RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 TATDN2Q93075 761 aa14.39□□□□□ -0.11
TTC3-218ENST00000484047 GCGRP47871 477 aa14.37□□□□□ -0.11
TTC3-218ENST00000484047 USP46P62068 366 aa14.37□□□□□ -0.11
TTC3-218ENST00000484047 CFAP99D6REC4 459 aa14.37□□□□□ -0.11
TTC3-218ENST00000484047 HELBQ8NG08 1087 aaPredicted RBP14.37□□□□□ -0.11
TTC3-218ENST00000484047 MTMR2Q13614 643 aa14.36□□□□□ -0.11
TTC3-218ENST00000484047 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
TTC3-218ENST00000484047 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
TTC3-218ENST00000484047 SMAPO00193 183 aa14.35□□□□□ -0.11
TTC3-218ENST00000484047 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
TTC3-218ENST00000484047 SOX11P35716 441 aa14.34□□□□□ -0.11
TTC3-218ENST00000484047 SEMA3FQ13275 785 aa14.33□□□□□ -0.11
TTC3-218ENST00000484047 ARSIQ5FYB1 569 aa14.33□□□□□ -0.12
TTC3-218ENST00000484047 ATP9BO43861 1147 aa14.31□□□□□ -0.12
TTC3-218ENST00000484047 ZMIZ1Q9ULJ6 1067 aa14.31□□□□□ -0.12
TTC3-218ENST00000484047 C7P10643 843 aa14.3□□□□□ -0.12
TTC3-218ENST00000484047 NR6A1Q15406 480 aa14.3□□□□□ -0.12
TTC3-218ENST00000484047 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
TTC3-218ENST00000484047 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.3□□□□□ -0.12
TTC3-218ENST00000484047 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 PPP1R3GB7ZBB8 358 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 TMEM164Q5U3C3 297 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 RBM47A0AV96 593 aaKnown RBP14.29□□□□□ -0.12
TTC3-218ENST00000484047 SLC10A3P09131 477 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 PHLDB3Q6NSJ2 640 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 STK32AQ8WU08 396 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 BCL2L12Q9HB09 334 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
TTC3-218ENST00000484047 USP35Q9P2H5 1018 aa14.28□□□□□ -0.12
TTC3-218ENST00000484047 IGSF5Q9NSI5 407 aa14.27□□□□□ -0.12
TTC3-218ENST00000484047 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.13
TTC3-218ENST00000484047 PACS2Q86VP3 889 aa14.26□□□□□ -0.13
TTC3-218ENST00000484047 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
TTC3-218ENST00000484047 DCBLD2Q96PD2 775 aa14.25□□□□□ -0.13
TTC3-218ENST00000484047 C6orf229H3BNL8 230 aa14.25□□□□□ -0.13
TTC3-218ENST00000484047 ELOAQ14241 798 aaKnown RBP14.25□□□□□ -0.13
TTC3-218ENST00000484047 SLF2Q8IX21 1173 aa14.25□□□□□ -0.13
TTC3-218ENST00000484047 PIK3CDO00329 1044 aa14.23□□□□□ -0.13
TTC3-218ENST00000484047 PER1O15534 1290 aaPredicted RBP14.23□□□□□ -0.13
TTC3-218ENST00000484047 LHX6Q9UPM6 363 aa14.23□□□□□ -0.13
TTC3-218ENST00000484047 GABBR2O75899 941 aa14.23□□□□□ -0.13
TTC3-218ENST00000484047 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
TTC3-218ENST00000484047 SYMPKQ92797 1274 aaKnown RBP14.22□□□□□ -0.13
TTC3-218ENST00000484047 PTPREP23469 700 aa14.21□□□□□ -0.13
TTC3-218ENST00000484047 PROX2Q3B8N5 592 aa14.21□□□□□ -0.13
TTC3-218ENST00000484047 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
TTC3-218ENST00000484047 GPR153Q6NV75 609 aa14.21□□□□□ -0.13
TTC3-218ENST00000484047 DNAJC14Q6Y2X3 702 aaPredicted RBP14.21□□□□□ -0.13
TTC3-218ENST00000484047 KIAA1522Q9P206 1035 aaPredicted RBP14.21□□□□□ -0.13
TTC3-218ENST00000484047 EIF4G2P78344 907 aaKnown RBP eCLIP14.21□□□□□ -0.14
TTC3-218ENST00000484047 RSPH4AQ5TD94 716 aa14.21□□□□□ -0.14
TTC3-218ENST00000484047 NOVA2Q9UNW9 492 aaKnown RBP14.19□□□□□ -0.14
TTC3-218ENST00000484047 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
TTC3-218ENST00000484047 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
TTC3-218ENST00000484047 SLAIN2Q9P270 581 aa14.19□□□□□ -0.14
TTC3-218ENST00000484047 FUT2Q10981 343 aa14.17□□□□□ -0.14
TTC3-218ENST00000484047 SWT1Q5T5J6 900 aaKnown RBP14.16□□□□□ -0.14
TTC3-218ENST00000484047 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
TTC3-218ENST00000484047 MRRFQ96E11 262 aaKnown RBP14.15□□□□□ -0.14
TTC3-218ENST00000484047 USP17L3A6NCW0 530 aa14.15□□□□□ -0.14
TTC3-218ENST00000484047 USP17L4A6NCW7 530 aa14.15□□□□□ -0.14
TTC3-218ENST00000484047 SSFA2P28290 1259 aa14.15□□□□□ -0.14
TTC3-218ENST00000484047 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
TTC3-218ENST00000484047 USP17L1Q7RTZ2 530 aa14.15□□□□□ -0.14
TTC3-218ENST00000484047 FBXO45P0C2W1 286 aa14.14□□□□□ -0.15
TTC3-218ENST00000484047 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
TTC3-218ENST00000484047 NR1H3Q13133 447 aa14.13□□□□□ -0.15
TTC3-218ENST00000484047 CRTC2Q53ET0 693 aaPredicted RBP14.11□□□□□ -0.15
TTC3-218ENST00000484047 DEPDC4Q8N2C3 294 aa14.11□□□□□ -0.15
TTC3-218ENST00000484047 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
TTC3-218ENST00000484047 NFATC2IPQ8NCF5 419 aa14.1□□□□□ -0.15
TTC3-218ENST00000484047 ZSWIM6Q9HCJ5 1215 aa14.1□□□□□ -0.15
TTC3-218ENST00000484047 USP17L5A8MUK1 530 aa14.09□□□□□ -0.15
TTC3-218ENST00000484047 ZNF16P17020 682 aaPredicted RBP14.09□□□□□ -0.15
TTC3-218ENST00000484047 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
TTC3-218ENST00000484047 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
TTC3-218ENST00000484047 SKIP12755 728 aa14.09□□□□□ -0.15
TTC3-218ENST00000484047 FAM174AQ8TBP5 190 aa14.09□□□□□ -0.15
TTC3-218ENST00000484047 SOWAHDA6NJG2 315 aa14.08□□□□□ -0.16
TTC3-218ENST00000484047 FAM196BA6NMK8 535 aa14.08□□□□□ -0.16
TTC3-218ENST00000484047 ERCC3P19447 782 aa14.08□□□□□ -0.16
TTC3-218ENST00000484047 SERPINB4P48594 390 aa14.08□□□□□ -0.16
TTC3-218ENST00000484047 USP17L15C9J2P7 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L13C9JLJ4 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L12C9JPN9 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L11C9JVI0 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L21D6R901 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L18D6R9N7 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L22D6RA61 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L17D6RBQ6 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L19D6RCP7 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L20D6RJB6 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 USP17L24Q0WX57 530 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 GRIPAP1Q4V328 841 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
TTC3-218ENST00000484047 PLEKHM2Q8IWE5 1019 aa14.07□□□□□ -0.16
TTC3-218ENST00000484047 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
TTC3-218ENST00000484047 ZBBXA8MT70 800 aa14.05□□□□□ -0.16
TTC3-218ENST00000484047 SCNN1AP37088 669 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms