RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
SORT1-204ENST00000482236 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
SORT1-204ENST00000482236 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
SORT1-204ENST00000482236 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
SORT1-204ENST00000482236 PRAG1Q86YV5 1406 aa16.27■□□□□ 0.19
SORT1-204ENST00000482236 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
SORT1-204ENST00000482236 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
SORT1-204ENST00000482236 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
SORT1-204ENST00000482236 TECPR2O15040 1411 aa16.26■□□□□ 0.19
SORT1-204ENST00000482236 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
SORT1-204ENST00000482236 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
SORT1-204ENST00000482236 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
SORT1-204ENST00000482236 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
SORT1-204ENST00000482236 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
SORT1-204ENST00000482236 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
SORT1-204ENST00000482236 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
SORT1-204ENST00000482236 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
SORT1-204ENST00000482236 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
SORT1-204ENST00000482236 ZNF772Q68DY9 489 aaPredicted RBP16.22■□□□□ 0.19
SORT1-204ENST00000482236 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
SORT1-204ENST00000482236 XPCQ01831 940 aaPredicted RBP16.21■□□□□ 0.19
SORT1-204ENST00000482236 C8orf37Q96NL8 207 aa16.21■□□□□ 0.19
SORT1-204ENST00000482236 LRP6O75581 1613 aa16.2■□□□□ 0.18
SORT1-204ENST00000482236 ADAMTS2O95450 1211 aa16.2■□□□□ 0.18
SORT1-204ENST00000482236 FOXO3O43524 673 aa16.19■□□□□ 0.18
SORT1-204ENST00000482236 HIRIP3Q9BW71 556 aaPredicted RBP16.19■□□□□ 0.18
SORT1-204ENST00000482236 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
SORT1-204ENST00000482236 EIF3AQ14152 1382 aaKnown RBP16.18■□□□□ 0.18
SORT1-204ENST00000482236 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
SORT1-204ENST00000482236 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
SORT1-204ENST00000482236 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
SORT1-204ENST00000482236 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
SORT1-204ENST00000482236 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
SORT1-204ENST00000482236 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
SORT1-204ENST00000482236 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
SORT1-204ENST00000482236 NGLY1Q96IV0 654 aa16.16■□□□□ 0.18
SORT1-204ENST00000482236 AFF2P51816 1311 aa16.16■□□□□ 0.18
SORT1-204ENST00000482236 DLC1Q96QB1 1528 aa16.15■□□□□ 0.18
SORT1-204ENST00000482236 FMN2Q9NZ56 1722 aa16.15■□□□□ 0.18
SORT1-204ENST00000482236 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
SORT1-204ENST00000482236 KIF1AQ12756 1690 aa16.14■□□□□ 0.18
SORT1-204ENST00000482236 PSME1Q06323 249 aa16.14■□□□□ 0.17
SORT1-204ENST00000482236 PHF8Q9UPP1 1060 aa16.14■□□□□ 0.17
SORT1-204ENST00000482236 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
SORT1-204ENST00000482236 RXRBP28702 533 aa16.12■□□□□ 0.17
SORT1-204ENST00000482236 KRT28Q7Z3Y7 464 aa16.12■□□□□ 0.17
SORT1-204ENST00000482236 PMFBP1Q8TBY8 1022 aa16.11■□□□□ 0.17
SORT1-204ENST00000482236 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
SORT1-204ENST00000482236 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
SORT1-204ENST00000482236 ANKARQ7Z5J8 1434 aa16.1■□□□□ 0.17
SORT1-204ENST00000482236 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SORT1-204ENST00000482236 PXDNQ92626 1479 aa16.09■□□□□ 0.17
SORT1-204ENST00000482236 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
SORT1-204ENST00000482236 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
SORT1-204ENST00000482236 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
SORT1-204ENST00000482236 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
SORT1-204ENST00000482236 USP21Q9UK80 565 aa16.07■□□□□ 0.16
SORT1-204ENST00000482236 TNS3Q68CZ2 1445 aa16.06■□□□□ 0.16
SORT1-204ENST00000482236 TONSLQ96HA7 1378 aa16.06■□□□□ 0.16
SORT1-204ENST00000482236 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
SORT1-204ENST00000482236 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
SORT1-204ENST00000482236 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
SORT1-204ENST00000482236 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
SORT1-204ENST00000482236 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
SORT1-204ENST00000482236 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
SORT1-204ENST00000482236 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
SORT1-204ENST00000482236 ROCK2O75116 1388 aaKnown RBP16.04■□□□□ 0.16
SORT1-204ENST00000482236 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
SORT1-204ENST00000482236 KIAA1210Q9ULL0 1709 aa16.03■□□□□ 0.16
SORT1-204ENST00000482236 RBM6P78332 1123 aaKnown RBP16.03■□□□□ 0.16
SORT1-204ENST00000482236 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
SORT1-204ENST00000482236 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
SORT1-204ENST00000482236 COL22A1Q8NFW1 1626 aaPredicted RBP16.03■□□□□ 0.16
SORT1-204ENST00000482236 CDK19Q9BWU1 502 aa16.02■□□□□ 0.16
SORT1-204ENST00000482236 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
SORT1-204ENST00000482236 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
SORT1-204ENST00000482236 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
SORT1-204ENST00000482236 SBNO1A3KN83 1393 aa16■□□□□ 0.15
SORT1-204ENST00000482236 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
SORT1-204ENST00000482236 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
SORT1-204ENST00000482236 PRR36Q9H6K5 1346 aa15.99■□□□□ 0.15
SORT1-204ENST00000482236 USP32Q8NFA0 1604 aa15.98■□□□□ 0.15
SORT1-204ENST00000482236 A0A0G2JS52 829 aa15.98■□□□□ 0.15
SORT1-204ENST00000482236 MYT1Q01538 1121 aa15.98■□□□□ 0.15
SORT1-204ENST00000482236 ATP7BP35670 1465 aa15.97■□□□□ 0.15
SORT1-204ENST00000482236 CDK12Q9NYV4 1490 aaPredicted RBP15.96■□□□□ 0.14
SORT1-204ENST00000482236 RGS12O14924 1447 aa15.95■□□□□ 0.14
SORT1-204ENST00000482236 FNBP4Q8N3X1 1017 aaPredicted RBP15.95■□□□□ 0.14
SORT1-204ENST00000482236 CABP2Q9NPB3 220 aa15.95■□□□□ 0.14
SORT1-204ENST00000482236 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
SORT1-204ENST00000482236 QRICH2Q9H0J4 1663 aa15.95■□□□□ 0.14
SORT1-204ENST00000482236 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
SORT1-204ENST00000482236 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
SORT1-204ENST00000482236 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
SORT1-204ENST00000482236 NUTM2GQ5VZR2 741 aa15.93■□□□□ 0.14
SORT1-204ENST00000482236 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
SORT1-204ENST00000482236 TRPM1Q7Z4N2 1603 aa15.93■□□□□ 0.14
SORT1-204ENST00000482236 ACEP12821 1306 aa15.93■□□□□ 0.14
SORT1-204ENST00000482236 MARF1Q9Y4F3 1742 aaKnown RBP15.92■□□□□ 0.14
SORT1-204ENST00000482236 PRDM11Q9NQV5 511 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms