RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
R3HDM1-217ENST00000486532 TNFRSF10AO00220 468 aa8.77□□□□□ -1.01
R3HDM1-217ENST00000486532 MMP16P51512 607 aa8.77□□□□□ -1.01
R3HDM1-217ENST00000486532 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
R3HDM1-217ENST00000486532 MYT1Q01538 1121 aa8.76□□□□□ -1.01
R3HDM1-217ENST00000486532 FOXC1Q12948 553 aa8.76□□□□□ -1.01
R3HDM1-217ENST00000486532 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
R3HDM1-217ENST00000486532 HOXA2O43364 376 aa8.75□□□□□ -1.01
R3HDM1-217ENST00000486532 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
R3HDM1-217ENST00000486532 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
R3HDM1-217ENST00000486532 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-217ENST00000486532 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
R3HDM1-217ENST00000486532 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
R3HDM1-217ENST00000486532 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
R3HDM1-217ENST00000486532 DIXDC1Q155Q3 683 aa8.71□□□□□ -1.02
R3HDM1-217ENST00000486532 POTECB2RU33 542 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 WNT7AO00755 349 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 ZMYND10O75800 440 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 TTLL12Q14166 644 aaPredicted RBP8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 RETREG3Q86VR2 466 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
R3HDM1-217ENST00000486532 TTC24A2A3L6 582 aaPredicted RBP8.69□□□□□ -1.02
R3HDM1-217ENST00000486532 JUNDP17535 347 aa8.69□□□□□ -1.02
R3HDM1-217ENST00000486532 TRIM32Q13049 653 aa8.69□□□□□ -1.02
R3HDM1-217ENST00000486532 AMHR2Q16671 573 aa8.69□□□□□ -1.02
R3HDM1-217ENST00000486532 CRIPAKQ8N1N5 446 aa8.69□□□□□ -1.02
R3HDM1-217ENST00000486532 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
R3HDM1-217ENST00000486532 AVPP01185 164 aa8.67□□□□□ -1.02
R3HDM1-217ENST00000486532 FDX1P10109 184 aa8.67□□□□□ -1.02
R3HDM1-217ENST00000486532 WNT7BP56706 349 aa8.67□□□□□ -1.02
R3HDM1-217ENST00000486532 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-217ENST00000486532 SNIP1Q8TAD8 396 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-217ENST00000486532 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-217ENST00000486532 SPDYE5A6NIY4 337 aa8.66□□□□□ -1.02
R3HDM1-217ENST00000486532 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
R3HDM1-217ENST00000486532 AXIN1O15169 862 aa8.65□□□□□ -1.02
R3HDM1-217ENST00000486532 AAASQ9NRG9 546 aa8.65□□□□□ -1.02
R3HDM1-217ENST00000486532 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
R3HDM1-217ENST00000486532 HLA-CQ95604 372 aa8.64□□□□□ -1.03
R3HDM1-217ENST00000486532 GJA5P36382 358 aa8.63□□□□□ -1.03
R3HDM1-217ENST00000486532 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
R3HDM1-217ENST00000486532 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
R3HDM1-217ENST00000486532 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
R3HDM1-217ENST00000486532 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
R3HDM1-217ENST00000486532 MS4A1P11836 297 aa8.62□□□□□ -1.03
R3HDM1-217ENST00000486532 MRGPRX2Q96LB1 330 aa8.61□□□□□ -1.03
R3HDM1-217ENST00000486532 AK7Q96M32 723 aa8.61□□□□□ -1.03
R3HDM1-217ENST00000486532 ST8SIA5O15466 376 aa8.6□□□□□ -1.03
R3HDM1-217ENST00000486532 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
R3HDM1-217ENST00000486532 MTMR2Q13614 643 aa8.6□□□□□ -1.03
R3HDM1-217ENST00000486532 PTPRNQ16849 979 aa8.6□□□□□ -1.03
R3HDM1-217ENST00000486532 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
R3HDM1-217ENST00000486532 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
R3HDM1-217ENST00000486532 RC3H1Q5TC82 1133 aaKnown RBP8.59□□□□□ -1.03
R3HDM1-217ENST00000486532 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
R3HDM1-217ENST00000486532 STK17AQ9UEE5 414 aa8.59□□□□□ -1.03
R3HDM1-217ENST00000486532 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
R3HDM1-217ENST00000486532 MOXD2PA6NHM9 499 aa8.57□□□□□ -1.04
R3HDM1-217ENST00000486532 TRIM66O15016 1216 aa8.57□□□□□ -1.04
R3HDM1-217ENST00000486532 SMPD1P17405 629 aa8.57□□□□□ -1.04
R3HDM1-217ENST00000486532 WFS1O76024 890 aa8.56□□□□□ -1.04
R3HDM1-217ENST00000486532 EHBP1Q8NDI1 1231 aa8.56□□□□□ -1.04
R3HDM1-217ENST00000486532 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
R3HDM1-217ENST00000486532 SENP2Q9HC62 589 aa8.56□□□□□ -1.04
R3HDM1-217ENST00000486532 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
R3HDM1-217ENST00000486532 NDUFV2P19404 249 aa8.55□□□□□ -1.04
R3HDM1-217ENST00000486532 PARP9Q8IXQ6 854 aa8.55□□□□□ -1.04
R3HDM1-217ENST00000486532 EVA1BQ9NVM1 165 aa8.55□□□□□ -1.04
R3HDM1-217ENST00000486532 SKOR1P84550 965 aa8.54□□□□□ -1.04
R3HDM1-217ENST00000486532 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
R3HDM1-217ENST00000486532 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
R3HDM1-217ENST00000486532 ZBTB3Q9H5J0 574 aa8.54□□□□□ -1.04
R3HDM1-217ENST00000486532 J3QL48 77 aa8.53□□□□□ -1.04
R3HDM1-217ENST00000486532 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
R3HDM1-217ENST00000486532 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
R3HDM1-217ENST00000486532 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
R3HDM1-217ENST00000486532 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
R3HDM1-217ENST00000486532 UNC93B1Q9H1C4 597 aa8.53□□□□□ -1.04
R3HDM1-217ENST00000486532 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
R3HDM1-217ENST00000486532 SPTLC1O15269 473 aa8.52□□□□□ -1.05
R3HDM1-217ENST00000486532 WIPF1O43516 503 aa8.52□□□□□ -1.05
R3HDM1-217ENST00000486532 ALDH1A1P00352 501 aa8.52□□□□□ -1.05
R3HDM1-217ENST00000486532 WASF2Q9Y6W5 498 aa8.52□□□□□ -1.05
R3HDM1-217ENST00000486532 PTCRAQ6ISU1 281 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-217ENST00000486532 ATP13A2Q9NQ11 1180 aa8.51□□□□□ -1.05
R3HDM1-217ENST00000486532 GMPR2Q9P2T1 348 aaKnown RBP8.51□□□□□ -1.05
R3HDM1-217ENST00000486532 VARSP26640 1264 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-217ENST00000486532 RIC3Q7Z5B4 369 aa8.5□□□□□ -1.05
R3HDM1-217ENST00000486532 CTHP32929 405 aa8.49□□□□□ -1.05
R3HDM1-217ENST00000486532 SH3BP2P78314 561 aa8.49□□□□□ -1.05
R3HDM1-217ENST00000486532 PDE4DQ08499 809 aa8.49□□□□□ -1.05
R3HDM1-217ENST00000486532 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
R3HDM1-217ENST00000486532 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
R3HDM1-217ENST00000486532 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
R3HDM1-217ENST00000486532 SIAH2O43255 324 aa8.48□□□□□ -1.05
R3HDM1-217ENST00000486532 NFX1Q12986 1120 aaKnown RBP8.48□□□□□ -1.05
R3HDM1-217ENST00000486532 MPNDQ8N594 471 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms