RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 POGKQ9P215 609 aa22.27■■□□□ 1.16
APOE-205ENST00000485628 SLC24A1O60721 1099 aa22.26■■□□□ 1.15
APOE-205ENST00000485628 PROSER2Q86WR7 435 aaPredicted RBP22.26■■□□□ 1.15
APOE-205ENST00000485628 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
APOE-205ENST00000485628 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
APOE-205ENST00000485628 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
APOE-205ENST00000485628 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
APOE-205ENST00000485628 ADGRL3Q9HAR2 1447 aa22.25■■□□□ 1.15
APOE-205ENST00000485628 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
APOE-205ENST00000485628 PUS7Q96PZ0 661 aaKnown RBP22.24■■□□□ 1.15
APOE-205ENST00000485628 SAFB2Q14151 953 aaKnown RBP eCLIP22.22■■□□□ 1.15
APOE-205ENST00000485628 DISP3Q9P2K9 1392 aa22.22■■□□□ 1.15
APOE-205ENST00000485628 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
APOE-205ENST00000485628 MINK1Q8N4C8 1332 aaPredicted RBP22.21■■□□□ 1.15
APOE-205ENST00000485628 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
APOE-205ENST00000485628 WASLO00401 505 aaPredicted RBP22.19■■□□□ 1.14
APOE-205ENST00000485628 C19orf44Q9H6X5 657 aa22.19■■□□□ 1.14
APOE-205ENST00000485628 DCCP43146 1447 aa22.19■■□□□ 1.14
APOE-205ENST00000485628 EVC2Q86UK5 1308 aa22.18■■□□□ 1.14
APOE-205ENST00000485628 TMF1P82094 1093 aa22.18■■□□□ 1.14
APOE-205ENST00000485628 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
APOE-205ENST00000485628 CDK19Q9BWU1 502 aa22.16■■□□□ 1.14
APOE-205ENST00000485628 WASHC2AQ641Q2 1341 aa22.15■■□□□ 1.14
APOE-205ENST00000485628 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
APOE-205ENST00000485628 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
APOE-205ENST00000485628 USP32Q8NFA0 1604 aa22.14■■□□□ 1.14
APOE-205ENST00000485628 KIF7Q2M1P5 1343 aa22.14■■□□□ 1.14
APOE-205ENST00000485628 PRR36Q9H6K5 1346 aa22.12■■□□□ 1.13
APOE-205ENST00000485628 ATP7BP35670 1465 aa22.12■■□□□ 1.13
APOE-205ENST00000485628 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
APOE-205ENST00000485628 ANKARQ7Z5J8 1434 aa22.12■■□□□ 1.13
APOE-205ENST00000485628 CDCA8Q53HL2 280 aa22.11■■□□□ 1.13
APOE-205ENST00000485628 TOPAZ1Q8N9V7 1692 aa22.1■■□□□ 1.13
APOE-205ENST00000485628 MSH6P52701 1360 aa22.1■■□□□ 1.13
APOE-205ENST00000485628 CABP2Q9NPB3 220 aa22.09■■□□□ 1.13
APOE-205ENST00000485628 MYOM1P52179 1685 aa22.09■■□□□ 1.13
APOE-205ENST00000485628 MST1RQ04912 1400 aa22.08■■□□□ 1.13
APOE-205ENST00000485628 RGPD8O14715 1765 aaPredicted RBP22.08■■□□□ 1.13
APOE-205ENST00000485628 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.12
APOE-205ENST00000485628 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
APOE-205ENST00000485628 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
APOE-205ENST00000485628 C1orf167Q5SNV9 1468 aa22.05■■□□□ 1.12
APOE-205ENST00000485628 SRPK2P78362 688 aaKnown RBP22.05■■□□□ 1.12
APOE-205ENST00000485628 CCDC61Q9Y6R9 512 aa22.05■■□□□ 1.12
APOE-205ENST00000485628 NINLQ9Y2I6 1382 aa22.04■■□□□ 1.12
APOE-205ENST00000485628 PLEKHG3A1L390 1219 aa22.04■■□□□ 1.12
APOE-205ENST00000485628 C14orf37Q86TY3 774 aa22.04■■□□□ 1.12
APOE-205ENST00000485628 ATF3P18847 181 aa22.03■■□□□ 1.12
APOE-205ENST00000485628 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
APOE-205ENST00000485628 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
APOE-205ENST00000485628 ITSN1Q15811 1721 aa22.02■■□□□ 1.12
APOE-205ENST00000485628 SLC12A5Q9H2X9 1139 aa22■■□□□ 1.11
APOE-205ENST00000485628 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
APOE-205ENST00000485628 CPSF1Q10570 1443 aaKnown RBP21.99■■□□□ 1.11
APOE-205ENST00000485628 SLAIN2Q9P270 581 aa21.99■■□□□ 1.11
APOE-205ENST00000485628 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
APOE-205ENST00000485628 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
APOE-205ENST00000485628 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
APOE-205ENST00000485628 ORAI2Q96SN7 254 aa21.96■■□□□ 1.11
APOE-205ENST00000485628 AKAP12Q02952 1782 aa21.96■■□□□ 1.11
APOE-205ENST00000485628 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
APOE-205ENST00000485628 PER1O15534 1290 aaPredicted RBP21.94■■□□□ 1.1
APOE-205ENST00000485628 KIF1AQ12756 1690 aa21.94■■□□□ 1.1
APOE-205ENST00000485628 SSH2Q76I76 1423 aa21.93■■□□□ 1.1
APOE-205ENST00000485628 CARD14Q9BXL6 1004 aa21.93■■□□□ 1.1
APOE-205ENST00000485628 PHF8Q9UPP1 1060 aa21.93■■□□□ 1.1
APOE-205ENST00000485628 ACEP12821 1306 aa21.92■■□□□ 1.1
APOE-205ENST00000485628 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
APOE-205ENST00000485628 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
APOE-205ENST00000485628 A0A1W2PP64 1363 aa21.91■■□□□ 1.1
APOE-205ENST00000485628 PANK3Q9H999 370 aa21.91■■□□□ 1.1
APOE-205ENST00000485628 MON2Q7Z3U7 1717 aa21.91■■□□□ 1.1
APOE-205ENST00000485628 TMC1Q8TDI8 760 aa21.9■■□□□ 1.1
APOE-205ENST00000485628 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
APOE-205ENST00000485628 DDX10Q13206 875 aaKnown RBP21.89■■□□□ 1.09
APOE-205ENST00000485628 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
APOE-205ENST00000485628 NRKQ7Z2Y5 1582 aa21.88■■□□□ 1.09
APOE-205ENST00000485628 TOM1O60784 492 aa21.88■■□□□ 1.09
APOE-205ENST00000485628 PMFBP1Q8TBY8 1022 aa21.88■■□□□ 1.09
APOE-205ENST00000485628 TERF2IPQ9NYB0 399 aa21.88■■□□□ 1.09
APOE-205ENST00000485628 USP6P35125 1406 aa21.87■■□□□ 1.09
APOE-205ENST00000485628 NHSL1Q5SYE7 1610 aa21.87■■□□□ 1.09
APOE-205ENST00000485628 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
APOE-205ENST00000485628 ROBO1Q9Y6N7 1651 aa21.86■■□□□ 1.09
APOE-205ENST00000485628 TRPM3Q9HCF6 1732 aaPredicted RBP21.85■■□□□ 1.09
APOE-205ENST00000485628 PXDNQ92626 1479 aa21.84■■□□□ 1.09
APOE-205ENST00000485628 EDC4Q6P2E9 1401 aaKnown RBP21.84■■□□□ 1.09
APOE-205ENST00000485628 HDGFL2Q7Z4V5 671 aaPredicted RBP21.84■■□□□ 1.09
APOE-205ENST00000485628 AHDC1Q5TGY3 1603 aaPredicted RBP21.84■■□□□ 1.09
APOE-205ENST00000485628 FOXO3O43524 673 aa21.83■■□□□ 1.09
APOE-205ENST00000485628 NGDNQ8NEJ9 315 aaKnown RBP21.83■■□□□ 1.09
APOE-205ENST00000485628 KTN1Q86UP2 1357 aaKnown RBP21.83■■□□□ 1.08
APOE-205ENST00000485628 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
APOE-205ENST00000485628 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
APOE-205ENST00000485628 NPHP3Q7Z494 1330 aa21.81■■□□□ 1.08
APOE-205ENST00000485628 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
APOE-205ENST00000485628 AMER1Q5JTC6 1135 aaPredicted RBP21.81■■□□□ 1.08
APOE-205ENST00000485628 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
APOE-205ENST00000485628 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
APOE-205ENST00000485628 SBNO1A3KN83 1393 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms