RNA–Protein interactions for RNA: ENST00000489710.1

ERI3-208, Transcript of ERI1 exoribonuclease family member 3, human

TSL 3

Gene ERI3, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERI3-208	ENST00000489710	PRAM1	Q96QH2	718 aa		14.02	□□□□□ -0.17
ERI3-208	ENST00000489710	POGK	Q9P215	609 aa		14.02	□□□□□ -0.17
ERI3-208	ENST00000489710	TRAK1	Q9UPV9	953 aa		14.02	□□□□□ -0.17
ERI3-208	ENST00000489710	MST1R	Q04912	1400 aa		14.01	□□□□□ -0.17
ERI3-208	ENST00000489710	CCER1	Q8TC90	406 aa	Predicted RBP	14.01	□□□□□ -0.17
ERI3-208	ENST00000489710	ARHGEF28	Q8N1W1	1705 aa	Known RBP	14.01	□□□□□ -0.17
ERI3-208	ENST00000489710	HSPA1L	P34931	641 aa		14	□□□□□ -0.17
ERI3-208	ENST00000489710	NBPF1	Q3BBV0	1214 aa		13.99	□□□□□ -0.17
ERI3-208	ENST00000489710	ADGRB2	O60241	1585 aa		13.98	□□□□□ -0.17
ERI3-208	ENST00000489710	TIMELESS	Q9UNS1	1208 aa		13.98	□□□□□ -0.17
ERI3-208	ENST00000489710	C1orf167	Q5SNV9	1468 aa		13.98	□□□□□ -0.17
ERI3-208	ENST00000489710	ROCK2	O75116	1388 aa	Known RBP	13.97	□□□□□ -0.17
ERI3-208	ENST00000489710	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
ERI3-208	ENST00000489710	FMN2	Q9NZ56	1722 aa		13.97	□□□□□ -0.17
ERI3-208	ENST00000489710	NBPF8	Q3BBV2	869 aa		13.96	□□□□□ -0.17
ERI3-208	ENST00000489710	BRINP3	Q76B58	766 aa		13.96	□□□□□ -0.17
ERI3-208	ENST00000489710	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.96	□□□□□ -0.17
ERI3-208	ENST00000489710	PHLPP1	O60346	1717 aa		13.95	□□□□□ -0.18
ERI3-208	ENST00000489710	RALGAPB	Q86X10	1494 aa		13.95	□□□□□ -0.18
ERI3-208	ENST00000489710	GPRASP1	Q5JY77	1395 aa		13.95	□□□□□ -0.18
ERI3-208	ENST00000489710	EIF3A	Q14152	1382 aa	Known RBP	13.94	□□□□□ -0.18
ERI3-208	ENST00000489710	NHSL1	Q5SYE7	1610 aa		13.93	□□□□□ -0.18
ERI3-208	ENST00000489710	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.92	□□□□□ -0.18
ERI3-208	ENST00000489710	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.92	□□□□□ -0.18
ERI3-208	ENST00000489710	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.92	□□□□□ -0.18
ERI3-208	ENST00000489710	COL16A1	Q07092	1604 aa	Predicted RBP	13.92	□□□□□ -0.18
ERI3-208	ENST00000489710	QRICH2	Q9H0J4	1663 aa		13.91	□□□□□ -0.18
ERI3-208	ENST00000489710	ANKAR	Q7Z5J8	1434 aa		13.91	□□□□□ -0.18
ERI3-208	ENST00000489710	ESCO1	Q5FWF5	840 aa		13.91	□□□□□ -0.18
ERI3-208	ENST00000489710	CARD11	Q9BXL7	1154 aa		13.91	□□□□□ -0.18
ERI3-208	ENST00000489710	KIF1A	Q12756	1690 aa		13.91	□□□□□ -0.18
ERI3-208	ENST00000489710	NUTM2F	A1L443	756 aa		13.9	□□□□□ -0.18
ERI3-208	ENST00000489710	WASL	O00401	505 aa	Predicted RBP	13.9	□□□□□ -0.18
ERI3-208	ENST00000489710	ORAI2	Q96SN7	254 aa		13.9	□□□□□ -0.18
ERI3-208	ENST00000489710	TULP4	Q9NRJ4	1543 aa		13.9	□□□□□ -0.19
ERI3-208	ENST00000489710	RGPD8	O14715	1765 aa	Predicted RBP	13.88	□□□□□ -0.19
ERI3-208	ENST00000489710	USP32	Q8NFA0	1604 aa		13.88	□□□□□ -0.19
ERI3-208	ENST00000489710	NPHP3	Q7Z494	1330 aa		13.88	□□□□□ -0.19
ERI3-208	ENST00000489710	JCAD	Q9P266	1359 aa		13.87	□□□□□ -0.19
ERI3-208	ENST00000489710	ITSN1	Q15811	1721 aa		13.87	□□□□□ -0.19
ERI3-208	ENST00000489710	SHPRH	Q149N8	1683 aa		13.86	□□□□□ -0.19
ERI3-208	ENST00000489710	CDK19	Q9BWU1	502 aa		13.86	□□□□□ -0.19
ERI3-208	ENST00000489710	PHF8	Q9UPP1	1060 aa		13.86	□□□□□ -0.19
ERI3-208	ENST00000489710	DDX17	Q92841	729 aa	Known RBP	13.85	□□□□□ -0.19
ERI3-208	ENST00000489710	LRRC59	Q96AG4	307 aa	Known RBP	13.85	□□□□□ -0.19
ERI3-208	ENST00000489710	ATP7B	P35670	1465 aa		13.85	□□□□□ -0.19
ERI3-208	ENST00000489710	SOS2	Q07890	1332 aa	Predicted RBP	13.85	□□□□□ -0.19
ERI3-208	ENST00000489710	SBNO2	Q9Y2G9	1366 aa		13.84	□□□□□ -0.19
ERI3-208	ENST00000489710	FOXO3	O43524	673 aa		13.84	□□□□□ -0.19
ERI3-208	ENST00000489710	PXDN	Q92626	1479 aa		13.84	□□□□□ -0.19
ERI3-208	ENST00000489710	PRR36	Q9H6K5	1346 aa		13.84	□□□□□ -0.19
ERI3-208	ENST00000489710	SRPK2	P78362	688 aa	Known RBP	13.83	□□□□□ -0.2
ERI3-208	ENST00000489710	NUDT16	Q96DE0	195 aa	Known RBP	13.83	□□□□□ -0.2
ERI3-208	ENST00000489710	EVC2	Q86UK5	1308 aa		13.83	□□□□□ -0.2
ERI3-208	ENST00000489710	MED1	Q15648	1581 aa	Predicted RBP	13.83	□□□□□ -0.2
ERI3-208	ENST00000489710	TOPAZ1	Q8N9V7	1692 aa		13.82	□□□□□ -0.2
ERI3-208	ENST00000489710	SPATA31A6	Q5VVP1	1343 aa		13.82	□□□□□ -0.2
ERI3-208	ENST00000489710	CCDC61	Q9Y6R9	512 aa		13.81	□□□□□ -0.2
ERI3-208	ENST00000489710	SLC24A1	O60721	1099 aa		13.8	□□□□□ -0.2
ERI3-208	ENST00000489710	PSME1	Q06323	249 aa		13.8	□□□□□ -0.2
ERI3-208	ENST00000489710	PMFBP1	Q8TBY8	1022 aa		13.8	□□□□□ -0.2
ERI3-208	ENST00000489710	USP47	Q96K76	1375 aa		13.8	□□□□□ -0.2
ERI3-208	ENST00000489710	XPC	Q01831	940 aa	Predicted RBP	13.79	□□□□□ -0.2
ERI3-208	ENST00000489710	KRT28	Q7Z3Y7	464 aa		13.79	□□□□□ -0.2
ERI3-208	ENST00000489710	NGDN	Q8NEJ9	315 aa	Known RBP	13.79	□□□□□ -0.2
ERI3-208	ENST00000489710	CABP2	Q9NPB3	220 aa		13.79	□□□□□ -0.2
ERI3-208	ENST00000489710	PNPLA6	Q8IY17	1366 aa		13.79	□□□□□ -0.2
ERI3-208	ENST00000489710	ST20-MTHFS	A0A0A6YYL1	179 aa		13.78	□□□□□ -0.2
ERI3-208	ENST00000489710	SBNO1	A3KN83	1393 aa		13.78	□□□□□ -0.2
ERI3-208	ENST00000489710	PPIP5K1	Q6PFW1	1433 aa		13.78	□□□□□ -0.2
ERI3-208	ENST00000489710	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.78	□□□□□ -0.2
ERI3-208	ENST00000489710	PLEKHG3	A1L390	1219 aa		13.77	□□□□□ -0.21
ERI3-208	ENST00000489710	TNS3	Q68CZ2	1445 aa		13.77	□□□□□ -0.21
ERI3-208	ENST00000489710	ATAD2	Q6PL18	1390 aa		13.77	□□□□□ -0.21
ERI3-208	ENST00000489710	DISP3	Q9P2K9	1392 aa		13.77	□□□□□ -0.21
ERI3-208	ENST00000489710	POLR3A	O14802	1390 aa	Predicted RBP	13.76	□□□□□ -0.21
ERI3-208	ENST00000489710	SPATA31A3	Q5VYP0	1347 aa		13.76	□□□□□ -0.21
ERI3-208	ENST00000489710	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.76	□□□□□ -0.21
ERI3-208	ENST00000489710	ACE	P12821	1306 aa		13.75	□□□□□ -0.21
ERI3-208	ENST00000489710	TESK2	Q96S53	571 aa		13.75	□□□□□ -0.21
ERI3-208	ENST00000489710	PHF23	Q9BUL5	403 aa	Predicted RBP	13.75	□□□□□ -0.21
ERI3-208	ENST00000489710	LRP6	O75581	1613 aa		13.75	□□□□□ -0.21
ERI3-208	ENST00000489710	ARHGEF10	O15013	1369 aa		13.74	□□□□□ -0.21
ERI3-208	ENST00000489710	PUS7	Q96PZ0	661 aa	Known RBP	13.74	□□□□□ -0.21
ERI3-208	ENST00000489710	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.73	□□□□□ -0.21
ERI3-208	ENST00000489710	NUTM2E	B1AL46	878 aa	Predicted RBP	13.73	□□□□□ -0.21
ERI3-208	ENST00000489710	MEX3C	Q5U5Q3	659 aa	Known RBP	13.73	□□□□□ -0.21
ERI3-208	ENST00000489710	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.73	□□□□□ -0.21
ERI3-208	ENST00000489710	CABP1	Q9NZU7	370 aa		13.73	□□□□□ -0.21
ERI3-208	ENST00000489710	ALS2	Q96Q42	1657 aa		13.72	□□□□□ -0.21
ERI3-208	ENST00000489710	TMF1	P82094	1093 aa		13.72	□□□□□ -0.21
ERI3-208	ENST00000489710	BRD4	O60885	1362 aa	Predicted RBP	13.71	□□□□□ -0.21
ERI3-208	ENST00000489710	PAK3	O75914	559 aa	Predicted RBP	13.71	□□□□□ -0.21
ERI3-208	ENST00000489710	LMOD2	Q6P5Q4	547 aa		13.71	□□□□□ -0.21
ERI3-208	ENST00000489710	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	4e-7	■■□□□ 12.3
ERI3-208	ENST00000489710	CDCA8	Q53HL2	280 aa		13.7	□□□□□ -0.22
ERI3-208	ENST00000489710	AKAP12	Q02952	1782 aa		13.7	□□□□□ -0.22
ERI3-208	ENST00000489710	NINL	Q9Y2I6	1382 aa		13.7	□□□□□ -0.22
ERI3-208	ENST00000489710	ZNF692	Q9BU19	519 aa	Predicted RBP	13.69	□□□□□ -0.22
ERI3-208	ENST00000489710	USP6	P35125	1406 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms