RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 DLC1Q96QB1 1528 aa34.73■■■■□ 3.15
PTPN18-213ENST00000489215 ADGRB1O14514 1584 aa34.71■■■■□ 3.15
PTPN18-213ENST00000489215 NHSL1Q5SYE7 1610 aa34.71■■■■□ 3.15
PTPN18-213ENST00000489215 POGKQ9P215 609 aa34.71■■■■□ 3.15
PTPN18-213ENST00000489215 LRRC59Q96AG4 307 aaKnown RBP34.7■■■■□ 3.15
PTPN18-213ENST00000489215 PLEKHH1Q9ULM0 1364 aa34.7■■■■□ 3.15
PTPN18-213ENST00000489215 SPATA31A6Q5VVP1 1343 aa34.69■■■■□ 3.14
PTPN18-213ENST00000489215 PRAM1Q96QH2 718 aa34.68■■■■□ 3.14
PTPN18-213ENST00000489215 ORAI2Q96SN7 254 aa34.66■■■■□ 3.14
PTPN18-213ENST00000489215 TRAK1Q9UPV9 953 aa34.65■■■■□ 3.14
PTPN18-213ENST00000489215 KIAA1210Q9ULL0 1709 aa34.64■■■■□ 3.14
PTPN18-213ENST00000489215 SHPRHQ149N8 1683 aa34.64■■■■□ 3.14
PTPN18-213ENST00000489215 ESCO1Q5FWF5 840 aa34.64■■■■□ 3.14
PTPN18-213ENST00000489215 ILDR2Q71H61 639 aa34.6■■■■□ 3.13
PTPN18-213ENST00000489215 FMN2Q9NZ56 1722 aa34.59■■■■□ 3.13
PTPN18-213ENST00000489215 SIN3AQ96ST3 1273 aa34.59■■■■□ 3.13
PTPN18-213ENST00000489215 NPHP3Q7Z494 1330 aa34.58■■■■□ 3.13
PTPN18-213ENST00000489215 SOS2Q07890 1332 aaPredicted RBP34.57■■■■□ 3.13
PTPN18-213ENST00000489215 NEUROD1Q13562 356 aa34.57■■■■□ 3.12
PTPN18-213ENST00000489215 SAFB2Q14151 953 aaKnown RBP eCLIP34.57■■■■□ 3.12
PTPN18-213ENST00000489215 L3MBTL2Q969R5 705 aa34.57■■■■□ 3.12
PTPN18-213ENST00000489215 DDX17Q92841 729 aaKnown RBP34.55■■■■□ 3.12
PTPN18-213ENST00000489215 NUTM2FA1L443 756 aa34.54■■■■□ 3.12
PTPN18-213ENST00000489215 EIF3AQ14152 1382 aaKnown RBP34.52■■■■□ 3.12
PTPN18-213ENST00000489215 ADGRB2O60241 1585 aa34.52■■■■□ 3.12
PTPN18-213ENST00000489215 MEX3CQ5U5Q3 659 aaKnown RBP34.5■■■■□ 3.11
PTPN18-213ENST00000489215 KIF1AQ12756 1690 aa34.5■■■■□ 3.11
PTPN18-213ENST00000489215 FOXO3O43524 673 aa34.49■■■■□ 3.11
PTPN18-213ENST00000489215 ANKARQ7Z5J8 1434 aa34.47■■■■□ 3.11
PTPN18-213ENST00000489215 ARHGEF28Q8N1W1 1705 aaKnown RBP34.47■■■■□ 3.11
PTPN18-213ENST00000489215 PNPLA6Q8IY17 1366 aa34.47■■■■□ 3.11
PTPN18-213ENST00000489215 MINK1Q8N4C8 1332 aaPredicted RBP34.46■■■■□ 3.11
PTPN18-213ENST00000489215 NBPF1Q3BBV0 1214 aa34.44■■■■□ 3.1
PTPN18-213ENST00000489215 RGS17Q9UGC6 210 aaPredicted RBP34.44■■■■□ 3.1
PTPN18-213ENST00000489215 PHF8Q9UPP1 1060 aa34.44■■■■□ 3.1
PTPN18-213ENST00000489215 NUTM2BA6NNL0 878 aaPredicted RBP34.43■■■■□ 3.1
PTPN18-213ENST00000489215 NUTM2EB1AL46 878 aaPredicted RBP34.43■■■■□ 3.1
PTPN18-213ENST00000489215 WASLO00401 505 aaPredicted RBP34.43■■■■□ 3.1
PTPN18-213ENST00000489215 NUTM2AQ8IVF1 878 aaPredicted RBP34.43■■■■□ 3.1
PTPN18-213ENST00000489215 HIRIP3Q9BW71 556 aaPredicted RBP34.42■■■■□ 3.1
PTPN18-213ENST00000489215 RGPD8O14715 1765 aaPredicted RBP34.41■■■■□ 3.1
PTPN18-213ENST00000489215 LRP6O75581 1613 aa34.41■■■■□ 3.1
PTPN18-213ENST00000489215 SOCS7O14512 581 aa34.41■■■■□ 3.1
PTPN18-213ENST00000489215 PXDNQ92626 1479 aa34.4■■■■□ 3.1
PTPN18-213ENST00000489215 PSME1Q06323 249 aa34.4■■■■□ 3.1
PTPN18-213ENST00000489215 ZNF772Q68DY9 489 aaPredicted RBP34.38■■■■□ 3.09
PTPN18-213ENST00000489215 TONSLQ96HA7 1378 aa34.36■■■■□ 3.09
PTPN18-213ENST00000489215 KRT28Q7Z3Y7 464 aa34.36■■■■□ 3.09
PTPN18-213ENST00000489215 TULP4Q9NRJ4 1543 aa34.35■■■■□ 3.09
PTPN18-213ENST00000489215 TRPM1Q7Z4N2 1603 aa34.33■■■■□ 3.09
PTPN18-213ENST00000489215 COL22A1Q8NFW1 1626 aaPredicted RBP34.33■■■■□ 3.09
PTPN18-213ENST00000489215 XPCQ01831 940 aaPredicted RBP34.32■■■■□ 3.08
PTPN18-213ENST00000489215 USP32Q8NFA0 1604 aa34.32■■■■□ 3.08
PTPN18-213ENST00000489215 CENPJQ9HC77 1338 aaPredicted RBP34.31■■■■□ 3.08
PTPN18-213ENST00000489215 ROCK2O75116 1388 aaKnown RBP34.3■■■■□ 3.08
PTPN18-213ENST00000489215 SPATA31A3Q5VYP0 1347 aa34.3■■■■□ 3.08
PTPN18-213ENST00000489215 POTEAQ6S8J7 498 aa34.29■■■■□ 3.08
PTPN18-213ENST00000489215 PMFBP1Q8TBY8 1022 aa34.27■■■■□ 3.08
PTPN18-213ENST00000489215 CDK19Q9BWU1 502 aa34.27■■■■□ 3.08
PTPN18-213ENST00000489215 SBNO1A3KN83 1393 aa34.26■■■■□ 3.08
PTPN18-213ENST00000489215 ITSN1Q15811 1721 aa34.26■■■■□ 3.07
PTPN18-213ENST00000489215 GPRASP1Q5JY77 1395 aa34.25■■■■□ 3.07
PTPN18-213ENST00000489215 NUDT16Q96DE0 195 aaKnown RBP34.25■■■■□ 3.07
PTPN18-213ENST00000489215 PRR36Q9H6K5 1346 aa34.25■■■■□ 3.07
PTPN18-213ENST00000489215 C8orf37Q96NL8 207 aa34.23■■■■□ 3.07
PTPN18-213ENST00000489215 ADAMTS2O95450 1211 aa34.22■■■■□ 3.07
PTPN18-213ENST00000489215 NGDNQ8NEJ9 315 aaKnown RBP34.22■■■■□ 3.07
PTPN18-213ENST00000489215 NGLY1Q96IV0 654 aa34.22■■■■□ 3.07
PTPN18-213ENST00000489215 AFF2P51816 1311 aa34.22■■■■□ 3.07
PTPN18-213ENST00000489215 TNS3Q68CZ2 1445 aa34.21■■■■□ 3.07
PTPN18-213ENST00000489215 CCDC61Q9Y6R9 512 aa34.21■■■■□ 3.07
PTPN18-213ENST00000489215 ARHGEF10O15013 1369 aa34.21■■■■□ 3.07
PTPN18-213ENST00000489215 NBPF8Q3BBV2 869 aa34.2■■■■□ 3.07
PTPN18-213ENST00000489215 PCGF6Q9BYE7 350 aa34.19■■■■□ 3.06
PTPN18-213ENST00000489215 ATP7BP35670 1465 aa34.19■■■■□ 3.06
PTPN18-213ENST00000489215 CLSPNQ9HAW4 1339 aa34.18■■■■□ 3.06
PTPN18-213ENST00000489215 QRICH2Q9H0J4 1663 aa34.18■■■■□ 3.06
PTPN18-213ENST00000489215 SRPK2P78362 688 aaKnown RBP34.16■■■■□ 3.06
PTPN18-213ENST00000489215 LMOD2Q6P5Q4 547 aa34.14■■■■□ 3.06
PTPN18-213ENST00000489215 EVC2Q86UK5 1308 aa34.13■■■■□ 3.05
PTPN18-213ENST00000489215 CARD11Q9BXL7 1154 aa34.13■■■■□ 3.05
PTPN18-213ENST00000489215 PLEKHG3A1L390 1219 aa34.12■■■■□ 3.05
PTPN18-213ENST00000489215 RXRBP28702 533 aa34.12■■■■□ 3.05
PTPN18-213ENST00000489215 HAP1P54257 671 aaPredicted RBP34.12■■■■□ 3.05
PTPN18-213ENST00000489215 MARF1Q9Y4F3 1742 aaKnown RBP34.12■■■■□ 3.05
PTPN18-213ENST00000489215 FNBP4Q8N3X1 1017 aaPredicted RBP34.11■■■■□ 3.05
PTPN18-213ENST00000489215 RALGAPBQ86X10 1494 aa34.1■■■■□ 3.05
PTPN18-213ENST00000489215 TIMELESSQ9UNS1 1208 aa34.1■■■■□ 3.05
PTPN18-213ENST00000489215 QTRT2Q9H974 415 aaKnown RBP34.09■■■■□ 3.05
PTPN18-213ENST00000489215 TRPM3Q9HCF6 1732 aaPredicted RBP34.08■■■■□ 3.05
PTPN18-213ENST00000489215 USP21Q9UK80 565 aa34.08■■■■□ 3.05
PTPN18-213ENST00000489215 TOPAZ1Q8N9V7 1692 aa34.08■■■■□ 3.05
PTPN18-213ENST00000489215 POLR3AO14802 1390 aaPredicted RBP34.08■■■■□ 3.05
PTPN18-213ENST00000489215 ACEP12821 1306 aa34.05■■■■□ 3.04
PTPN18-213ENST00000489215 PAK3O75914 559 aaPredicted RBP34.05■■■■□ 3.04
PTPN18-213ENST00000489215 CABP2Q9NPB3 220 aa34.05■■■■□ 3.04
PTPN18-213ENST00000489215 RBM6P78332 1123 aaKnown RBP34.04■■■■□ 3.04
PTPN18-213ENST00000489215 TRPC5Q9UL62 973 aaPredicted RBP34.03■■■■□ 3.04
PTPN18-213ENST00000489215 ALS2Q96Q42 1657 aa34.03■■■■□ 3.04
PTPN18-213ENST00000489215 SBNO2Q9Y2G9 1366 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms