RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 NBPF8Q3BBV2 869 aa19.51■□□□□ 0.71
FDPS-219ENST00000495308 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
FDPS-219ENST00000495308 CADPS2Q86UW7 1296 aa19.5■□□□□ 0.71
FDPS-219ENST00000495308 PRAM1Q96QH2 718 aa19.5■□□□□ 0.71
FDPS-219ENST00000495308 FMN2Q9NZ56 1722 aa19.49■□□□□ 0.71
FDPS-219ENST00000495308 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
FDPS-219ENST00000495308 SLAIN2Q9P270 581 aa19.49■□□□□ 0.71
FDPS-219ENST00000495308 MST1RQ04912 1400 aa19.49■□□□□ 0.71
FDPS-219ENST00000495308 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
FDPS-219ENST00000495308 RGPD8O14715 1765 aaPredicted RBP19.47■□□□□ 0.71
FDPS-219ENST00000495308 POGKQ9P215 609 aa19.46■□□□□ 0.71
FDPS-219ENST00000495308 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
FDPS-219ENST00000495308 ROCK2O75116 1388 aaKnown RBP19.45■□□□□ 0.7
FDPS-219ENST00000495308 ADGRB2O60241 1585 aa19.45■□□□□ 0.7
FDPS-219ENST00000495308 PHLPP1O60346 1717 aa19.45■□□□□ 0.7
FDPS-219ENST00000495308 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
FDPS-219ENST00000495308 HSPA1LP34931 641 aa19.44■□□□□ 0.7
FDPS-219ENST00000495308 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
FDPS-219ENST00000495308 NHSL1Q5SYE7 1610 aa19.41■□□□□ 0.7
FDPS-219ENST00000495308 HIRIP3Q9BW71 556 aaPredicted RBP19.41■□□□□ 0.7
FDPS-219ENST00000495308 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
FDPS-219ENST00000495308 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
FDPS-219ENST00000495308 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
FDPS-219ENST00000495308 NUTM2FA1L443 756 aa19.39■□□□□ 0.69
FDPS-219ENST00000495308 BRINP3Q76B58 766 aa19.39■□□□□ 0.69
FDPS-219ENST00000495308 AHDC1Q5TGY3 1603 aaPredicted RBP19.39■□□□□ 0.69
FDPS-219ENST00000495308 COL16A1Q07092 1604 aaPredicted RBP19.38■□□□□ 0.69
FDPS-219ENST00000495308 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
FDPS-219ENST00000495308 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
FDPS-219ENST00000495308 ORAI2Q96SN7 254 aa19.35■□□□□ 0.69
FDPS-219ENST00000495308 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
FDPS-219ENST00000495308 KIF1AQ12756 1690 aa19.34■□□□□ 0.69
FDPS-219ENST00000495308 TULP4Q9NRJ4 1543 aa19.34■□□□□ 0.69
FDPS-219ENST00000495308 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
FDPS-219ENST00000495308 DDX17Q92841 729 aaKnown RBP19.33■□□□□ 0.68
FDPS-219ENST00000495308 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
FDPS-219ENST00000495308 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
FDPS-219ENST00000495308 WASLO00401 505 aaPredicted RBP19.31■□□□□ 0.68
FDPS-219ENST00000495308 ESCO1Q5FWF5 840 aa19.31■□□□□ 0.68
FDPS-219ENST00000495308 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
FDPS-219ENST00000495308 ATP7BP35670 1465 aa19.29■□□□□ 0.68
FDPS-219ENST00000495308 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
FDPS-219ENST00000495308 SHPRHQ149N8 1683 aa19.27■□□□□ 0.68
FDPS-219ENST00000495308 CDK19Q9BWU1 502 aa19.27■□□□□ 0.68
FDPS-219ENST00000495308 PXDNQ92626 1479 aa19.25■□□□□ 0.67
FDPS-219ENST00000495308 PHF8Q9UPP1 1060 aa19.24■□□□□ 0.67
FDPS-219ENST00000495308 FOXO3O43524 673 aa19.23■□□□□ 0.67
FDPS-219ENST00000495308 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
FDPS-219ENST00000495308 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
FDPS-219ENST00000495308 NUDT16Q96DE0 195 aaKnown RBP19.23■□□□□ 0.67
FDPS-219ENST00000495308 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
FDPS-219ENST00000495308 NPHP3Q7Z494 1330 aa19.23■□□□□ 0.67
FDPS-219ENST00000495308 USP47Q96K76 1375 aa19.22■□□□□ 0.67
FDPS-219ENST00000495308 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
FDPS-219ENST00000495308 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
FDPS-219ENST00000495308 JCADQ9P266 1359 aa19.21■□□□□ 0.67
FDPS-219ENST00000495308 SBNO2Q9Y2G9 1366 aa19.21■□□□□ 0.67
FDPS-219ENST00000495308 SOS2Q07890 1332 aaPredicted RBP19.21■□□□□ 0.67
FDPS-219ENST00000495308 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
FDPS-219ENST00000495308 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
FDPS-219ENST00000495308 EVC2Q86UK5 1308 aa19.2■□□□□ 0.66
FDPS-219ENST00000495308 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
FDPS-219ENST00000495308 PPIP5K1Q6PFW1 1433 aa19.17■□□□□ 0.66
FDPS-219ENST00000495308 COL22A1Q8NFW1 1626 aaPredicted RBP19.17■□□□□ 0.66
FDPS-219ENST00000495308 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
FDPS-219ENST00000495308 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
FDPS-219ENST00000495308 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
FDPS-219ENST00000495308 ALS2Q96Q42 1657 aa19.15■□□□□ 0.66
FDPS-219ENST00000495308 TESK2Q96S53 571 aa19.15■□□□□ 0.66
FDPS-219ENST00000495308 LRP6O75581 1613 aa19.14■□□□□ 0.66
FDPS-219ENST00000495308 AKAP12Q02952 1782 aa19.14■□□□□ 0.66
FDPS-219ENST00000495308 PSME1Q06323 249 aa19.14■□□□□ 0.65
FDPS-219ENST00000495308 NGDNQ8NEJ9 315 aaKnown RBP19.14■□□□□ 0.65
FDPS-219ENST00000495308 ABCA3Q99758 1704 aa19.12■□□□□ 0.65
FDPS-219ENST00000495308 TNS3Q68CZ2 1445 aa19.12■□□□□ 0.65
FDPS-219ENST00000495308 ACEP12821 1306 aa19.12■□□□□ 0.65
FDPS-219ENST00000495308 POLR3AO14802 1390 aaPredicted RBP19.11■□□□□ 0.65
FDPS-219ENST00000495308 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
FDPS-219ENST00000495308 SPATA31A6Q5VVP1 1343 aa19.11■□□□□ 0.65
FDPS-219ENST00000495308 SPATA31A3Q5VYP0 1347 aa19.11■□□□□ 0.65
FDPS-219ENST00000495308 PLEKHG3A1L390 1219 aa19.11■□□□□ 0.65
FDPS-219ENST00000495308 SBNO1A3KN83 1393 aa19.1■□□□□ 0.65
FDPS-219ENST00000495308 ATAD2Q6PL18 1390 aa19.1■□□□□ 0.65
FDPS-219ENST00000495308 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
FDPS-219ENST00000495308 MARF1Q9Y4F3 1742 aaKnown RBP19.1■□□□□ 0.65
FDPS-219ENST00000495308 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
FDPS-219ENST00000495308 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
FDPS-219ENST00000495308 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
FDPS-219ENST00000495308 MON2Q7Z3U7 1717 aa19.08■□□□□ 0.65
FDPS-219ENST00000495308 CRYBG1Q9Y4K1 1723 aa19.08■□□□□ 0.64
FDPS-219ENST00000495308 NRKQ7Z2Y5 1582 aa19.07■□□□□ 0.64
FDPS-219ENST00000495308 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
FDPS-219ENST00000495308 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
FDPS-219ENST00000495308 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
FDPS-219ENST00000495308 HSPA5P11021 654 aaKnown RBP19.06■□□□□ 0.64
FDPS-219ENST00000495308 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
FDPS-219ENST00000495308 MYOM1P52179 1685 aa19.05■□□□□ 0.64
FDPS-219ENST00000495308 TMF1P82094 1093 aa19.05■□□□□ 0.64
FDPS-219ENST00000495308 PHRF1Q9P1Y6 1649 aaKnown RBP19.04■□□□□ 0.64
FDPS-219ENST00000495308 USP6P35125 1406 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms