1356 aa19.12■□□□□ 0.65
CPNE1-227ENST00000498056 EIF4G2P78344 907 aaKnown RBP eCLIP19.12■□□□□ 0.65
CPNE1-227ENST00000498056 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
CPNE1-227ENST00000498056 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-227ENST00000498056 RBM33Q96EV2 1170 aaKnown RBP19.11■□□□□ 0.65
CPNE1-227ENST00000498056 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
CPNE1-227ENST00000498056 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
CPNE1-227ENST00000498056 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-227ENST00000498056 TOPAZ1Q8N9V7 1692 aa19.09■□□□□ 0.65
CPNE1-227ENST00000498056 SBNO2Q9Y2G9 1366 aa19.08■□□□□ 0.65
CPNE1-227ENST00000498056 ST20-MTHFSA0A0A6YYL1 179 aa19.08■□□□□ 0.64
CPNE1-227ENST00000498056 USP32Q8NFA0 1604 aa19.07■□□□□ 0.64
CPNE1-227ENST00000498056 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-227ENST00000498056 MYOM1P52179 1685 aa19.07■□□□□ 0.64
CPNE1-227ENST00000498056 SIRT1Q96EB6 747 aa19.06■□□□□ 0.64
CPNE1-227ENST00000498056 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
CPNE1-227ENST00000498056 MSH6P52701 1360 aa19.05■□□□□ 0.64
CPNE1-227ENST00000498056 DCCP43146 1447 aa19.04■□□□□ 0.64
CPNE1-227ENST00000498056 DISP3Q9P2K9 1392 aa19.02■□□□□ 0.64
CPNE1-227ENST00000498056 IQSEC2Q5JU85 1478 aa19.01■□□□□ 0.63
CPNE1-227ENST00000498056 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
CPNE1-227ENST00000498056 TESK2Q96S53 571 aa19■□□□□ 0.63
CPNE1-227ENST00000498056 ATP7BP35670 1465 aa19■□□□□ 0.63
CPNE1-227ENST00000498056 EVC2Q86UK5 1308 aa18.99■□□□□ 0.63
CPNE1-227ENST00000498056 TMF1P82094 1093 aa18.98■□□□□ 0.63
CPNE1-227ENST00000498056 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
CPNE1-227ENST00000498056 SRPK2P78362 688 aaKnown RBP18.97■□□□□ 0.63
CPNE1-227ENST00000498056 ROBO1Q9Y6N7 1651 aa18.96■□□□□ 0.63
CPNE1-227ENST00000498056 MST1RQ04912 1400 aa18.96■□□□□ 0.63
CPNE1-227ENST00000498056 ANKARQ7Z5J8 1434 aa18.95■□□□□ 0.62
CPNE1-227ENST00000498056 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-227ENST00000498056 ATF3P18847 181 aa18.95■□□□□ 0.62
CPNE1-227ENST00000498056 C19orf44Q9H6X5 657 aa18.95■□□□□ 0.62
CPNE1-227ENST00000498056 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
CPNE1-227ENST00000498056 NUTM2FA1L443 756 aa18.94■□□□□ 0.62
CPNE1-227ENST00000498056 POLR3GLQ9BT43 218 aa18.94■□□□□ 0.62
CPNE1-227ENST00000498056 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
CPNE1-227ENST00000498056 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
CPNE1-227ENST00000498056 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
CPNE1-227ENST00000498056 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
CPNE1-227ENST00000498056 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
CPNE1-227ENST00000498056 CADPS2Q86UW7 1296 aa18.92■□□□□ 0.62
CPNE1-227ENST00000498056 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
CPNE1-227ENST00000498056 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
CPNE1-227ENST00000498056 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
CPNE1-227ENST00000498056 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
CPNE1-227ENST00000498056 PRR36Q9H6K5 1346 aa18.9■□□□□ 0.62
CPNE1-227ENST00000498056 CCDC7Q96M83 1385 aa18.9■□□□□ 0.62
CPNE1-227ENST00000498056 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.62
CPNE1-227ENST00000498056 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
CPNE1-227ENST00000498056 KIF7Q2M1P5 1343 aa18.89■□□□□ 0.61
CPNE1-227ENST00000498056 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
CPNE1-227ENST00000498056 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
CPNE1-227ENST00000498056 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-227ENST00000498056 NUDT16Q96DE0 195 aaKnown RBP18.86■□□□□ 0.61
CPNE1-227ENST00000498056 NINLQ9Y2I6 1382 aa18.85■□□□□ 0.61
CPNE1-227ENST00000498056 TRPM3Q9HCF6 1732 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-227ENST00000498056 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
CPNE1-227ENST00000498056 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-227ENST00000498056 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
CPNE1-227ENST00000498056 UBAP1LF5GYI3 381 aa18.82■□□□□ 0.6
CPNE1-227ENST00000498056 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
CPNE1-227ENST00000498056 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-227ENST00000498056 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
CPNE1-227ENST00000498056 TOM1O60784 492 aa18.81■□□□□ 0.6
CPNE1-227ENST00000498056 SLAIN2Q9P270 581 aa18.81■□□□□ 0.6
CPNE1-227ENST00000498056 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
CPNE1-227ENST00000498056 CD163L1Q9NR16 1453 aa18.81■□□□□ 0.6
CPNE1-227ENST00000498056 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
CPNE1-227ENST00000498056 PUS7Q96PZ0 661 aaKnown RBP18.8■□□□□ 0.6
CPNE1-227ENST00000498056 ORAI2Q96SN7 254 aa18.8■□□□□ 0.6
CPNE1-227ENST00000498056 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
CPNE1-227ENST00000498056 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
CPNE1-227ENST00000498056 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
CPNE1-227ENST00000498056 CABP1Q9NZU7 370 aa18.78■□□□□ 0.6
CPNE1-227ENST00000498056 PIK3C2AO00443 1686 aa18.78■□□□□ 0.6
CPNE1-227ENST00000498056 ALS2Q96Q42 1657 aa18.78■□□□□ 0.6
CPNE1-227ENST00000498056 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
CPNE1-227ENST00000498056 COL16A1Q07092 1604 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-227ENST00000498056 BRINP3Q76B58 766 aa18.77■□□□□ 0.6
CPNE1-227ENST00000498056 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-227ENST00000498056 NGDNQ8NEJ9 315 aaKnown RBP18.76■□□□□ 0.59
CPNE1-227ENST00000498056 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
CPNE1-227ENST00000498056 PXDNQ92626 1479 aa18.76■□□□□ 0.59
CPNE1-227ENST00000498056 ACEP12821 1306 aa18.75■□□□□ 0.59
CPNE1-227ENST00000498056 USP6P35125 1406 aa18.75■□□□□ 0.59
CPNE1-227ENST00000498056 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
CPNE1-227ENST00000498056 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
CPNE1-227ENST00000498056 CPSF1Q10570 1443 aaKnown RBP18.74■□□□□ 0.59
CPNE1-227ENST00000498056 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
CPNE1-227ENST00000498056 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
CPNE1-227ENST00000498056 HDGFL2Q7Z4V5 671 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-227ENST00000498056 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
CPNE1-227ENST00000498056 PLEKHG3A1L390 1219 aa18.73■□□□□ 0.59
CPNE1-227ENST00000498056 TERF2IPQ9NYB0 399 aa18.73■□□□□ 0.59
CPNE1-227ENST00000498056 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
CPNE1-227ENST00000498056 CRYBG1Q9Y4K1 1723 aa18.72■□□□□ 0.59
CPNE1-227ENST00000498056 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-227ENST00000498056 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms