RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 POGKQ9P215 609 aa27.62■■■□□ 2.01
CTDSP1-213ENST00000496785 TRAK1Q9UPV9 953 aa27.61■■■□□ 2.01
CTDSP1-213ENST00000496785 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
CTDSP1-213ENST00000496785 PLEKHH1Q9ULM0 1364 aa27.6■■■□□ 2.01
CTDSP1-213ENST00000496785 C1orf167Q5SNV9 1468 aa27.57■■■□□ 2
CTDSP1-213ENST00000496785 BRINP3Q76B58 766 aa27.55■■■□□ 2
CTDSP1-213ENST00000496785 TRPM1Q7Z4N2 1603 aa27.52■■■□□ 2
CTDSP1-213ENST00000496785 SAFB2Q14151 953 aaKnown RBP eCLIP27.52■■■□□ 2
CTDSP1-213ENST00000496785 NBPF1Q3BBV0 1214 aa27.52■■■□□ 2
CTDSP1-213ENST00000496785 ARHGEF28Q8N1W1 1705 aaKnown RBP27.52■■■□□ 2
CTDSP1-213ENST00000496785 AHDC1Q5TGY3 1603 aaPredicted RBP27.52■■■□□ 2
CTDSP1-213ENST00000496785 PHLPP1O60346 1717 aa27.51■■□□□ 1.99
CTDSP1-213ENST00000496785 ADGRB2O60241 1585 aa27.51■■□□□ 1.99
CTDSP1-213ENST00000496785 ROCK2O75116 1388 aaKnown RBP27.5■■□□□ 1.99
CTDSP1-213ENST00000496785 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
CTDSP1-213ENST00000496785 EIF3AQ14152 1382 aaKnown RBP27.48■■□□□ 1.99
CTDSP1-213ENST00000496785 FMN2Q9NZ56 1722 aa27.48■■□□□ 1.99
CTDSP1-213ENST00000496785 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
CTDSP1-213ENST00000496785 MINK1Q8N4C8 1332 aaPredicted RBP27.44■■□□□ 1.98
CTDSP1-213ENST00000496785 NHSL1Q5SYE7 1610 aa27.44■■□□□ 1.98
CTDSP1-213ENST00000496785 COL16A1Q07092 1604 aaPredicted RBP27.43■■□□□ 1.98
CTDSP1-213ENST00000496785 NBPF8Q3BBV2 869 aa27.43■■□□□ 1.98
CTDSP1-213ENST00000496785 ESCO1Q5FWF5 840 aa27.43■■□□□ 1.98
CTDSP1-213ENST00000496785 ORAI2Q96SN7 254 aa27.43■■□□□ 1.98
CTDSP1-213ENST00000496785 GPRASP1Q5JY77 1395 aa27.43■■□□□ 1.98
CTDSP1-213ENST00000496785 ANKARQ7Z5J8 1434 aa27.42■■□□□ 1.98
CTDSP1-213ENST00000496785 JCADQ9P266 1359 aa27.42■■□□□ 1.98
CTDSP1-213ENST00000496785 RALGAPBQ86X10 1494 aa27.42■■□□□ 1.98
CTDSP1-213ENST00000496785 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
CTDSP1-213ENST00000496785 NUTM2FA1L443 756 aa27.4■■□□□ 1.98
CTDSP1-213ENST00000496785 HIRIP3Q9BW71 556 aaPredicted RBP27.4■■□□□ 1.98
CTDSP1-213ENST00000496785 WASLO00401 505 aaPredicted RBP27.39■■□□□ 1.98
CTDSP1-213ENST00000496785 KIF1AQ12756 1690 aa27.39■■□□□ 1.97
CTDSP1-213ENST00000496785 NPHP3Q7Z494 1330 aa27.39■■□□□ 1.97
CTDSP1-213ENST00000496785 TULP4Q9NRJ4 1543 aa27.37■■□□□ 1.97
CTDSP1-213ENST00000496785 LRRC59Q96AG4 307 aaKnown RBP27.37■■□□□ 1.97
CTDSP1-213ENST00000496785 CARD11Q9BXL7 1154 aa27.36■■□□□ 1.97
CTDSP1-213ENST00000496785 MED1Q15648 1581 aaPredicted RBP27.32■■□□□ 1.96
CTDSP1-213ENST00000496785 PHF8Q9UPP1 1060 aa27.32■■□□□ 1.96
CTDSP1-213ENST00000496785 QRICH2Q9H0J4 1663 aa27.32■■□□□ 1.96
CTDSP1-213ENST00000496785 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
CTDSP1-213ENST00000496785 SHPRHQ149N8 1683 aa27.31■■□□□ 1.96
CTDSP1-213ENST00000496785 SPATA31A6Q5VVP1 1343 aa27.31■■□□□ 1.96
CTDSP1-213ENST00000496785 DDX17Q92841 729 aaKnown RBP27.3■■□□□ 1.96
CTDSP1-213ENST00000496785 FOXO3O43524 673 aa27.29■■□□□ 1.96
CTDSP1-213ENST00000496785 USP32Q8NFA0 1604 aa27.29■■□□□ 1.96
CTDSP1-213ENST00000496785 DISP3Q9P2K9 1392 aa27.28■■□□□ 1.96
CTDSP1-213ENST00000496785 CDK19Q9BWU1 502 aa27.28■■□□□ 1.96
CTDSP1-213ENST00000496785 RGPD8O14715 1765 aaPredicted RBP27.27■■□□□ 1.96
CTDSP1-213ENST00000496785 ITSN1Q15811 1721 aa27.27■■□□□ 1.96
CTDSP1-213ENST00000496785 ATP7BP35670 1465 aa27.25■■□□□ 1.95
CTDSP1-213ENST00000496785 PXDNQ92626 1479 aa27.25■■□□□ 1.95
CTDSP1-213ENST00000496785 SBNO2Q9Y2G9 1366 aa27.24■■□□□ 1.95
CTDSP1-213ENST00000496785 EVC2Q86UK5 1308 aa27.24■■□□□ 1.95
CTDSP1-213ENST00000496785 PRR36Q9H6K5 1346 aa27.24■■□□□ 1.95
CTDSP1-213ENST00000496785 PSME1Q06323 249 aa27.24■■□□□ 1.95
CTDSP1-213ENST00000496785 NUDT16Q96DE0 195 aaKnown RBP27.24■■□□□ 1.95
CTDSP1-213ENST00000496785 SRPK2P78362 688 aaKnown RBP27.23■■□□□ 1.95
CTDSP1-213ENST00000496785 PNPLA6Q8IY17 1366 aa27.22■■□□□ 1.95
CTDSP1-213ENST00000496785 PHF23Q9BUL5 403 aaPredicted RBP27.22■■□□□ 1.95
CTDSP1-213ENST00000496785 KRT28Q7Z3Y7 464 aa27.21■■□□□ 1.95
CTDSP1-213ENST00000496785 PMFBP1Q8TBY8 1022 aa27.21■■□□□ 1.95
CTDSP1-213ENST00000496785 CCDC61Q9Y6R9 512 aa27.21■■□□□ 1.95
CTDSP1-213ENST00000496785 SLC24A1O60721 1099 aa27.2■■□□□ 1.94
CTDSP1-213ENST00000496785 XPCQ01831 940 aaPredicted RBP27.18■■□□□ 1.94
CTDSP1-213ENST00000496785 NGDNQ8NEJ9 315 aaKnown RBP27.18■■□□□ 1.94
CTDSP1-213ENST00000496785 SBNO1A3KN83 1393 aa27.17■■□□□ 1.94
CTDSP1-213ENST00000496785 TOPAZ1Q8N9V7 1692 aa27.17■■□□□ 1.94
CTDSP1-213ENST00000496785 MEX3CQ5U5Q3 659 aaKnown RBP27.15■■□□□ 1.94
CTDSP1-213ENST00000496785 TNS3Q68CZ2 1445 aa27.15■■□□□ 1.94
CTDSP1-213ENST00000496785 SPATA31A3Q5VYP0 1347 aa27.15■■□□□ 1.94
CTDSP1-213ENST00000496785 CABP2Q9NPB3 220 aa27.14■■□□□ 1.94
CTDSP1-213ENST00000496785 COL22A1Q8NFW1 1626 aaPredicted RBP27.14■■□□□ 1.94
CTDSP1-213ENST00000496785 PLEKHG3A1L390 1219 aa27.13■■□□□ 1.93
CTDSP1-213ENST00000496785 ARHGEF10O15013 1369 aa27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 ATAD2Q6PL18 1390 aa27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 NUTM2BA6NNL0 878 aaPredicted RBP27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 NUTM2EB1AL46 878 aaPredicted RBP27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 NUTM2AQ8IVF1 878 aaPredicted RBP27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 PPIP5K1Q6PFW1 1433 aa27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 LRP6O75581 1613 aa27.12■■□□□ 1.93
CTDSP1-213ENST00000496785 POLR3AO14802 1390 aaPredicted RBP27.11■■□□□ 1.93
CTDSP1-213ENST00000496785 USP47Q96K76 1375 aa27.11■■□□□ 1.93
CTDSP1-213ENST00000496785 ST20-MTHFSA0A0A6YYL1 179 aa27.08■■□□□ 1.93
CTDSP1-213ENST00000496785 ACEP12821 1306 aa27.08■■□□□ 1.93
CTDSP1-213ENST00000496785 LMOD2Q6P5Q4 547 aa27.06■■□□□ 1.92
CTDSP1-213ENST00000496785 TRPM3Q9HCF6 1732 aaPredicted RBP27.05■■□□□ 1.92
CTDSP1-213ENST00000496785 PUS7Q96PZ0 661 aaKnown RBP27.05■■□□□ 1.92
CTDSP1-213ENST00000496785 BRD4O60885 1362 aaPredicted RBP27.05■■□□□ 1.92
CTDSP1-213ENST00000496785 CABP1Q9NZU7 370 aa27.04■■□□□ 1.92
CTDSP1-213ENST00000496785 PAK3O75914 559 aaPredicted RBP27.03■■□□□ 1.92
CTDSP1-213ENST00000496785 TESK2Q96S53 571 aa27.02■■□□□ 1.92
CTDSP1-213ENST00000496785 HAP1P54257 671 aaPredicted RBP27.01■■□□□ 1.91
CTDSP1-213ENST00000496785 TMF1P82094 1093 aa27■■□□□ 1.91
CTDSP1-213ENST00000496785 ALS2Q96Q42 1657 aa27■■□□□ 1.91
CTDSP1-213ENST00000496785 ADAMTS2O95450 1211 aa26.99■■□□□ 1.91
CTDSP1-213ENST00000496785 ZNF772Q68DY9 489 aaPredicted RBP26.99■■□□□ 1.91
CTDSP1-213ENST00000496785 ZNF692Q9BU19 519 aaPredicted RBP26.99■■□□□ 1.91
CTDSP1-213ENST00000496785 CDCA8Q53HL2 280 aa26.97■■□□□ 1.91
CTDSP1-213ENST00000496785 C8orf37Q96NL8 207 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms