RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
PHF3-205ENST00000494284 VGFO15240 615 aaPredicted RBP16.33■□□□□ 0.2
PHF3-205ENST00000494284 BCAR3O75815 825 aa16.33■□□□□ 0.2
PHF3-205ENST00000494284 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
PHF3-205ENST00000494284 MTHFSP49914 203 aa16.32■□□□□ 0.2
PHF3-205ENST00000494284 GGNBP2Q9H3C7 697 aa16.32■□□□□ 0.2
PHF3-205ENST00000494284 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
PHF3-205ENST00000494284 ZC3H13Q5T200 1668 aaKnown RBP16.32■□□□□ 0.2
PHF3-205ENST00000494284 PIK3C2BO00750 1634 aa16.32■□□□□ 0.2
PHF3-205ENST00000494284 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
PHF3-205ENST00000494284 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
PHF3-205ENST00000494284 ZNF521Q96K83 1311 aa16.3■□□□□ 0.2
PHF3-205ENST00000494284 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
PHF3-205ENST00000494284 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
PHF3-205ENST00000494284 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
PHF3-205ENST00000494284 POGKQ9P215 609 aa16.28■□□□□ 0.2
PHF3-205ENST00000494284 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
PHF3-205ENST00000494284 SLFN5Q08AF3 891 aa16.27■□□□□ 0.2
PHF3-205ENST00000494284 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.19
PHF3-205ENST00000494284 PDE4AP27815 886 aa16.26■□□□□ 0.19
PHF3-205ENST00000494284 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
PHF3-205ENST00000494284 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
PHF3-205ENST00000494284 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
PHF3-205ENST00000494284 RPGRIP1LQ68CZ1 1315 aa16.26■□□□□ 0.19
PHF3-205ENST00000494284 EVC2Q86UK5 1308 aa16.26■□□□□ 0.19
PHF3-205ENST00000494284 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
PHF3-205ENST00000494284 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
PHF3-205ENST00000494284 IPO9Q96P70 1041 aaKnown RBP16.25■□□□□ 0.19
PHF3-205ENST00000494284 TNNQ9UQP3 1299 aa16.25■□□□□ 0.19
PHF3-205ENST00000494284 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
PHF3-205ENST00000494284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■■□□□ 11.8
PHF3-205ENST00000494284 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
PHF3-205ENST00000494284 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
PHF3-205ENST00000494284 SBNO2Q9Y2G9 1366 aa16.24■□□□□ 0.19
PHF3-205ENST00000494284 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
PHF3-205ENST00000494284 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
PHF3-205ENST00000494284 RGS3P49796 1198 aa16.23■□□□□ 0.19
PHF3-205ENST00000494284 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
PHF3-205ENST00000494284 TCP11L2Q8N4U5 519 aa16.23■□□□□ 0.19
PHF3-205ENST00000494284 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
PHF3-205ENST00000494284 CABP1Q9NZU7 370 aa16.22■□□□□ 0.19
PHF3-205ENST00000494284 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
PHF3-205ENST00000494284 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
PHF3-205ENST00000494284 BCL11AQ9H165 835 aa16.22■□□□□ 0.19
PHF3-205ENST00000494284 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
PHF3-205ENST00000494284 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
PHF3-205ENST00000494284 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
PHF3-205ENST00000494284 SLC4A3P48751 1232 aa16.21■□□□□ 0.19
PHF3-205ENST00000494284 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
PHF3-205ENST00000494284 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
PHF3-205ENST00000494284 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
PHF3-205ENST00000494284 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
PHF3-205ENST00000494284 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
PHF3-205ENST00000494284 AGLP35573 1532 aa16.19■□□□□ 0.18
PHF3-205ENST00000494284 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
PHF3-205ENST00000494284 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
PHF3-205ENST00000494284 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
PHF3-205ENST00000494284 SHPRHQ149N8 1683 aa16.19■□□□□ 0.18
PHF3-205ENST00000494284 YTHDC2Q9H6S0 1430 aaKnown RBP16.19■□□□□ 0.18
PHF3-205ENST00000494284 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
PHF3-205ENST00000494284 PTPRMP28827 1452 aa16.18■□□□□ 0.18
PHF3-205ENST00000494284 FYB1O15117 783 aa16.18■□□□□ 0.18
PHF3-205ENST00000494284 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
PHF3-205ENST00000494284 DEKP35659 375 aaKnown RBP16.17■□□□□ 0.18
PHF3-205ENST00000494284 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
PHF3-205ENST00000494284 TRMT2AQ8IZ69 625 aaKnown RBP16.17■□□□□ 0.18
PHF3-205ENST00000494284 BACH2Q9BYV9 841 aa16.17■□□□□ 0.18
PHF3-205ENST00000494284 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
PHF3-205ENST00000494284 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
PHF3-205ENST00000494284 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
PHF3-205ENST00000494284 COG6Q9Y2V7 657 aa16.15■□□□□ 0.18
PHF3-205ENST00000494284 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
PHF3-205ENST00000494284 ALKQ9UM73 1620 aa16.15■□□□□ 0.18
PHF3-205ENST00000494284 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
PHF3-205ENST00000494284 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
PHF3-205ENST00000494284 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
PHF3-205ENST00000494284 INSRP06213 1382 aa16.14■□□□□ 0.17
PHF3-205ENST00000494284 METP08581 1390 aa16.13■□□□□ 0.17
PHF3-205ENST00000494284 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
PHF3-205ENST00000494284 CD163L1Q9NR16 1453 aa16.13■□□□□ 0.17
PHF3-205ENST00000494284 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
PHF3-205ENST00000494284 E9PSI1 815 aa16.12■□□□□ 0.17
PHF3-205ENST00000494284 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
PHF3-205ENST00000494284 RLBP1P12271 317 aa16.12■□□□□ 0.17
PHF3-205ENST00000494284 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
PHF3-205ENST00000494284 RIMS2Q9UQ26 1411 aa16.11■□□□□ 0.17
PHF3-205ENST00000494284 IGHDP01880 384 aa16.11■□□□□ 0.17
PHF3-205ENST00000494284 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
PHF3-205ENST00000494284 ZMYM3Q14202 1370 aa16.1■□□□□ 0.17
PHF3-205ENST00000494284 HMOX1P09601 288 aa16.09■□□□□ 0.17
PHF3-205ENST00000494284 NME9Q86XW9 330 aa16.09■□□□□ 0.17
PHF3-205ENST00000494284 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
PHF3-205ENST00000494284 ABCC11Q96J66 1382 aa16.09■□□□□ 0.17
PHF3-205ENST00000494284 SOX12O15370 315 aa16.09■□□□□ 0.17
PHF3-205ENST00000494284 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.17
PHF3-205ENST00000494284 THUMPD2Q9BTF0 503 aaKnown RBP16.08■□□□□ 0.16
PHF3-205ENST00000494284 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
PHF3-205ENST00000494284 SPATA31D1Q6ZQQ2 1576 aa16.08■□□□□ 0.16
PHF3-205ENST00000494284 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
PHF3-205ENST00000494284 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms