RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
CMSS1-208ENST00000496116 TULP4Q9NRJ4 1543 aa14.54□□□□□ -0.08
CMSS1-208ENST00000496116 SLFN5Q08AF3 891 aa14.54□□□□□ -0.08
CMSS1-208ENST00000496116 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.54□□□□□ -0.08
CMSS1-208ENST00000496116 ANKRD36BQ8N2N9 1353 aa14.54□□□□□ -0.08
CMSS1-208ENST00000496116 NSD2O96028 1365 aa14.53□□□□□ -0.08
CMSS1-208ENST00000496116 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
CMSS1-208ENST00000496116 APAF1O14727 1248 aa14.53□□□□□ -0.08
CMSS1-208ENST00000496116 PLIN1O60240 522 aa14.53□□□□□ -0.08
CMSS1-208ENST00000496116 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
CMSS1-208ENST00000496116 AGLP35573 1532 aa14.52□□□□□ -0.08
CMSS1-208ENST00000496116 E9PSI1 815 aa14.51□□□□□ -0.09
CMSS1-208ENST00000496116 TRMT2AQ8IZ69 625 aaKnown RBP14.51□□□□□ -0.09
CMSS1-208ENST00000496116 CRBNQ96SW2 442 aa14.51□□□□□ -0.09
CMSS1-208ENST00000496116 MSH5O43196 834 aa14.5□□□□□ -0.09
CMSS1-208ENST00000496116 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
CMSS1-208ENST00000496116 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
CMSS1-208ENST00000496116 NKTRP30414 1462 aaKnown RBP14.5□□□□□ -0.09
CMSS1-208ENST00000496116 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
CMSS1-208ENST00000496116 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
CMSS1-208ENST00000496116 SHPRHQ149N8 1683 aa14.49□□□□□ -0.09
CMSS1-208ENST00000496116 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
CMSS1-208ENST00000496116 TNNT2P45379 298 aaPredicted RBP14.48□□□□□ -0.09
CMSS1-208ENST00000496116 FBXO31Q5XUX0 539 aaPredicted RBP14.48□□□□□ -0.09
CMSS1-208ENST00000496116 STK26Q9P289 416 aa14.48□□□□□ -0.09
CMSS1-208ENST00000496116 YTHDC2Q9H6S0 1430 aaKnown RBP14.48□□□□□ -0.09
CMSS1-208ENST00000496116 SRPK2P78362 688 aaKnown RBP14.48□□□□□ -0.09
CMSS1-208ENST00000496116 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
CMSS1-208ENST00000496116 ATAD2Q6PL18 1390 aa14.48□□□□□ -0.09
CMSS1-208ENST00000496116 PTPRMP28827 1452 aa14.48□□□□□ -0.09
CMSS1-208ENST00000496116 CLTCQ00610 1675 aaKnown RBP14.47□□□□□ -0.09
CMSS1-208ENST00000496116 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
CMSS1-208ENST00000496116 POGKQ9P215 609 aa14.47□□□□□ -0.09
CMSS1-208ENST00000496116 MTHFSP49914 203 aa14.46□□□□□ -0.09
CMSS1-208ENST00000496116 ALKQ9UM73 1620 aa14.46□□□□□ -0.1
CMSS1-208ENST00000496116 ABCC11Q96J66 1382 aa14.45□□□□□ -0.1
CMSS1-208ENST00000496116 C20orf194Q5TEA3 1177 aa14.45□□□□□ -0.1
CMSS1-208ENST00000496116 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
CMSS1-208ENST00000496116 SPATA31D1Q6ZQQ2 1576 aa14.45□□□□□ -0.1
CMSS1-208ENST00000496116 A0A1W2PP64 1363 aa14.44□□□□□ -0.1
CMSS1-208ENST00000496116 MS4A1P11836 297 aa14.44□□□□□ -0.1
CMSS1-208ENST00000496116 ANP32AP39687 249 aaKnown RBP14.44□□□□□ -0.1
CMSS1-208ENST00000496116 WWC1Q8IX03 1113 aa14.44□□□□□ -0.1
CMSS1-208ENST00000496116 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
CMSS1-208ENST00000496116 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
CMSS1-208ENST00000496116 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
CMSS1-208ENST00000496116 MINK1Q8N4C8 1332 aaPredicted RBP14.42□□□□□ -0.1
CMSS1-208ENST00000496116 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
CMSS1-208ENST00000496116 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
CMSS1-208ENST00000496116 A2ML1A8K2U0 1454 aa14.41□□□□□ -0.1
CMSS1-208ENST00000496116 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
CMSS1-208ENST00000496116 ARHGEF40Q8TER5 1519 aa14.41□□□□□ -0.1
CMSS1-208ENST00000496116 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
CMSS1-208ENST00000496116 MED14O60244 1454 aa14.4□□□□□ -0.1
CMSS1-208ENST00000496116 DLC1Q96QB1 1528 aa14.4□□□□□ -0.1
CMSS1-208ENST00000496116 CCDC27Q2M243 656 aa14.4□□□□□ -0.1
CMSS1-208ENST00000496116 CENPQQ7L2Z9 268 aaPredicted RBP14.4□□□□□ -0.1
CMSS1-208ENST00000496116 HDGFL2Q7Z4V5 671 aaPredicted RBP14.4□□□□□ -0.1
CMSS1-208ENST00000496116 WDR63Q8IWG1 891 aa14.4□□□□□ -0.1
CMSS1-208ENST00000496116 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
CMSS1-208ENST00000496116 ESF1Q9H501 851 aaKnown RBP14.39□□□□□ -0.11
CMSS1-208ENST00000496116 MLECQ14165 292 aa14.39□□□□□ -0.11
CMSS1-208ENST00000496116 NEUROD2Q15784 382 aa14.39□□□□□ -0.11
CMSS1-208ENST00000496116 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
CMSS1-208ENST00000496116 DMRT2Q9Y5R5 561 aa14.39□□□□□ -0.11
CMSS1-208ENST00000496116 U2AF1L5P0DN76 240 aaPredicted RBP14.38□□□□□ -0.11
CMSS1-208ENST00000496116 U2AF1Q01081 240 aaKnown RBP eCLIP14.38□□□□□ -0.11
CMSS1-208ENST00000496116 KDM2BQ8NHM5 1336 aa14.38□□□□□ -0.11
CMSS1-208ENST00000496116 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
CMSS1-208ENST00000496116 BCAR3O75815 825 aa14.38□□□□□ -0.11
CMSS1-208ENST00000496116 PDE4AP27815 886 aa14.38□□□□□ -0.11
CMSS1-208ENST00000496116 CD163L1Q9NR16 1453 aa14.37□□□□□ -0.11
CMSS1-208ENST00000496116 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.37□□□□□ -0.11
CMSS1-208ENST00000496116 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
CMSS1-208ENST00000496116 NOP58Q9Y2X3 529 aaKnown RBP14.37□□□□□ -0.11
CMSS1-208ENST00000496116 RRP7AQ9Y3A4 280 aaKnown RBP14.37□□□□□ -0.11
CMSS1-208ENST00000496116 KIF13AQ9H1H9 1805 aa14.37□□□□□ -0.11
CMSS1-208ENST00000496116 PDE3AQ14432 1141 aa14.36□□□□□ -0.11
CMSS1-208ENST00000496116 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
CMSS1-208ENST00000496116 SETD1AO15047 1707 aaKnown RBP14.36□□□□□ -0.11
CMSS1-208ENST00000496116 FYB1O15117 783 aa14.36□□□□□ -0.11
CMSS1-208ENST00000496116 BACH2Q9BYV9 841 aa14.36□□□□□ -0.11
CMSS1-208ENST00000496116 ADGRB2O60241 1585 aa14.35□□□□□ -0.11
CMSS1-208ENST00000496116 CANXP27824 592 aaKnown RBP14.35□□□□□ -0.11
CMSS1-208ENST00000496116 KIF20BQ96Q89 1820 aa14.35□□□□□ -0.11
CMSS1-208ENST00000496116 HDGFP51858 240 aaKnown RBP14.35□□□□□ -0.11
CMSS1-208ENST00000496116 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
CMSS1-208ENST00000496116 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
CMSS1-208ENST00000496116 CABP1Q9NZU7 370 aa14.34□□□□□ -0.11
CMSS1-208ENST00000496116 ZMYM3Q14202 1370 aa14.34□□□□□ -0.11
CMSS1-208ENST00000496116 ATP7BP35670 1465 aa14.33□□□□□ -0.12
CMSS1-208ENST00000496116 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
CMSS1-208ENST00000496116 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
CMSS1-208ENST00000496116 COL3A1P02461 1466 aaPredicted RBP14.32□□□□□ -0.12
CMSS1-208ENST00000496116 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
CMSS1-208ENST00000496116 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
CMSS1-208ENST00000496116 WAPLQ7Z5K2 1190 aa14.31□□□□□ -0.12
CMSS1-208ENST00000496116 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
CMSS1-208ENST00000496116 NRXN3Q9Y4C0 1643 aa14.31□□□□□ -0.12
CMSS1-208ENST00000496116 AAMPQ13685 434 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms