RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 NEUROD1Q13562 356 aa33.83■■■■□ 3.01
STRADB-209ENST00000488196 CDC42BPGQ6DT37 1551 aa33.81■■■■□ 3
STRADB-209ENST00000488196 PRAM1Q96QH2 718 aa33.81■■■■□ 3
STRADB-209ENST00000488196 SAFB2Q14151 953 aaKnown RBP eCLIP33.8■■■■□ 3
STRADB-209ENST00000488196 TRAK1Q9UPV9 953 aa33.8■■■■□ 3
STRADB-209ENST00000488196 DDX17Q92841 729 aaKnown RBP33.79■■■■□ 3
STRADB-209ENST00000488196 ORAI2Q96SN7 254 aa33.79■■■■□ 3
STRADB-209ENST00000488196 L3MBTL2Q969R5 705 aa33.78■■■■□ 3
STRADB-209ENST00000488196 DLC1Q96QB1 1528 aa33.77■■■■□ 3
STRADB-209ENST00000488196 NUTM2FA1L443 756 aa33.76■■■□□ 2.99
STRADB-209ENST00000488196 POGKQ9P215 609 aa33.76■■■□□ 2.99
STRADB-209ENST00000488196 NHSL1Q5SYE7 1610 aa33.75■■■□□ 2.99
STRADB-209ENST00000488196 JCADQ9P266 1359 aa33.75■■■□□ 2.99
STRADB-209ENST00000488196 ILDR2Q71H61 639 aa33.71■■■□□ 2.99
STRADB-209ENST00000488196 ESCO1Q5FWF5 840 aa33.7■■■□□ 2.99
STRADB-209ENST00000488196 KIAA1210Q9ULL0 1709 aa33.7■■■□□ 2.98
STRADB-209ENST00000488196 NBPF1Q3BBV0 1214 aa33.69■■■□□ 2.98
STRADB-209ENST00000488196 FMN2Q9NZ56 1722 aa33.69■■■□□ 2.98
STRADB-209ENST00000488196 PHF23Q9BUL5 403 aaPredicted RBP33.68■■■□□ 2.98
STRADB-209ENST00000488196 MINK1Q8N4C8 1332 aaPredicted RBP33.64■■■□□ 2.98
STRADB-209ENST00000488196 HIRIP3Q9BW71 556 aaPredicted RBP33.64■■■□□ 2.98
STRADB-209ENST00000488196 ARHGEF28Q8N1W1 1705 aaKnown RBP33.64■■■□□ 2.98
STRADB-209ENST00000488196 SHPRHQ149N8 1683 aa33.63■■■□□ 2.97
STRADB-209ENST00000488196 LRRC59Q96AG4 307 aaKnown RBP33.62■■■□□ 2.97
STRADB-209ENST00000488196 RGPD8O14715 1765 aaPredicted RBP33.62■■■□□ 2.97
STRADB-209ENST00000488196 SOS2Q07890 1332 aaPredicted RBP33.58■■■□□ 2.97
STRADB-209ENST00000488196 SPATA31A6Q5VVP1 1343 aa33.58■■■□□ 2.97
STRADB-209ENST00000488196 FOXO3O43524 673 aa33.58■■■□□ 2.97
STRADB-209ENST00000488196 PCGF6Q9BYE7 350 aa33.58■■■□□ 2.97
STRADB-209ENST00000488196 ADGRB2O60241 1585 aa33.58■■■□□ 2.97
STRADB-209ENST00000488196 LRP6O75581 1613 aa33.56■■■□□ 2.96
STRADB-209ENST00000488196 XPCQ01831 940 aaPredicted RBP33.55■■■□□ 2.96
STRADB-209ENST00000488196 NPHP3Q7Z494 1330 aa33.54■■■□□ 2.96
STRADB-209ENST00000488196 RGS17Q9UGC6 210 aaPredicted RBP33.54■■■□□ 2.96
STRADB-209ENST00000488196 PNPLA6Q8IY17 1366 aa33.53■■■□□ 2.96
STRADB-209ENST00000488196 NUTM2BA6NNL0 878 aaPredicted RBP33.53■■■□□ 2.96
STRADB-209ENST00000488196 NUTM2EB1AL46 878 aaPredicted RBP33.53■■■□□ 2.96
STRADB-209ENST00000488196 NUTM2AQ8IVF1 878 aaPredicted RBP33.53■■■□□ 2.96
STRADB-209ENST00000488196 TRPM1Q7Z4N2 1603 aa33.51■■■□□ 2.96
STRADB-209ENST00000488196 USP32Q8NFA0 1604 aa33.51■■■□□ 2.96
STRADB-209ENST00000488196 WASLO00401 505 aaPredicted RBP33.51■■■□□ 2.95
STRADB-209ENST00000488196 NBPF8Q3BBV2 869 aa33.5■■■□□ 2.95
STRADB-209ENST00000488196 PHF8Q9UPP1 1060 aa33.5■■■□□ 2.95
STRADB-209ENST00000488196 PXDNQ92626 1479 aa33.5■■■□□ 2.95
STRADB-209ENST00000488196 TONSLQ96HA7 1378 aa33.49■■■□□ 2.95
STRADB-209ENST00000488196 KIF1AQ12756 1690 aa33.49■■■□□ 2.95
STRADB-209ENST00000488196 ANKARQ7Z5J8 1434 aa33.47■■■□□ 2.95
STRADB-209ENST00000488196 MEX3CQ5U5Q3 659 aaKnown RBP33.47■■■□□ 2.95
STRADB-209ENST00000488196 PRR36Q9H6K5 1346 aa33.47■■■□□ 2.95
STRADB-209ENST00000488196 PMFBP1Q8TBY8 1022 aa33.44■■■□□ 2.94
STRADB-209ENST00000488196 ROCK2O75116 1388 aaKnown RBP33.44■■■□□ 2.94
STRADB-209ENST00000488196 TULP4Q9NRJ4 1543 aa33.43■■■□□ 2.94
STRADB-209ENST00000488196 KRT28Q7Z3Y7 464 aa33.42■■■□□ 2.94
STRADB-209ENST00000488196 EIF3AQ14152 1382 aaKnown RBP33.42■■■□□ 2.94
STRADB-209ENST00000488196 CENPJQ9HC77 1338 aaPredicted RBP33.41■■■□□ 2.94
STRADB-209ENST00000488196 CDK19Q9BWU1 502 aa33.4■■■□□ 2.94
STRADB-209ENST00000488196 POTEAQ6S8J7 498 aa33.39■■■□□ 2.94
STRADB-209ENST00000488196 NUDT16Q96DE0 195 aaKnown RBP33.36■■■□□ 2.93
STRADB-209ENST00000488196 PSME1Q06323 249 aa33.35■■■□□ 2.93
STRADB-209ENST00000488196 QRICH2Q9H0J4 1663 aa33.35■■■□□ 2.93
STRADB-209ENST00000488196 COL22A1Q8NFW1 1626 aaPredicted RBP33.35■■■□□ 2.93
STRADB-209ENST00000488196 SPATA31A3Q5VYP0 1347 aa33.34■■■□□ 2.93
STRADB-209ENST00000488196 ATP7BP35670 1465 aa33.34■■■□□ 2.93
STRADB-209ENST00000488196 ADAMTS2O95450 1211 aa33.33■■■□□ 2.93
STRADB-209ENST00000488196 GPRASP1Q5JY77 1395 aa33.32■■■□□ 2.92
STRADB-209ENST00000488196 C8orf37Q96NL8 207 aa33.3■■■□□ 2.92
STRADB-209ENST00000488196 ITSN1Q15811 1721 aa33.29■■■□□ 2.92
STRADB-209ENST00000488196 SOCS7O14512 581 aa33.28■■■□□ 2.92
STRADB-209ENST00000488196 NGDNQ8NEJ9 315 aaKnown RBP33.28■■■□□ 2.92
STRADB-209ENST00000488196 TNS3Q68CZ2 1445 aa33.28■■■□□ 2.92
STRADB-209ENST00000488196 RALGAPBQ86X10 1494 aa33.27■■■□□ 2.92
STRADB-209ENST00000488196 SBNO1A3KN83 1393 aa33.27■■■□□ 2.92
STRADB-209ENST00000488196 CARD11Q9BXL7 1154 aa33.27■■■□□ 2.92
STRADB-209ENST00000488196 AFF2P51816 1311 aa33.27■■■□□ 2.92
STRADB-209ENST00000488196 SRPK2P78362 688 aaKnown RBP33.26■■■□□ 2.91
STRADB-209ENST00000488196 CABP2Q9NPB3 220 aa33.26■■■□□ 2.91
STRADB-209ENST00000488196 ZNF772Q68DY9 489 aaPredicted RBP33.25■■■□□ 2.91
STRADB-209ENST00000488196 LMOD2Q6P5Q4 547 aa33.25■■■□□ 2.91
STRADB-209ENST00000488196 CCDC61Q9Y6R9 512 aa33.24■■■□□ 2.91
STRADB-209ENST00000488196 TOPAZ1Q8N9V7 1692 aa33.23■■■□□ 2.91
STRADB-209ENST00000488196 TRPM3Q9HCF6 1732 aaPredicted RBP33.22■■■□□ 2.91
STRADB-209ENST00000488196 PLEKHG5O94827 1062 aa33.22■■■□□ 2.91
STRADB-209ENST00000488196 NGLY1Q96IV0 654 aa33.22■■■□□ 2.91
STRADB-209ENST00000488196 CLSPNQ9HAW4 1339 aa33.2■■■□□ 2.91
STRADB-209ENST00000488196 CABLES1Q8TDN4 633 aa33.19■■■□□ 2.9
STRADB-209ENST00000488196 EVC2Q86UK5 1308 aa33.18■■■□□ 2.9
STRADB-209ENST00000488196 PLEKHG3A1L390 1219 aa33.17■■■□□ 2.9
STRADB-209ENST00000488196 ACEP12821 1306 aa33.17■■■□□ 2.9
STRADB-209ENST00000488196 ARHGEF10O15013 1369 aa33.17■■■□□ 2.9
STRADB-209ENST00000488196 MARF1Q9Y4F3 1742 aaKnown RBP33.16■■■□□ 2.9
STRADB-209ENST00000488196 POLR3AO14802 1390 aaPredicted RBP33.15■■■□□ 2.9
STRADB-209ENST00000488196 PAK3O75914 559 aaPredicted RBP33.15■■■□□ 2.9
STRADB-209ENST00000488196 ALS2Q96Q42 1657 aa33.14■■■□□ 2.9
STRADB-209ENST00000488196 PPIP5K1Q6PFW1 1433 aa33.14■■■□□ 2.9
STRADB-209ENST00000488196 CCER1Q8TC90 406 aaPredicted RBP33.14■■■□□ 2.9
STRADB-209ENST00000488196 HAP1P54257 671 aaPredicted RBP33.12■■■□□ 2.89
STRADB-209ENST00000488196 FNBP4Q8N3X1 1017 aaPredicted RBP33.1■■■□□ 2.89
STRADB-209ENST00000488196 QTRT2Q9H974 415 aaKnown RBP33.1■■■□□ 2.89
STRADB-209ENST00000488196 CABP1Q9NZU7 370 aa33.1■■■□□ 2.89
STRADB-209ENST00000488196 USP21Q9UK80 565 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms