RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 RSPH4AQ5TD94 716 aa7.42□□□□□ -1.22
CMSS1-207ENST00000494412 FBXO31Q5XUX0 539 aaPredicted RBP7.42□□□□□ -1.22
CMSS1-207ENST00000494412 RIC3Q7Z5B4 369 aa7.42□□□□□ -1.22
CMSS1-207ENST00000494412 NECTIN2Q92692 538 aa7.42□□□□□ -1.22
CMSS1-207ENST00000494412 ACTN4O43707 911 aaKnown RBP7.41□□□□□ -1.22
CMSS1-207ENST00000494412 PUS10Q3MIT2 529 aaKnown RBP7.41□□□□□ -1.22
CMSS1-207ENST00000494412 KMT5BQ4FZB7 885 aa7.41□□□□□ -1.22
CMSS1-207ENST00000494412 NYAP1Q6ZVC0 841 aa7.41□□□□□ -1.22
CMSS1-207ENST00000494412 SPIRE2Q8WWL2 714 aa7.41□□□□□ -1.22
CMSS1-207ENST00000494412 COPS2P61201 443 aa7.4□□□□□ -1.22
CMSS1-207ENST00000494412 FUT2Q10981 343 aa7.4□□□□□ -1.22
CMSS1-207ENST00000494412 CSPP1Q1MSJ5 1256 aa7.4□□□□□ -1.22
CMSS1-207ENST00000494412 PPP2R2DQ66LE6 453 aa7.4□□□□□ -1.22
CMSS1-207ENST00000494412 CCDC9Q9Y3X0 531 aaKnown RBP7.4□□□□□ -1.22
CMSS1-207ENST00000494412 TJAP1Q5JTD0 557 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 NUTM1Q86Y26 1132 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 WWC1Q8IX03 1113 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 HLA-CQ95604 372 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 MTRQ99707 1265 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 GDPD2Q9HCC8 539 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 PCDHB3Q9Y5E6 796 aa7.39□□□□□ -1.23
CMSS1-207ENST00000494412 MTMR14Q8NCE2 650 aa7.38□□□□□ -1.23
CMSS1-207ENST00000494412 TRAIPQ9BWF2 469 aa7.38□□□□□ -1.23
CMSS1-207ENST00000494412 SPTLC1O15269 473 aa7.37□□□□□ -1.23
CMSS1-207ENST00000494412 KDM4AO75164 1064 aa7.37□□□□□ -1.23
CMSS1-207ENST00000494412 ABL2P42684 1182 aa7.37□□□□□ -1.23
CMSS1-207ENST00000494412 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
CMSS1-207ENST00000494412 MOXD2PA6NHM9 499 aa7.36□□□□□ -1.23
CMSS1-207ENST00000494412 GUCA2AQ02747 115 aa7.36□□□□□ -1.23
CMSS1-207ENST00000494412 RSBN1LQ6PCB5 846 aaPredicted RBP7.36□□□□□ -1.23
CMSS1-207ENST00000494412 PRM3Q9NNZ6 103 aa7.36□□□□□ -1.23
CMSS1-207ENST00000494412 PLA2G2EQ9NZK7 142 aa7.36□□□□□ -1.23
CMSS1-207ENST00000494412 AP1G2O75843 785 aa7.35□□□□□ -1.23
CMSS1-207ENST00000494412 ITGBL1O95965 494 aaPredicted RBP7.35□□□□□ -1.23
CMSS1-207ENST00000494412 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
CMSS1-207ENST00000494412 TUSC1Q2TAM9 212 aa7.35□□□□□ -1.23
CMSS1-207ENST00000494412 AEBP1Q8IUX7 1158 aa7.35□□□□□ -1.23
CMSS1-207ENST00000494412 RETREG2Q8NC44 543 aa7.35□□□□□ -1.23
CMSS1-207ENST00000494412 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
CMSS1-207ENST00000494412 HOXA2O43364 376 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 NDUFV2P19404 249 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 KCNC4Q03721 635 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 QPCTQ16769 361 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 MORN1Q5T089 497 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 SCUBE3Q8IX30 993 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 KCTD17Q8N5Z5 321 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 NKX2-3Q8TAU0 364 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 IL21Q9HBE4 155 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 TBC1D2BQ9UPU7 963 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 SLC27A5Q9Y2P5 690 aa7.34□□□□□ -1.23
CMSS1-207ENST00000494412 NUTM2BA6NNL0 878 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-207ENST00000494412 NUTM2EB1AL46 878 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-207ENST00000494412 TLL1O43897 1013 aa7.33□□□□□ -1.24
CMSS1-207ENST00000494412 NUTM2DQ5VT03 806 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-207ENST00000494412 NUTM2AQ8IVF1 878 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-207ENST00000494412 POM121CA8CG34 1229 aa7.32□□□□□ -1.24
CMSS1-207ENST00000494412 LILRB3O75022 631 aa7.32□□□□□ -1.24
CMSS1-207ENST00000494412 ZPR1O75312 459 aa7.32□□□□□ -1.24
CMSS1-207ENST00000494412 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
CMSS1-207ENST00000494412 RTL5Q5HYW3 569 aaPredicted RBP7.32□□□□□ -1.24
CMSS1-207ENST00000494412 GLMNQ92990 594 aa7.32□□□□□ -1.24
CMSS1-207ENST00000494412 PCDHB15Q9Y5E8 787 aa7.32□□□□□ -1.24
CMSS1-207ENST00000494412 NR1I2O75469 434 aa7.31□□□□□ -1.24
CMSS1-207ENST00000494412 CABLES1Q8TDN4 633 aa7.31□□□□□ -1.24
CMSS1-207ENST00000494412 SOCS7O14512 581 aa7.3□□□□□ -1.24
CMSS1-207ENST00000494412 GJA5P36382 358 aa7.3□□□□□ -1.24
CMSS1-207ENST00000494412 USP46P62068 366 aa7.3□□□□□ -1.24
CMSS1-207ENST00000494412 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
CMSS1-207ENST00000494412 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
CMSS1-207ENST00000494412 SYMPKQ92797 1274 aaKnown RBP7.3□□□□□ -1.24
CMSS1-207ENST00000494412 PCDHGC3Q9UN70 934 aa7.3□□□□□ -1.24
CMSS1-207ENST00000494412 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
CMSS1-207ENST00000494412 FDX1P10109 184 aa7.29□□□□□ -1.24
CMSS1-207ENST00000494412 ACIN1Q9UKV3 1341 aaKnown RBP7.28□□□□□ -1.24
CMSS1-207ENST00000494412 BRICD5Q6PL45 260 aa7.28□□□□□ -1.24
CMSS1-207ENST00000494412 THAP11Q96EK4 314 aa7.28□□□□□ -1.24
CMSS1-207ENST00000494412 IRF5Q13568 498 aa7.27□□□□□ -1.25
CMSS1-207ENST00000494412 PRPF38BQ5VTL8 546 aaKnown RBP7.27□□□□□ -1.25
CMSS1-207ENST00000494412 SPSB2Q99619 263 aa7.27□□□□□ -1.25
CMSS1-207ENST00000494412 ZBTB3Q9H5J0 574 aa7.27□□□□□ -1.25
CMSS1-207ENST00000494412 NDUFB9Q9Y6M9 179 aa7.27□□□□□ -1.25
CMSS1-207ENST00000494412 IFFO2Q5TF58 517 aa7.26□□□□□ -1.25
CMSS1-207ENST00000494412 FMNL1O95466 1100 aaPredicted RBP7.25□□□□□ -1.25
CMSS1-207ENST00000494412 S1PR4O95977 384 aa7.25□□□□□ -1.25
CMSS1-207ENST00000494412 ADH1BP00325 375 aa7.25□□□□□ -1.25
CMSS1-207ENST00000494412 HDGFL1Q5TGJ6 251 aa7.25□□□□□ -1.25
CMSS1-207ENST00000494412 FAM160A2Q8N612 972 aaPredicted RBP7.25□□□□□ -1.25
CMSS1-207ENST00000494412 PRDM9Q9NQV7 894 aa7.25□□□□□ -1.25
CMSS1-207ENST00000494412 C6orf229H3BNL8 230 aa7.24□□□□□ -1.25
CMSS1-207ENST00000494412 Q3C1V9 767 aa7.24□□□□□ -1.25
CMSS1-207ENST00000494412 PPP1R18Q6NYC8 613 aa7.24□□□□□ -1.25
CMSS1-207ENST00000494412 TSC1Q92574 1164 aa7.24□□□□□ -1.25
CMSS1-207ENST00000494412 GJD4Q96KN9 370 aaPredicted RBP7.24□□□□□ -1.25
CMSS1-207ENST00000494412 SALL2Q9Y467 1007 aaPredicted RBP7.24□□□□□ -1.25
CMSS1-207ENST00000494412 A0A0G2JS52 829 aa7.23□□□□□ -1.25
CMSS1-207ENST00000494412 PPEF1O14829 653 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-207ENST00000494412 RFX1P22670 979 aa7.23□□□□□ -1.25
CMSS1-207ENST00000494412 PDE4CQ08493 712 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms