RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 PRAM1Q96QH2 718 aa26.21■■□□□ 1.79
ERCC2-205ENST00000485403 TOM1O60784 492 aa26.2■■□□□ 1.79
ERCC2-205ENST00000485403 FBXO41Q8TF61 875 aa26.2■■□□□ 1.79
ERCC2-205ENST00000485403 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
ERCC2-205ENST00000485403 CADPS2Q86UW7 1296 aa26.17■■□□□ 1.78
ERCC2-205ENST00000485403 POGKQ9P215 609 aa26.16■■□□□ 1.78
ERCC2-205ENST00000485403 ADGRB2O60241 1585 aa26.16■■□□□ 1.78
ERCC2-205ENST00000485403 ATF3P18847 181 aa26.14■■□□□ 1.78
ERCC2-205ENST00000485403 CARD11Q9BXL7 1154 aa26.14■■□□□ 1.77
ERCC2-205ENST00000485403 SAFB2Q14151 953 aaKnown RBP eCLIP26.12■■□□□ 1.77
ERCC2-205ENST00000485403 MST1RQ04912 1400 aa26.11■■□□□ 1.77
ERCC2-205ENST00000485403 SLAIN2Q9P270 581 aa26.11■■□□□ 1.77
ERCC2-205ENST00000485403 QRICH2Q9H0J4 1663 aa26.1■■□□□ 1.77
ERCC2-205ENST00000485403 FMN2Q9NZ56 1722 aa26.1■■□□□ 1.77
ERCC2-205ENST00000485403 EIF3AQ14152 1382 aaKnown RBP26.1■■□□□ 1.77
ERCC2-205ENST00000485403 CENPJQ9HC77 1338 aaPredicted RBP26.09■■□□□ 1.77
ERCC2-205ENST00000485403 ROBO1Q9Y6N7 1651 aa26.06■■□□□ 1.76
ERCC2-205ENST00000485403 PIP4K2BP78356 416 aa26.06■■□□□ 1.76
ERCC2-205ENST00000485403 MINK1Q8N4C8 1332 aaPredicted RBP26.06■■□□□ 1.76
ERCC2-205ENST00000485403 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
ERCC2-205ENST00000485403 HIRIP3Q9BW71 556 aaPredicted RBP26.03■■□□□ 1.76
ERCC2-205ENST00000485403 SBNO2Q9Y2G9 1366 aa26.02■■□□□ 1.76
ERCC2-205ENST00000485403 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
ERCC2-205ENST00000485403 WASLO00401 505 aaPredicted RBP26■■□□□ 1.75
ERCC2-205ENST00000485403 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.754e-6■■■□□ 16
ERCC2-205ENST00000485403 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
ERCC2-205ENST00000485403 USP32Q8NFA0 1604 aa26■■□□□ 1.75
ERCC2-205ENST00000485403 RGPD8O14715 1765 aaPredicted RBP25.99■■□□□ 1.75
ERCC2-205ENST00000485403 USP47Q96K76 1375 aa25.99■■□□□ 1.75
ERCC2-205ENST00000485403 TULP4Q9NRJ4 1543 aa25.98■■□□□ 1.75
ERCC2-205ENST00000485403 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
ERCC2-205ENST00000485403 BRINP3Q76B58 766 aa25.98■■□□□ 1.75
ERCC2-205ENST00000485403 ZNF316A6NFI3 1004 aaPredicted RBP25.97■■□□□ 1.75
ERCC2-205ENST00000485403 HSPA5P11021 654 aaKnown RBP25.97■■□□□ 1.75
ERCC2-205ENST00000485403 NUTM2FA1L443 756 aa25.93■■□□□ 1.74
ERCC2-205ENST00000485403 ORAI2Q96SN7 254 aa25.93■■□□□ 1.74
ERCC2-205ENST00000485403 CDK19Q9BWU1 502 aa25.93■■□□□ 1.74
ERCC2-205ENST00000485403 NHSL1Q5SYE7 1610 aa25.93■■□□□ 1.74
ERCC2-205ENST00000485403 AHDC1Q5TGY3 1603 aaPredicted RBP25.93■■□□□ 1.74
ERCC2-205ENST00000485403 ATP7BP35670 1465 aa25.93■■□□□ 1.74
ERCC2-205ENST00000485403 ST20-MTHFSA0A0A6YYL1 179 aa25.93■■□□□ 1.74
ERCC2-205ENST00000485403 PRR36Q9H6K5 1346 aa25.92■■□□□ 1.74
ERCC2-205ENST00000485403 TESK2Q96S53 571 aa25.92■■□□□ 1.74
ERCC2-205ENST00000485403 KIF1AQ12756 1690 aa25.91■■□□□ 1.74
ERCC2-205ENST00000485403 ITSN1Q15811 1721 aa25.91■■□□□ 1.74
ERCC2-205ENST00000485403 TOPAZ1Q8N9V7 1692 aa25.9■■□□□ 1.74
ERCC2-205ENST00000485403 EVC2Q86UK5 1308 aa25.9■■□□□ 1.74
ERCC2-205ENST00000485403 ESCO1Q5FWF5 840 aa25.89■■□□□ 1.74
ERCC2-205ENST00000485403 PHLPP1O60346 1717 aa25.89■■□□□ 1.73
ERCC2-205ENST00000485403 HSPA1LP34931 641 aa25.88■■□□□ 1.73
ERCC2-205ENST00000485403 NUDT16Q96DE0 195 aaKnown RBP25.87■■□□□ 1.73
ERCC2-205ENST00000485403 COL16A1Q07092 1604 aaPredicted RBP25.87■■□□□ 1.73
ERCC2-205ENST00000485403 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
ERCC2-205ENST00000485403 SRPK2P78362 688 aaKnown RBP25.84■■□□□ 1.73
ERCC2-205ENST00000485403 CABP2Q9NPB3 220 aa25.84■■□□□ 1.73
ERCC2-205ENST00000485403 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
ERCC2-205ENST00000485403 CCDC61Q9Y6R9 512 aa25.83■■□□□ 1.72
ERCC2-205ENST00000485403 DDX17Q92841 729 aaKnown RBP25.81■■□□□ 1.72
ERCC2-205ENST00000485403 NPHP3Q7Z494 1330 aa25.81■■□□□ 1.72
ERCC2-205ENST00000485403 PXDNQ92626 1479 aa25.8■■□□□ 1.72
ERCC2-205ENST00000485403 SOS2Q07890 1332 aaPredicted RBP25.79■■□□□ 1.72
ERCC2-205ENST00000485403 FOXO3O43524 673 aa25.79■■□□□ 1.72
ERCC2-205ENST00000485403 PUS7Q96PZ0 661 aaKnown RBP25.79■■□□□ 1.72
ERCC2-205ENST00000485403 ATAD2Q6PL18 1390 aa25.78■■□□□ 1.72
ERCC2-205ENST00000485403 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
ERCC2-205ENST00000485403 PLEKHG3A1L390 1219 aa25.78■■□□□ 1.72
ERCC2-205ENST00000485403 PPIP5K1Q6PFW1 1433 aa25.77■■□□□ 1.72
ERCC2-205ENST00000485403 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
ERCC2-205ENST00000485403 POLR3AO14802 1390 aaPredicted RBP25.76■■□□□ 1.71
ERCC2-205ENST00000485403 TMF1P82094 1093 aa25.75■■□□□ 1.71
ERCC2-205ENST00000485403 SHPRHQ149N8 1683 aa25.72■■□□□ 1.71
ERCC2-205ENST00000485403 TRPM3Q9HCF6 1732 aaPredicted RBP25.71■■□□□ 1.71
ERCC2-205ENST00000485403 LRRC59Q96AG4 307 aaKnown RBP25.71■■□□□ 1.71
ERCC2-205ENST00000485403 CABP1Q9NZU7 370 aa25.71■■□□□ 1.71
ERCC2-205ENST00000485403 ACEP12821 1306 aa25.7■■□□□ 1.71
ERCC2-205ENST00000485403 XPCQ01831 940 aaPredicted RBP25.7■■□□□ 1.7
ERCC2-205ENST00000485403 KRT28Q7Z3Y7 464 aa25.7■■□□□ 1.7
ERCC2-205ENST00000485403 NGDNQ8NEJ9 315 aaKnown RBP25.7■■□□□ 1.7
ERCC2-205ENST00000485403 JCADQ9P266 1359 aa25.7■■□□□ 1.7
ERCC2-205ENST00000485403 AKAP12Q02952 1782 aa25.69■■□□□ 1.7
ERCC2-205ENST00000485403 C11orf95C9JLR9 678 aaPredicted RBP25.68■■□□□ 1.7
ERCC2-205ENST00000485403 PSME1Q06323 249 aa25.68■■□□□ 1.7
ERCC2-205ENST00000485403 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
ERCC2-205ENST00000485403 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
ERCC2-205ENST00000485403 NINLQ9Y2I6 1382 aa25.67■■□□□ 1.7
ERCC2-205ENST00000485403 CPSF1Q10570 1443 aaKnown RBP25.65■■□□□ 1.7
ERCC2-205ENST00000485403 CD163L1Q9NR16 1453 aa25.65■■□□□ 1.7
ERCC2-205ENST00000485403 SPATA31A3Q5VYP0 1347 aa25.65■■□□□ 1.7
ERCC2-205ENST00000485403 ALS2Q96Q42 1657 aa25.65■■□□□ 1.7
ERCC2-205ENST00000485403 PNPLA6Q8IY17 1366 aa25.65■■□□□ 1.7
ERCC2-205ENST00000485403 TNS3Q68CZ2 1445 aa25.64■■□□□ 1.7
ERCC2-205ENST00000485403 COL22A1Q8NFW1 1626 aaPredicted RBP25.64■■□□□ 1.7
ERCC2-205ENST00000485403 WASHC2AQ641Q2 1341 aa25.64■■□□□ 1.7
ERCC2-205ENST00000485403 CCDC7Q96M83 1385 aa25.64■■□□□ 1.69
ERCC2-205ENST00000485403 KIF7Q2M1P5 1343 aa25.63■■□□□ 1.69
ERCC2-205ENST00000485403 USP6P35125 1406 aa25.63■■□□□ 1.69
ERCC2-205ENST00000485403 MYOM1P52179 1685 aa25.63■■□□□ 1.69
ERCC2-205ENST00000485403 MON2Q7Z3U7 1717 aa25.63■■□□□ 1.69
ERCC2-205ENST00000485403 BRD4O60885 1362 aaPredicted RBP25.62■■□□□ 1.69
ERCC2-205ENST00000485403 SLC12A5Q9H2X9 1139 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms