RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CDC42BPGQ6DT37 1551 aa25.41■■□□□ 1.66
SEC13-218ENST00000490283 LRRC59Q96AG4 307 aaKnown RBP25.4■■□□□ 1.66
SEC13-218ENST00000490283 SIRT1Q96EB6 747 aa25.4■■□□□ 1.66
SEC13-218ENST00000490283 MEX3CQ5U5Q3 659 aaKnown RBP25.39■■□□□ 1.66
SEC13-218ENST00000490283 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
SEC13-218ENST00000490283 ORAI2Q96SN7 254 aa25.37■■□□□ 1.65
SEC13-218ENST00000490283 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
SEC13-218ENST00000490283 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
SEC13-218ENST00000490283 ESCO1Q5FWF5 840 aa25.35■■□□□ 1.65
SEC13-218ENST00000490283 DDX17Q92841 729 aaKnown RBP25.35■■□□□ 1.65
SEC13-218ENST00000490283 POGKQ9P215 609 aa25.34■■□□□ 1.65
SEC13-218ENST00000490283 RGS17Q9UGC6 210 aaPredicted RBP25.33■■□□□ 1.65
SEC13-218ENST00000490283 PRAM1Q96QH2 718 aa25.32■■□□□ 1.64
SEC13-218ENST00000490283 NUTM2FA1L443 756 aa25.31■■□□□ 1.64
SEC13-218ENST00000490283 NUTM2BA6NNL0 878 aaPredicted RBP25.31■■□□□ 1.64
SEC13-218ENST00000490283 NUTM2EB1AL46 878 aaPredicted RBP25.31■■□□□ 1.64
SEC13-218ENST00000490283 NUTM2AQ8IVF1 878 aaPredicted RBP25.31■■□□□ 1.64
SEC13-218ENST00000490283 SAFB2Q14151 953 aaKnown RBP eCLIP25.3■■□□□ 1.64
SEC13-218ENST00000490283 DLC1Q96QB1 1528 aa25.3■■□□□ 1.64
SEC13-218ENST00000490283 NPHP3Q7Z494 1330 aa25.3■■□□□ 1.64
SEC13-218ENST00000490283 TRAK1Q9UPV9 953 aa25.29■■□□□ 1.64
SEC13-218ENST00000490283 LRP6O75581 1613 aa25.29■■□□□ 1.64
SEC13-218ENST00000490283 ADGRB1O14514 1584 aa25.28■■□□□ 1.64
SEC13-218ENST00000490283 SOS2Q07890 1332 aaPredicted RBP25.28■■□□□ 1.64
SEC13-218ENST00000490283 PNPLA6Q8IY17 1366 aa25.28■■□□□ 1.64
SEC13-218ENST00000490283 ZNF772Q68DY9 489 aaPredicted RBP25.24■■□□□ 1.63
SEC13-218ENST00000490283 POTEAQ6S8J7 498 aa25.24■■□□□ 1.63
SEC13-218ENST00000490283 FOXO3O43524 673 aa25.23■■□□□ 1.63
SEC13-218ENST00000490283 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
SEC13-218ENST00000490283 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
SEC13-218ENST00000490283 KIF1AQ12756 1690 aa25.18■■□□□ 1.62
SEC13-218ENST00000490283 XPCQ01831 940 aaPredicted RBP25.18■■□□□ 1.62
SEC13-218ENST00000490283 MINK1Q8N4C8 1332 aaPredicted RBP25.17■■□□□ 1.62
SEC13-218ENST00000490283 PHF8Q9UPP1 1060 aa25.17■■□□□ 1.62
SEC13-218ENST00000490283 PXDNQ92626 1479 aa25.16■■□□□ 1.62
SEC13-218ENST00000490283 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
SEC13-218ENST00000490283 ANKARQ7Z5J8 1434 aa25.16■■□□□ 1.62
SEC13-218ENST00000490283 C8orf37Q96NL8 207 aa25.16■■□□□ 1.62
SEC13-218ENST00000490283 HIRIP3Q9BW71 556 aaPredicted RBP25.16■■□□□ 1.62
SEC13-218ENST00000490283 ADGRB2O60241 1585 aa25.15■■□□□ 1.62
SEC13-218ENST00000490283 ADAMTS2O95450 1211 aa25.14■■□□□ 1.62
SEC13-218ENST00000490283 NEUROD1Q13562 356 aa25.14■■□□□ 1.62
SEC13-218ENST00000490283 AFF2P51816 1311 aa25.13■■□□□ 1.61
SEC13-218ENST00000490283 PSME1Q06323 249 aa25.13■■□□□ 1.61
SEC13-218ENST00000490283 KIAA1210Q9ULL0 1709 aa25.12■■□□□ 1.61
SEC13-218ENST00000490283 KRT28Q7Z3Y7 464 aa25.12■■□□□ 1.61
SEC13-218ENST00000490283 SIN3AQ96ST3 1273 aa25.12■■□□□ 1.61
SEC13-218ENST00000490283 WASLO00401 505 aaPredicted RBP25.11■■□□□ 1.61
SEC13-218ENST00000490283 L3MBTL2Q969R5 705 aa25.11■■□□□ 1.61
SEC13-218ENST00000490283 NGLY1Q96IV0 654 aa25.11■■□□□ 1.61
SEC13-218ENST00000490283 COL22A1Q8NFW1 1626 aaPredicted RBP25.08■■□□□ 1.61
SEC13-218ENST00000490283 ARHGEF28Q8N1W1 1705 aaKnown RBP25.08■■□□□ 1.61
SEC13-218ENST00000490283 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.6
SEC13-218ENST00000490283 TULP4Q9NRJ4 1543 aa25.07■■□□□ 1.6
SEC13-218ENST00000490283 RXRBP28702 533 aa25.07■■□□□ 1.6
SEC13-218ENST00000490283 NBPF1Q3BBV0 1214 aa25.07■■□□□ 1.6
SEC13-218ENST00000490283 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
SEC13-218ENST00000490283 TNS3Q68CZ2 1445 aa25.04■■□□□ 1.6
SEC13-218ENST00000490283 SBNO1A3KN83 1393 aa25.04■■□□□ 1.6
SEC13-218ENST00000490283 GPRASP1Q5JY77 1395 aa25.04■■□□□ 1.6
SEC13-218ENST00000490283 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
SEC13-218ENST00000490283 HAP1P54257 671 aaPredicted RBP25.03■■□□□ 1.6
SEC13-218ENST00000490283 LMOD2Q6P5Q4 547 aa25.03■■□□□ 1.6
SEC13-218ENST00000490283 USP32Q8NFA0 1604 aa25.02■■□□□ 1.6
SEC13-218ENST00000490283 QTRT2Q9H974 415 aaKnown RBP25.02■■□□□ 1.6
SEC13-218ENST00000490283 ARHGEF10O15013 1369 aa25.02■■□□□ 1.6
SEC13-218ENST00000490283 NGDNQ8NEJ9 315 aaKnown RBP25.01■■□□□ 1.59
SEC13-218ENST00000490283 USP21Q9UK80 565 aa25.01■■□□□ 1.59
SEC13-218ENST00000490283 PRR36Q9H6K5 1346 aa25.01■■□□□ 1.59
SEC13-218ENST00000490283 CENPJQ9HC77 1338 aaPredicted RBP25■■□□□ 1.59
SEC13-218ENST00000490283 NUDT16Q96DE0 195 aaKnown RBP24.99■■□□□ 1.59
SEC13-218ENST00000490283 CDK19Q9BWU1 502 aa24.99■■□□□ 1.59
SEC13-218ENST00000490283 RBM6P78332 1123 aaKnown RBP24.98■■□□□ 1.59
SEC13-218ENST00000490283 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
SEC13-218ENST00000490283 FNBP4Q8N3X1 1017 aaPredicted RBP24.97■■□□□ 1.59
SEC13-218ENST00000490283 TONSLQ96HA7 1378 aa24.96■■□□□ 1.59
SEC13-218ENST00000490283 TRPC5Q9UL62 973 aaPredicted RBP24.96■■□□□ 1.59
SEC13-218ENST00000490283 ATP7BP35670 1465 aa24.96■■□□□ 1.59
SEC13-218ENST00000490283 CDK12Q9NYV4 1490 aaPredicted RBP24.96■■□□□ 1.59
SEC13-218ENST00000490283 PLEKHG5O94827 1062 aa24.95■■□□□ 1.58
SEC13-218ENST00000490283 ITSN1Q15811 1721 aa24.93■■□□□ 1.58
SEC13-218ENST00000490283 SRPK2P78362 688 aaKnown RBP24.93■■□□□ 1.58
SEC13-218ENST00000490283 CCDC61Q9Y6R9 512 aa24.93■■□□□ 1.58
SEC13-218ENST00000490283 PAK3O75914 559 aaPredicted RBP24.92■■□□□ 1.58
SEC13-218ENST00000490283 TRPM1Q7Z4N2 1603 aa24.91■■□□□ 1.58
SEC13-218ENST00000490283 CABLES1Q8TDN4 633 aa24.9■■□□□ 1.58
SEC13-218ENST00000490283 MARF1Q9Y4F3 1742 aaKnown RBP24.88■■□□□ 1.57
SEC13-218ENST00000490283 ATRNO75882 1429 aa24.87■■□□□ 1.57
SEC13-218ENST00000490283 QRICH2Q9H0J4 1663 aa24.86■■□□□ 1.57
SEC13-218ENST00000490283 TRPM3Q9HCF6 1732 aaPredicted RBP24.86■■□□□ 1.57
SEC13-218ENST00000490283 RGS12O14924 1447 aa24.86■■□□□ 1.57
SEC13-218ENST00000490283 EVC2Q86UK5 1308 aa24.86■■□□□ 1.57
SEC13-218ENST00000490283 BCL9LQ86UU0 1499 aa24.85■■□□□ 1.57
SEC13-218ENST00000490283 PLEKHG3A1L390 1219 aa24.85■■□□□ 1.57
SEC13-218ENST00000490283 UNC5CLQ8IV45 518 aa24.85■■□□□ 1.57
SEC13-218ENST00000490283 ACEP12821 1306 aa24.85■■□□□ 1.57
SEC13-218ENST00000490283 POLR3AO14802 1390 aaPredicted RBP24.84■■□□□ 1.57
SEC13-218ENST00000490283 NBPF8Q3BBV2 869 aa24.84■■□□□ 1.57
SEC13-218ENST00000490283 CABP2Q9NPB3 220 aa24.84■■□□□ 1.57
SEC13-218ENST00000490283 PPIP5K1Q6PFW1 1433 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms