RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 GORABQ5T7V8 394 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 ERBB4Q15303 1308 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 KIF16BQ96L93 1317 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 GOLGA6L3A6NEY3 463 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 RAB11FIP3O75154 756 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 ECEL1O95672 775 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 GTF2A1P52655 376 aaPredicted RBP6.3□□□□□ -1.4
CUL3-212ENST00000497715 PKD2Q13563 968 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
CUL3-212ENST00000497715 MAF1Q9H063 256 aa6.3□□□□□ -1.4
CUL3-212ENST00000497715 SKILP12757 684 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 FAM161AQ3B820 660 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 ARPC5LQ9BPX5 153 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 NOL10Q9BSC4 688 aaKnown RBP6.29□□□□□ -1.4
CUL3-212ENST00000497715 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 BIN2Q9UBW5 565 aaPredicted RBP6.29□□□□□ -1.4
CUL3-212ENST00000497715 NAT2P11245 290 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 PDE6BP35913 854 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 ZFYVE27Q5T4F4 411 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 TTC30AQ86WT1 665 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 TTC30BQ8N4P2 665 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 PRPF38AQ8NAV1 312 aaKnown RBP6.29□□□□□ -1.4
CUL3-212ENST00000497715 TMX4Q9H1E5 349 aaPredicted RBP6.29□□□□□ -1.4
CUL3-212ENST00000497715 EFCC1Q9HA90 598 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
CUL3-212ENST00000497715 PITPNM1O00562 1244 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 ANP32CO43423 234 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 FAM163BP0C2L3 166 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 SETDB1Q15047 1291 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 TNPO1Q92973 898 aaKnown RBP6.28□□□□□ -1.4
CUL3-212ENST00000497715 NUB1Q9Y5A7 615 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 IGHDP01880 384 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 NAP1L1P55209 391 aaKnown RBP6.28□□□□□ -1.4
CUL3-212ENST00000497715 RBM28Q9NW13 759 aaKnown RBP6.28□□□□□ -1.4
CUL3-212ENST00000497715 DONSONQ9NYP3 566 aa6.28□□□□□ -1.4
CUL3-212ENST00000497715 TULP2O00295 520 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 PES1O00541 588 aaKnown RBP6.27□□□□□ -1.41
CUL3-212ENST00000497715 UVSSAQ2YD98 709 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 LONRF3Q496Y0 759 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 MKL1Q969V6 931 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 KLHL42Q9P2K6 505 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 ZCCHC6Q5VYS8 1495 aaKnown RBP6.27□□□□□ -1.41
CUL3-212ENST00000497715 LMNB1P20700 586 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 PUS10Q3MIT2 529 aaKnown RBP6.27□□□□□ -1.41
CUL3-212ENST00000497715 LRCH2Q5VUJ6 765 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 PAIP2Q9BPZ3 127 aaKnown RBP6.27□□□□□ -1.41
CUL3-212ENST00000497715 PUF60Q9UHX1 559 aaKnown RBP6.27□□□□□ -1.41
CUL3-212ENST00000497715 ZNF232Q9UNY5 417 aa6.27□□□□□ -1.41
CUL3-212ENST00000497715 CAND2O75155 1236 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 U2AF1L5P0DN76 240 aaPredicted RBP6.26□□□□□ -1.41
CUL3-212ENST00000497715 U2AF1Q01081 240 aaKnown RBP eCLIP6.26□□□□□ -1.41
CUL3-212ENST00000497715 HDGFL1Q5TGJ6 251 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 ZNF771Q7L3S4 317 aaPredicted RBP6.26□□□□□ -1.41
CUL3-212ENST00000497715 MTERF4Q7Z6M4 381 aaKnown RBP6.26□□□□□ -1.41
CUL3-212ENST00000497715 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 TRERF1Q96PN7 1200 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 SUFUQ9UMX1 484 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 MORC1Q86VD1 984 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 PANK2Q9BZ23 570 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 TOMM22Q9NS69 142 aa6.26□□□□□ -1.41
CUL3-212ENST00000497715 ANKRD62A6NC57 917 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 KLHL33A6NCF5 533 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 SMAPO00193 183 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 NOP2P46087 812 aaKnown RBP6.25□□□□□ -1.41
CUL3-212ENST00000497715 NYAP1Q6ZVC0 841 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 ANKRD13AQ8IZ07 590 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 PHF8Q9UPP1 1060 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 FRAT2O75474 233 aaPredicted RBP6.25□□□□□ -1.41
CUL3-212ENST00000497715 TNNT3P45378 269 aaPredicted RBP6.25□□□□□ -1.41
CUL3-212ENST00000497715 MECOMQ03112 1051 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 B4GALNT3Q6L9W6 998 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 TIGD1Q96MW7 591 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 ANAPC4Q9UJX5 808 aa6.25□□□□□ -1.41
CUL3-212ENST00000497715 RGL2O15211 777 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 ABCD1P33897 745 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 INHBEP58166 350 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 L1TD1Q5T7N2 865 aaKnown RBP6.24□□□□□ -1.41
CUL3-212ENST00000497715 NBPF3Q9H094 633 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 TSPYL2Q9H2G4 693 aaPredicted RBP6.24□□□□□ -1.41
CUL3-212ENST00000497715 TPM3P06753 285 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 XRCC6P12956 609 aaKnown RBP eCLIP6.24□□□□□ -1.41
CUL3-212ENST00000497715 MKRN3Q13064 507 aaKnown RBP6.24□□□□□ -1.41
CUL3-212ENST00000497715 E2F5Q15329 346 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 ATP2B3Q16720 1220 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 CLEC4GQ6UXB4 293 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 FAM210AQ96ND0 272 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 PICK1Q9NRD5 415 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 POGKQ9P215 609 aa6.24□□□□□ -1.41
CUL3-212ENST00000497715 SH3BP5O60239 455 aa6.23□□□□□ -1.41
CUL3-212ENST00000497715 STK10O94804 968 aaKnown RBP6.23□□□□□ -1.41
CUL3-212ENST00000497715 IPO7O95373 1038 aaKnown RBP6.23□□□□□ -1.41
CUL3-212ENST00000497715 PPP2R5AQ15172 486 aa6.23□□□□□ -1.41
CUL3-212ENST00000497715 DUSP27Q5VZP5 1158 aa6.23□□□□□ -1.41
CUL3-212ENST00000497715 RPAINQ86UA6 219 aa6.23□□□□□ -1.41
CUL3-212ENST00000497715 PNISRQ8TF01 805 aaKnown RBP6.23□□□□□ -1.41
CUL3-212ENST00000497715 PMM1Q92871 262 aa6.23□□□□□ -1.41
CUL3-212ENST00000497715 RANBP17Q9H2T7 1088 aaKnown RBP6.23□□□□□ -1.41
CUL3-212ENST00000497715 RMI1Q9H9A7 625 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms