RNA–Protein interactions for RNA: ENST00000491523.5

RPL13-209, Transcript of ribosomal protein L13, human

TSL 3

Gene RPL13, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL13-209	ENST00000491523	MST1R	Q04912	1400 aa		32.5	■■■□□ 2.79
RPL13-209	ENST00000491523	DLC1	Q96QB1	1528 aa		32.49	■■■□□ 2.79
RPL13-209	ENST00000491523	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.48	■■■□□ 2.79
RPL13-209	ENST00000491523	TRAK1	Q9UPV9	953 aa		32.48	■■■□□ 2.79
RPL13-209	ENST00000491523	PHLPP1	O60346	1717 aa		32.47	■■■□□ 2.79
RPL13-209	ENST00000491523	NBPF1	Q3BBV0	1214 aa		32.47	■■■□□ 2.79
RPL13-209	ENST00000491523	SIRT1	Q96EB6	747 aa		32.47	■■■□□ 2.79
RPL13-209	ENST00000491523	BRINP3	Q76B58	766 aa		32.44	■■■□□ 2.78
RPL13-209	ENST00000491523	PRAM1	Q96QH2	718 aa		32.44	■■■□□ 2.78
RPL13-209	ENST00000491523	NBPF8	Q3BBV2	869 aa		32.43	■■■□□ 2.78
RPL13-209	ENST00000491523	TRPM1	Q7Z4N2	1603 aa		32.43	■■■□□ 2.78
RPL13-209	ENST00000491523	JCAD	Q9P266	1359 aa		32.42	■■■□□ 2.78
RPL13-209	ENST00000491523	COL16A1	Q07092	1604 aa	Predicted RBP	32.41	■■■□□ 2.78
RPL13-209	ENST00000491523	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
RPL13-209	ENST00000491523	POGK	Q9P215	609 aa		32.4	■■■□□ 2.78
RPL13-209	ENST00000491523	CDC42BPG	Q6DT37	1551 aa		32.4	■■■□□ 2.78
RPL13-209	ENST00000491523	C1orf167	Q5SNV9	1468 aa		32.37	■■■□□ 2.77
RPL13-209	ENST00000491523	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.37	■■■□□ 2.77
RPL13-209	ENST00000491523	ROCK2	O75116	1388 aa	Known RBP	32.35	■■■□□ 2.77
RPL13-209	ENST00000491523	NHSL1	Q5SYE7	1610 aa		32.33	■■■□□ 2.77
RPL13-209	ENST00000491523	PHF23	Q9BUL5	403 aa	Predicted RBP	32.32	■■■□□ 2.76
RPL13-209	ENST00000491523	SPATA31A6	Q5VVP1	1343 aa		32.3	■■■□□ 2.76
RPL13-209	ENST00000491523	RALGAPB	Q86X10	1494 aa		32.29	■■■□□ 2.76
RPL13-209	ENST00000491523	TIMELESS	Q9UNS1	1208 aa		32.29	■■■□□ 2.76
RPL13-209	ENST00000491523	ADGRB2	O60241	1585 aa		32.28	■■■□□ 2.76
RPL13-209	ENST00000491523	SHPRH	Q149N8	1683 aa		32.27	■■■□□ 2.76
RPL13-209	ENST00000491523	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.27	■■■□□ 2.76
RPL13-209	ENST00000491523	ILDR2	Q71H61	639 aa		32.27	■■■□□ 2.76
RPL13-209	ENST00000491523	GPRASP1	Q5JY77	1395 aa		32.27	■■■□□ 2.76
RPL13-209	ENST00000491523	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.26	■■■□□ 2.75
RPL13-209	ENST00000491523	LRRC59	Q96AG4	307 aa	Known RBP	32.25	■■■□□ 2.75
RPL13-209	ENST00000491523	FMN2	Q9NZ56	1722 aa		32.25	■■■□□ 2.75
RPL13-209	ENST00000491523	NUTM2F	A1L443	756 aa		32.24	■■■□□ 2.75
RPL13-209	ENST00000491523	ORAI2	Q96SN7	254 aa		32.21	■■■□□ 2.75
RPL13-209	ENST00000491523	CARD11	Q9BXL7	1154 aa		32.21	■■■□□ 2.75
RPL13-209	ENST00000491523	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.21	■■■□□ 2.75
RPL13-209	ENST00000491523	SOS2	Q07890	1332 aa	Predicted RBP	32.18	■■■□□ 2.74
RPL13-209	ENST00000491523	ESCO1	Q5FWF5	840 aa		32.16	■■■□□ 2.74
RPL13-209	ENST00000491523	NPHP3	Q7Z494	1330 aa		32.16	■■■□□ 2.74
RPL13-209	ENST00000491523	EIF3A	Q14152	1382 aa	Known RBP	32.16	■■■□□ 2.74
RPL13-209	ENST00000491523	WASL	O00401	505 aa	Predicted RBP	32.15	■■■□□ 2.74
RPL13-209	ENST00000491523	QRICH2	Q9H0J4	1663 aa		32.14	■■■□□ 2.74
RPL13-209	ENST00000491523	ANKAR	Q7Z5J8	1434 aa		32.12	■■■□□ 2.73
RPL13-209	ENST00000491523	DDX17	Q92841	729 aa	Known RBP	32.12	■■■□□ 2.73
RPL13-209	ENST00000491523	TULP4	Q9NRJ4	1543 aa		32.11	■■■□□ 2.73
RPL13-209	ENST00000491523	SOCS7	O14512	581 aa		32.11	■■■□□ 2.73
RPL13-209	ENST00000491523	KIF1A	Q12756	1690 aa		32.11	■■■□□ 2.73
RPL13-209	ENST00000491523	USP32	Q8NFA0	1604 aa		32.11	■■■□□ 2.73
RPL13-209	ENST00000491523	PNPLA6	Q8IY17	1366 aa		32.09	■■■□□ 2.73
RPL13-209	ENST00000491523	RGS17	Q9UGC6	210 aa	Predicted RBP	32.09	■■■□□ 2.73
RPL13-209	ENST00000491523	LRP6	O75581	1613 aa		32.08	■■■□□ 2.73
RPL13-209	ENST00000491523	PRR36	Q9H6K5	1346 aa		32.07	■■■□□ 2.72
RPL13-209	ENST00000491523	CDK19	Q9BWU1	502 aa		32.07	■■■□□ 2.72
RPL13-209	ENST00000491523	RGPD8	O14715	1765 aa	Predicted RBP	32.04	■■■□□ 2.72
RPL13-209	ENST00000491523	PXDN	Q92626	1479 aa		32.04	■■■□□ 2.72
RPL13-209	ENST00000491523	ATP7B	P35670	1465 aa		32.03	■■■□□ 2.72
RPL13-209	ENST00000491523	MEX3C	Q5U5Q3	659 aa	Known RBP	32.03	■■■□□ 2.72
RPL13-209	ENST00000491523	PHF8	Q9UPP1	1060 aa		32.03	■■■□□ 2.72
RPL13-209	ENST00000491523	FOXO3	O43524	673 aa		32.02	■■■□□ 2.72
RPL13-209	ENST00000491523	NUDT16	Q96DE0	195 aa	Known RBP	31.99	■■■□□ 2.71
RPL13-209	ENST00000491523	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.99	■■■□□ 2.71
RPL13-209	ENST00000491523	SRPK2	P78362	688 aa	Known RBP	31.98	■■■□□ 2.71
RPL13-209	ENST00000491523	ZNF772	Q68DY9	489 aa	Predicted RBP	31.98	■■■□□ 2.71
RPL13-209	ENST00000491523	PMFBP1	Q8TBY8	1022 aa		31.98	■■■□□ 2.71
RPL13-209	ENST00000491523	SBNO2	Q9Y2G9	1366 aa		31.97	■■■□□ 2.71
RPL13-209	ENST00000491523	XPC	Q01831	940 aa	Predicted RBP	31.97	■■■□□ 2.71
RPL13-209	ENST00000491523	CABP2	Q9NPB3	220 aa		31.97	■■■□□ 2.71
RPL13-209	ENST00000491523	EVC2	Q86UK5	1308 aa		31.97	■■■□□ 2.71
RPL13-209	ENST00000491523	USP47	Q96K76	1375 aa		31.96	■■■□□ 2.71
RPL13-209	ENST00000491523	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.95	■■■□□ 2.71
RPL13-209	ENST00000491523	NUTM2E	B1AL46	878 aa	Predicted RBP	31.95	■■■□□ 2.71
RPL13-209	ENST00000491523	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.95	■■■□□ 2.71
RPL13-209	ENST00000491523	TOPAZ1	Q8N9V7	1692 aa		31.93	■■■□□ 2.7
RPL13-209	ENST00000491523	ITSN1	Q15811	1721 aa		31.93	■■■□□ 2.7
RPL13-209	ENST00000491523	ST20-MTHFS	A0A0A6YYL1	179 aa		31.93	■■■□□ 2.7
RPL13-209	ENST00000491523	PSME1	Q06323	249 aa		31.93	■■■□□ 2.7
RPL13-209	ENST00000491523	POTEA	Q6S8J7	498 aa		31.92	■■■□□ 2.7
RPL13-209	ENST00000491523	CCDC61	Q9Y6R9	512 aa		31.9	■■■□□ 2.7
RPL13-209	ENST00000491523	KRT28	Q7Z3Y7	464 aa		31.89	■■■□□ 2.7
RPL13-209	ENST00000491523	SPATA31A3	Q5VYP0	1347 aa		31.89	■■■□□ 2.7
RPL13-209	ENST00000491523	SBNO1	A3KN83	1393 aa		31.89	■■■□□ 2.7
RPL13-209	ENST00000491523	NGDN	Q8NEJ9	315 aa	Known RBP	31.87	■■■□□ 2.69
RPL13-209	ENST00000491523	TESK2	Q96S53	571 aa		31.87	■■■□□ 2.69
RPL13-209	ENST00000491523	PPIP5K1	Q6PFW1	1433 aa		31.86	■■■□□ 2.69
RPL13-209	ENST00000491523	TNS3	Q68CZ2	1445 aa		31.83	■■■□□ 2.69
RPL13-209	ENST00000491523	PLEKHG3	A1L390	1219 aa		31.83	■■■□□ 2.69
RPL13-209	ENST00000491523	AFF2	P51816	1311 aa		31.82	■■■□□ 2.68
RPL13-209	ENST00000491523	POLR3A	O14802	1390 aa	Predicted RBP	31.81	■■■□□ 2.68
RPL13-209	ENST00000491523	ARHGEF10	O15013	1369 aa		31.81	■■■□□ 2.68
RPL13-209	ENST00000491523	ACE	P12821	1306 aa		31.81	■■■□□ 2.68
RPL13-209	ENST00000491523	ATAD2	Q6PL18	1390 aa		31.81	■■■□□ 2.68
RPL13-209	ENST00000491523	C8orf37	Q96NL8	207 aa		31.8	■■■□□ 2.68
RPL13-209	ENST00000491523	CABP1	Q9NZU7	370 aa		31.79	■■■□□ 2.68
RPL13-209	ENST00000491523	ADAMTS2	O95450	1211 aa		31.78	■■■□□ 2.68
RPL13-209	ENST00000491523	NGLY1	Q96IV0	654 aa		31.78	■■■□□ 2.68
RPL13-209	ENST00000491523	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.77	■■■□□ 2.68
RPL13-209	ENST00000491523	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.76	■■■□□ 2.67
RPL13-209	ENST00000491523	SLC24A1	O60721	1099 aa		31.75	■■■□□ 2.67
RPL13-209	ENST00000491523	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.74	■■■□□ 2.67
RPL13-209	ENST00000491523	MARF1	Q9Y4F3	1742 aa	Known RBP	31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms