RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 PRAM1Q96QH2 718 aa10.42□□□□□ -0.74
PDLIM1-204ENST00000492511 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
PDLIM1-204ENST00000492511 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
PDLIM1-204ENST00000492511 C1orf167Q5SNV9 1468 aa10.42□□□□□ -0.74
PDLIM1-204ENST00000492511 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
PDLIM1-204ENST00000492511 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
PDLIM1-204ENST00000492511 LAMC1P11047 1609 aa10.4□□□□□ -0.74
PDLIM1-204ENST00000492511 SAFB2Q14151 953 aaKnown RBP eCLIP10.4□□□□□ -0.74
PDLIM1-204ENST00000492511 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.74
PDLIM1-204ENST00000492511 DLC1Q96QB1 1528 aa10.39□□□□□ -0.75
PDLIM1-204ENST00000492511 AHDC1Q5TGY3 1603 aaPredicted RBP10.38□□□□□ -0.75
PDLIM1-204ENST00000492511 NUTM2FA1L443 756 aa10.38□□□□□ -0.75
PDLIM1-204ENST00000492511 NBPF8Q3BBV2 869 aa10.38□□□□□ -0.75
PDLIM1-204ENST00000492511 POGKQ9P215 609 aa10.38□□□□□ -0.75
PDLIM1-204ENST00000492511 COL16A1Q07092 1604 aaPredicted RBP10.37□□□□□ -0.75
PDLIM1-204ENST00000492511 CDC42BPGQ6DT37 1551 aa10.37□□□□□ -0.75
PDLIM1-204ENST00000492511 ESCO1Q5FWF5 840 aa10.36□□□□□ -0.75
PDLIM1-204ENST00000492511 HIRIP3Q9BW71 556 aaPredicted RBP10.36□□□□□ -0.75
PDLIM1-204ENST00000492511 JCADQ9P266 1359 aa10.36□□□□□ -0.75
PDLIM1-204ENST00000492511 PHLPP1O60346 1717 aa10.36□□□□□ -0.75
PDLIM1-204ENST00000492511 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
PDLIM1-204ENST00000492511 MINK1Q8N4C8 1332 aaPredicted RBP10.35□□□□□ -0.75
PDLIM1-204ENST00000492511 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
PDLIM1-204ENST00000492511 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
PDLIM1-204ENST00000492511 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
PDLIM1-204ENST00000492511 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
PDLIM1-204ENST00000492511 WASLO00401 505 aaPredicted RBP10.33□□□□□ -0.76
PDLIM1-204ENST00000492511 FOXO3O43524 673 aa10.33□□□□□ -0.76
PDLIM1-204ENST00000492511 LRRC59Q96AG4 307 aaKnown RBP10.33□□□□□ -0.76
PDLIM1-204ENST00000492511 XPCQ01831 940 aaPredicted RBP10.32□□□□□ -0.76
PDLIM1-204ENST00000492511 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
PDLIM1-204ENST00000492511 ADGRB2O60241 1585 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 PNPLA6Q8IY17 1366 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 TONSLQ96HA7 1378 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 CDK19Q9BWU1 502 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 PHF8Q9UPP1 1060 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 LRP6O75581 1613 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 SPATA31A6Q5VVP1 1343 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 NPHP3Q7Z494 1330 aa10.31□□□□□ -0.76
PDLIM1-204ENST00000492511 PXDNQ92626 1479 aa10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 ARHGEF28Q8N1W1 1705 aaKnown RBP10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 ROCK2O75116 1388 aaKnown RBP10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 GPRASP1Q5JY77 1395 aa10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 TRPM1Q7Z4N2 1603 aa10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 USP32Q8NFA0 1604 aa10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 PMFBP1Q8TBY8 1022 aa10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 ANKARQ7Z5J8 1434 aa10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1-204ENST00000492511 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
PDLIM1-204ENST00000492511 KRT28Q7Z3Y7 464 aa10.29□□□□□ -0.76
PDLIM1-204ENST00000492511 NUDT16Q96DE0 195 aaKnown RBP10.29□□□□□ -0.76
PDLIM1-204ENST00000492511 NUTM2BA6NNL0 878 aaPredicted RBP10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 NUTM2EB1AL46 878 aaPredicted RBP10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 MEX3CQ5U5Q3 659 aaKnown RBP10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 NUTM2AQ8IVF1 878 aaPredicted RBP10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 CLSPNQ9HAW4 1339 aa10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 TULP4Q9NRJ4 1543 aa10.28□□□□□ -0.76
PDLIM1-204ENST00000492511 SPATA31A3Q5VYP0 1347 aa10.27□□□□□ -0.77
PDLIM1-204ENST00000492511 ATP7BP35670 1465 aa10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 ZNF772Q68DY9 489 aaPredicted RBP10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 RGPD8O14715 1765 aaPredicted RBP10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 EIF3AQ14152 1382 aaKnown RBP10.26□□□□□ -0.77
PDLIM1-204ENST00000492511 PLEKHG3A1L390 1219 aa10.25□□□□□ -0.77
PDLIM1-204ENST00000492511 PSME1Q06323 249 aa10.25□□□□□ -0.77
PDLIM1-204ENST00000492511 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
PDLIM1-204ENST00000492511 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
PDLIM1-204ENST00000492511 CCER1Q8TC90 406 aaPredicted RBP10.24□□□□□ -0.77
PDLIM1-204ENST00000492511 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
PDLIM1-204ENST00000492511 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
PDLIM1-204ENST00000492511 ADAMTS2O95450 1211 aa10.23□□□□□ -0.77
PDLIM1-204ENST00000492511 SRPK2P78362 688 aaKnown RBP10.23□□□□□ -0.77
PDLIM1-204ENST00000492511 NGDNQ8NEJ9 315 aaKnown RBP10.23□□□□□ -0.77
PDLIM1-204ENST00000492511 ACEP12821 1306 aa10.23□□□□□ -0.77
PDLIM1-204ENST00000492511 POLR3AO14802 1390 aaPredicted RBP10.23□□□□□ -0.77
PDLIM1-204ENST00000492511 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
PDLIM1-204ENST00000492511 CABLES1Q8TDN4 633 aa10.22□□□□□ -0.77
PDLIM1-204ENST00000492511 CABP1Q9NZU7 370 aa10.22□□□□□ -0.77
PDLIM1-204ENST00000492511 EVC2Q86UK5 1308 aa10.22□□□□□ -0.77
PDLIM1-204ENST00000492511 TNS3Q68CZ2 1445 aa10.22□□□□□ -0.77
PDLIM1-204ENST00000492511 C8orf37Q96NL8 207 aa10.21□□□□□ -0.77
PDLIM1-204ENST00000492511 TESK2Q96S53 571 aa10.21□□□□□ -0.77
PDLIM1-204ENST00000492511 AFF2P51816 1311 aa10.21□□□□□ -0.78
PDLIM1-204ENST00000492511 QRICH2Q9H0J4 1663 aa10.21□□□□□ -0.78
PDLIM1-204ENST00000492511 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
PDLIM1-204ENST00000492511 PPIP5K1Q6PFW1 1433 aa10.2□□□□□ -0.78
PDLIM1-204ENST00000492511 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
PDLIM1-204ENST00000492511 SBNO2Q9Y2G9 1366 aa10.2□□□□□ -0.78
PDLIM1-204ENST00000492511 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
PDLIM1-204ENST00000492511 RXRBP28702 533 aa10.19□□□□□ -0.78
PDLIM1-204ENST00000492511 LMOD2Q6P5Q4 547 aa10.19□□□□□ -0.78
PDLIM1-204ENST00000492511 NGLY1Q96IV0 654 aa10.19□□□□□ -0.78
PDLIM1-204ENST00000492511 TOPAZ1Q8N9V7 1692 aa10.18□□□□□ -0.78
PDLIM1-204ENST00000492511 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
PDLIM1-204ENST00000492511 ARHGEF10O15013 1369 aa10.18□□□□□ -0.78
PDLIM1-204ENST00000492511 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
PDLIM1-204ENST00000492511 PLEKHG5O94827 1062 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms