RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 POGKQ9P215 609 aa25.89■■□□□ 1.74
ABCF3-217ENST00000489719 PLEKHH1Q9ULM0 1364 aa25.88■■□□□ 1.73
ABCF3-217ENST00000489719 AHDC1Q5TGY3 1603 aaPredicted RBP25.88■■□□□ 1.73
ABCF3-217ENST00000489719 NUTM2FA1L443 756 aa25.87■■□□□ 1.73
ABCF3-217ENST00000489719 MEX3CQ5U5Q3 659 aaKnown RBP25.87■■□□□ 1.73
ABCF3-217ENST00000489719 PRAM1Q96QH2 718 aa25.87■■□□□ 1.73
ABCF3-217ENST00000489719 NALCNQ8IZF0 1738 aa25.86■■□□□ 1.73
ABCF3-217ENST00000489719 RGS17Q9UGC6 210 aaPredicted RBP25.86■■□□□ 1.73
ABCF3-217ENST00000489719 TRAK1Q9UPV9 953 aa25.86■■□□□ 1.73
ABCF3-217ENST00000489719 SAFB2Q14151 953 aaKnown RBP eCLIP25.85■■□□□ 1.73
ABCF3-217ENST00000489719 COL16A1Q07092 1604 aaPredicted RBP25.85■■□□□ 1.73
ABCF3-217ENST00000489719 NUTM2BA6NNL0 878 aaPredicted RBP25.84■■□□□ 1.73
ABCF3-217ENST00000489719 NUTM2EB1AL46 878 aaPredicted RBP25.84■■□□□ 1.73
ABCF3-217ENST00000489719 NUTM2AQ8IVF1 878 aaPredicted RBP25.84■■□□□ 1.73
ABCF3-217ENST00000489719 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
ABCF3-217ENST00000489719 FOXO3O43524 673 aa25.79■■□□□ 1.72
ABCF3-217ENST00000489719 SOS2Q07890 1332 aaPredicted RBP25.79■■□□□ 1.72
ABCF3-217ENST00000489719 NPHP3Q7Z494 1330 aa25.79■■□□□ 1.72
ABCF3-217ENST00000489719 LAMC1P11047 1609 aa25.77■■□□□ 1.72
ABCF3-217ENST00000489719 NEUROD1Q13562 356 aa25.76■■□□□ 1.71
ABCF3-217ENST00000489719 POTEAQ6S8J7 498 aa25.76■■□□□ 1.71
ABCF3-217ENST00000489719 CDC42BPGQ6DT37 1551 aa25.75■■□□□ 1.71
ABCF3-217ENST00000489719 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
ABCF3-217ENST00000489719 KNDC1Q76NI1 1749 aa25.73■■□□□ 1.71
ABCF3-217ENST00000489719 PNPLA6Q8IY17 1366 aa25.72■■□□□ 1.71
ABCF3-217ENST00000489719 XPCQ01831 940 aaPredicted RBP25.72■■□□□ 1.71
ABCF3-217ENST00000489719 ZNF772Q68DY9 489 aaPredicted RBP25.72■■□□□ 1.71
ABCF3-217ENST00000489719 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
ABCF3-217ENST00000489719 NHSL1Q5SYE7 1610 aa25.71■■□□□ 1.71
ABCF3-217ENST00000489719 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
ABCF3-217ENST00000489719 ADGRB1O14514 1584 aa25.71■■□□□ 1.71
ABCF3-217ENST00000489719 L3MBTL2Q969R5 705 aa25.71■■□□□ 1.71
ABCF3-217ENST00000489719 PHF8Q9UPP1 1060 aa25.71■■□□□ 1.71
ABCF3-217ENST00000489719 DLC1Q96QB1 1528 aa25.71■■□□□ 1.71
ABCF3-217ENST00000489719 LRP6O75581 1613 aa25.69■■□□□ 1.7
ABCF3-217ENST00000489719 KRT28Q7Z3Y7 464 aa25.68■■□□□ 1.7
ABCF3-217ENST00000489719 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
ABCF3-217ENST00000489719 ADAMTS2O95450 1211 aa25.67■■□□□ 1.7
ABCF3-217ENST00000489719 NBPF1Q3BBV0 1214 aa25.67■■□□□ 1.7
ABCF3-217ENST00000489719 WASLO00401 505 aaPredicted RBP25.66■■□□□ 1.7
ABCF3-217ENST00000489719 PSME1Q06323 249 aa25.66■■□□□ 1.7
ABCF3-217ENST00000489719 C8orf37Q96NL8 207 aa25.66■■□□□ 1.7
ABCF3-217ENST00000489719 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
ABCF3-217ENST00000489719 AFF2P51816 1311 aa25.63■■□□□ 1.69
ABCF3-217ENST00000489719 PMFBP1Q8TBY8 1022 aa25.62■■□□□ 1.69
ABCF3-217ENST00000489719 EIF3AQ14152 1382 aaKnown RBP25.61■■□□□ 1.69
ABCF3-217ENST00000489719 ANKARQ7Z5J8 1434 aa25.59■■□□□ 1.69
ABCF3-217ENST00000489719 SPATA31A3Q5VYP0 1347 aa25.59■■□□□ 1.69
ABCF3-217ENST00000489719 PXDNQ92626 1479 aa25.59■■□□□ 1.69
ABCF3-217ENST00000489719 FMN2Q9NZ56 1722 aa25.58■■□□□ 1.69
ABCF3-217ENST00000489719 RXRBP28702 533 aa25.58■■□□□ 1.69
ABCF3-217ENST00000489719 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
ABCF3-217ENST00000489719 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
ABCF3-217ENST00000489719 QTRT2Q9H974 415 aaKnown RBP25.56■■□□□ 1.68
ABCF3-217ENST00000489719 NGDNQ8NEJ9 315 aaKnown RBP25.55■■□□□ 1.68
ABCF3-217ENST00000489719 NUDT16Q96DE0 195 aaKnown RBP25.54■■□□□ 1.68
ABCF3-217ENST00000489719 PRR36Q9H6K5 1346 aa25.54■■□□□ 1.68
ABCF3-217ENST00000489719 HAP1P54257 671 aaPredicted RBP25.53■■□□□ 1.68
ABCF3-217ENST00000489719 USP21Q9UK80 565 aa25.52■■□□□ 1.68
ABCF3-217ENST00000489719 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
ABCF3-217ENST00000489719 CENPJQ9HC77 1338 aaPredicted RBP25.51■■□□□ 1.67
ABCF3-217ENST00000489719 SBNO1A3KN83 1393 aa25.51■■□□□ 1.67
ABCF3-217ENST00000489719 ADGRB2O60241 1585 aa25.5■■□□□ 1.67
ABCF3-217ENST00000489719 PLEKHG5O94827 1062 aa25.5■■□□□ 1.67
ABCF3-217ENST00000489719 KIF1AQ12756 1690 aa25.5■■□□□ 1.67
ABCF3-217ENST00000489719 KIAA1210Q9ULL0 1709 aa25.49■■□□□ 1.67
ABCF3-217ENST00000489719 FNBP4Q8N3X1 1017 aaPredicted RBP25.49■■□□□ 1.67
ABCF3-217ENST00000489719 CCDC61Q9Y6R9 512 aa25.48■■□□□ 1.67
ABCF3-217ENST00000489719 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
ABCF3-217ENST00000489719 RBM6P78332 1123 aaKnown RBP25.47■■□□□ 1.67
ABCF3-217ENST00000489719 TNS3Q68CZ2 1445 aa25.46■■□□□ 1.67
ABCF3-217ENST00000489719 ROCK2O75116 1388 aaKnown RBP25.46■■□□□ 1.67
ABCF3-217ENST00000489719 TONSLQ96HA7 1378 aa25.46■■□□□ 1.67
ABCF3-217ENST00000489719 PAK3O75914 559 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-217ENST00000489719 SRPK2P78362 688 aaKnown RBP25.46■■□□□ 1.67
ABCF3-217ENST00000489719 TRPC5Q9UL62 973 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-217ENST00000489719 ARHGEF10O15013 1369 aa25.45■■□□□ 1.67
ABCF3-217ENST00000489719 CABLES1Q8TDN4 633 aa25.45■■□□□ 1.66
ABCF3-217ENST00000489719 NBPF8Q3BBV2 869 aa25.44■■□□□ 1.66
ABCF3-217ENST00000489719 COL22A1Q8NFW1 1626 aaPredicted RBP25.43■■□□□ 1.66
ABCF3-217ENST00000489719 RGPD8O14715 1765 aaPredicted RBP25.43■■□□□ 1.66
ABCF3-217ENST00000489719 ARHGEF28Q8N1W1 1705 aaKnown RBP25.42■■□□□ 1.66
ABCF3-217ENST00000489719 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
ABCF3-217ENST00000489719 PLEKHG3A1L390 1219 aa25.41■■□□□ 1.66
ABCF3-217ENST00000489719 CABP2Q9NPB3 220 aa25.41■■□□□ 1.66
ABCF3-217ENST00000489719 ACEP12821 1306 aa25.38■■□□□ 1.65
ABCF3-217ENST00000489719 EVC2Q86UK5 1308 aa25.37■■□□□ 1.65
ABCF3-217ENST00000489719 CARD11Q9BXL7 1154 aa25.37■■□□□ 1.65
ABCF3-217ENST00000489719 ATP7BP35670 1465 aa25.36■■□□□ 1.65
ABCF3-217ENST00000489719 UNC5CLQ8IV45 518 aa25.36■■□□□ 1.65
ABCF3-217ENST00000489719 CDK12Q9NYV4 1490 aaPredicted RBP25.34■■□□□ 1.65
ABCF3-217ENST00000489719 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
ABCF3-217ENST00000489719 CABP1Q9NZU7 370 aa25.33■■□□□ 1.65
ABCF3-217ENST00000489719 BCL9LQ86UU0 1499 aa25.33■■□□□ 1.65
ABCF3-217ENST00000489719 FAM83GA6ND36 823 aa25.32■■□□□ 1.64
ABCF3-217ENST00000489719 GJD4Q96KN9 370 aaPredicted RBP25.32■■□□□ 1.64
ABCF3-217ENST00000489719 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
ABCF3-217ENST00000489719 ATRNO75882 1429 aa25.3■■□□□ 1.64
ABCF3-217ENST00000489719 TRPM1Q7Z4N2 1603 aa25.3■■□□□ 1.64
ABCF3-217ENST00000489719 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms