RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 PRAM1Q96QH2 718 aa37.09■■■■□ 3.53
TTC3-223ENST00000492275 CLSPNQ9HAW4 1339 aa37.09■■■■□ 3.53
TTC3-223ENST00000492275 NBPF8Q3BBV2 869 aa37.08■■■■□ 3.53
TTC3-223ENST00000492275 MST1RQ04912 1400 aa37.08■■■■□ 3.53
TTC3-223ENST00000492275 TRPM1Q7Z4N2 1603 aa37.07■■■■□ 3.52
TTC3-223ENST00000492275 ARHGEF28Q8N1W1 1705 aaKnown RBP37.03■■■■□ 3.52
TTC3-223ENST00000492275 POGKQ9P215 609 aa37.03■■■■□ 3.52
TTC3-223ENST00000492275 SAFB2Q14151 953 aaKnown RBP eCLIP37.02■■■■□ 3.52
TTC3-223ENST00000492275 CCER1Q8TC90 406 aaPredicted RBP37.02■■■■□ 3.52
TTC3-223ENST00000492275 CDC42BPGQ6DT37 1551 aa37.01■■■■□ 3.52
TTC3-223ENST00000492275 BRINP3Q76B58 766 aa36.97■■■■□ 3.51
TTC3-223ENST00000492275 C1orf167Q5SNV9 1468 aa36.96■■■■□ 3.51
TTC3-223ENST00000492275 FMN2Q9NZ56 1722 aa36.92■■■■□ 3.5
TTC3-223ENST00000492275 ROCK2O75116 1388 aaKnown RBP36.91■■■■□ 3.5
TTC3-223ENST00000492275 MINK1Q8N4C8 1332 aaPredicted RBP36.89■■■■□ 3.5
TTC3-223ENST00000492275 PHLPP1O60346 1717 aa36.89■■■■□ 3.5
TTC3-223ENST00000492275 ADGRB2O60241 1585 aa36.88■■■■□ 3.49
TTC3-223ENST00000492275 ORAI2Q96SN7 254 aa36.88■■■■□ 3.49
TTC3-223ENST00000492275 NUTM2FA1L443 756 aa36.87■■■■□ 3.49
TTC3-223ENST00000492275 HIRIP3Q9BW71 556 aaPredicted RBP36.87■■■■□ 3.49
TTC3-223ENST00000492275 TIMELESSQ9UNS1 1208 aa36.87■■■■□ 3.49
TTC3-223ENST00000492275 GPRASP1Q5JY77 1395 aa36.86■■■■□ 3.49
TTC3-223ENST00000492275 RGPD8O14715 1765 aaPredicted RBP36.85■■■■□ 3.49
TTC3-223ENST00000492275 AHDC1Q5TGY3 1603 aaPredicted RBP36.85■■■■□ 3.49
TTC3-223ENST00000492275 RALGAPBQ86X10 1494 aa36.84■■■■□ 3.49
TTC3-223ENST00000492275 NHSL1Q5SYE7 1610 aa36.81■■■■□ 3.48
TTC3-223ENST00000492275 ESCO1Q5FWF5 840 aa36.8■■■■□ 3.48
TTC3-223ENST00000492275 COL16A1Q07092 1604 aaPredicted RBP36.8■■■■□ 3.48
TTC3-223ENST00000492275 DDX17Q92841 729 aaKnown RBP36.79■■■■□ 3.48
TTC3-223ENST00000492275 WASLO00401 505 aaPredicted RBP36.78■■■■□ 3.48
TTC3-223ENST00000492275 CENPJQ9HC77 1338 aaPredicted RBP36.78■■■■□ 3.48
TTC3-223ENST00000492275 CARD11Q9BXL7 1154 aa36.76■■■■□ 3.48
TTC3-223ENST00000492275 USP32Q8NFA0 1604 aa36.76■■■■□ 3.48
TTC3-223ENST00000492275 QRICH2Q9H0J4 1663 aa36.75■■■■□ 3.47
TTC3-223ENST00000492275 ANKARQ7Z5J8 1434 aa36.71■■■■□ 3.47
TTC3-223ENST00000492275 PRR36Q9H6K5 1346 aa36.7■■■■□ 3.47
TTC3-223ENST00000492275 CDK19Q9BWU1 502 aa36.69■■■■□ 3.46
TTC3-223ENST00000492275 TULP4Q9NRJ4 1543 aa36.69■■■■□ 3.46
TTC3-223ENST00000492275 EIF3AQ14152 1382 aaKnown RBP36.66■■■■□ 3.46
TTC3-223ENST00000492275 FOXO3O43524 673 aa36.66■■■■□ 3.46
TTC3-223ENST00000492275 KIF1AQ12756 1690 aa36.66■■■■□ 3.46
TTC3-223ENST00000492275 SOS2Q07890 1332 aaPredicted RBP36.65■■■■□ 3.46
TTC3-223ENST00000492275 PHF8Q9UPP1 1060 aa36.65■■■■□ 3.46
TTC3-223ENST00000492275 JCADQ9P266 1359 aa36.64■■■■□ 3.46
TTC3-223ENST00000492275 NPHP3Q7Z494 1330 aa36.61■■■■□ 3.45
TTC3-223ENST00000492275 NUDT16Q96DE0 195 aaKnown RBP36.61■■■■□ 3.45
TTC3-223ENST00000492275 LRRC59Q96AG4 307 aaKnown RBP36.6■■■■□ 3.45
TTC3-223ENST00000492275 ATP7BP35670 1465 aa36.59■■■■□ 3.45
TTC3-223ENST00000492275 PXDNQ92626 1479 aa36.59■■■■□ 3.45
TTC3-223ENST00000492275 SHPRHQ149N8 1683 aa36.58■■■■□ 3.45
TTC3-223ENST00000492275 XPCQ01831 940 aaPredicted RBP36.58■■■■□ 3.45
TTC3-223ENST00000492275 PMFBP1Q8TBY8 1022 aa36.58■■■■□ 3.45
TTC3-223ENST00000492275 MED1Q15648 1581 aaPredicted RBP36.55■■■■□ 3.44
TTC3-223ENST00000492275 ITSN1Q15811 1721 aa36.55■■■■□ 3.44
TTC3-223ENST00000492275 CABP2Q9NPB3 220 aa36.54■■■■□ 3.44
TTC3-223ENST00000492275 SRPK2P78362 688 aaKnown RBP36.53■■■■□ 3.44
TTC3-223ENST00000492275 KRT28Q7Z3Y7 464 aa36.52■■■■□ 3.44
TTC3-223ENST00000492275 EVC2Q86UK5 1308 aa36.52■■■■□ 3.44
TTC3-223ENST00000492275 SBNO2Q9Y2G9 1366 aa36.52■■■■□ 3.44
TTC3-223ENST00000492275 TOPAZ1Q8N9V7 1692 aa36.51■■■■□ 3.44
TTC3-223ENST00000492275 CCDC61Q9Y6R9 512 aa36.51■■■■□ 3.44
TTC3-223ENST00000492275 PNPLA6Q8IY17 1366 aa36.5■■■■□ 3.43
TTC3-223ENST00000492275 ST20-MTHFSA0A0A6YYL1 179 aa36.48■■■■□ 3.43
TTC3-223ENST00000492275 PSME1Q06323 249 aa36.47■■■■□ 3.43
TTC3-223ENST00000492275 SPATA31A6Q5VVP1 1343 aa36.47■■■■□ 3.43
TTC3-223ENST00000492275 USP47Q96K76 1375 aa36.45■■■■□ 3.43
TTC3-223ENST00000492275 PLEKHG3A1L390 1219 aa36.44■■■■□ 3.42
TTC3-223ENST00000492275 TESK2Q96S53 571 aa36.44■■■■□ 3.42
TTC3-223ENST00000492275 NGDNQ8NEJ9 315 aaKnown RBP36.43■■■■□ 3.42
TTC3-223ENST00000492275 SPATA31A3Q5VYP0 1347 aa36.42■■■■□ 3.42
TTC3-223ENST00000492275 LRP6O75581 1613 aa36.41■■■■□ 3.42
TTC3-223ENST00000492275 DISP3Q9P2K9 1392 aa36.41■■■■□ 3.42
TTC3-223ENST00000492275 PPIP5K1Q6PFW1 1433 aa36.4■■■■□ 3.42
TTC3-223ENST00000492275 TRPM3Q9HCF6 1732 aaPredicted RBP36.39■■■■□ 3.42
TTC3-223ENST00000492275 SBNO1A3KN83 1393 aa36.39■■■■□ 3.42
TTC3-223ENST00000492275 POLR3AO14802 1390 aaPredicted RBP36.39■■■■□ 3.42
TTC3-223ENST00000492275 ACEP12821 1306 aa36.38■■■■□ 3.41
TTC3-223ENST00000492275 COL22A1Q8NFW1 1626 aaPredicted RBP36.38■■■■□ 3.41
TTC3-223ENST00000492275 NUTM2BA6NNL0 878 aaPredicted RBP36.38■■■■□ 3.41
TTC3-223ENST00000492275 NUTM2EB1AL46 878 aaPredicted RBP36.38■■■■□ 3.41
TTC3-223ENST00000492275 NUTM2AQ8IVF1 878 aaPredicted RBP36.38■■■■□ 3.41
TTC3-223ENST00000492275 CABP1Q9NZU7 370 aa36.36■■■■□ 3.41
TTC3-223ENST00000492275 TNS3Q68CZ2 1445 aa36.34■■■■□ 3.41
TTC3-223ENST00000492275 ATAD2Q6PL18 1390 aa36.3■■■■□ 3.4
TTC3-223ENST00000492275 ALS2Q96Q42 1657 aa36.29■■■■□ 3.4
TTC3-223ENST00000492275 SLC24A1O60721 1099 aa36.28■■■■□ 3.4
TTC3-223ENST00000492275 LMOD2Q6P5Q4 547 aa36.27■■■■□ 3.4
TTC3-223ENST00000492275 PUS7Q96PZ0 661 aaKnown RBP36.27■■■■□ 3.4
TTC3-223ENST00000492275 PHF23Q9BUL5 403 aaPredicted RBP36.27■■■■□ 3.4
TTC3-223ENST00000492275 PAK3O75914 559 aaPredicted RBP36.25■■■■□ 3.39
TTC3-223ENST00000492275 MEX3CQ5U5Q3 659 aaKnown RBP36.25■■■■□ 3.39
TTC3-223ENST00000492275 RGS17Q9UGC6 210 aaPredicted RBP36.25■■■■□ 3.39
TTC3-223ENST00000492275 ARHGEF10O15013 1369 aa36.25■■■■□ 3.39
TTC3-223ENST00000492275 AKAP12Q02952 1782 aa36.22■■■■□ 3.39
TTC3-223ENST00000492275 ADAMTS2O95450 1211 aa36.21■■■■□ 3.39
TTC3-223ENST00000492275 TMF1P82094 1093 aa36.21■■■■□ 3.39
TTC3-223ENST00000492275 EIF4G2P78344 907 aaKnown RBP eCLIP36.2■■■■□ 3.393e-6■■■□□ 15.8
TTC3-223ENST00000492275 CABLES1Q8TDN4 633 aa36.19■■■■□ 3.38
TTC3-223ENST00000492275 USP6P35125 1406 aa36.18■■■■□ 3.38
TTC3-223ENST00000492275 HSPA5P11021 654 aaKnown RBP36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms