RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 WDR7Q9Y4E6 1490 aa14.15□□□□□ -0.14
SMPD4-218ENST00000482171 VSIG10Q8N0Z9 540 aa14.15□□□□□ -0.14
SMPD4-218ENST00000482171 EXOSC9Q06265 439 aaKnown RBP14.15□□□□□ -0.14
SMPD4-218ENST00000482171 FAM135AQ9P2D6 1515 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 PZPP20742 1482 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 RTEL1-TNFRSF6BF6WH68 1400 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 FAM161AQ3B820 660 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 THEMISQ8N1K5 641 aaPredicted RBP14.14□□□□□ -0.15
SMPD4-218ENST00000482171 ABTB2Q8N961 1025 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 TEFQ10587 303 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
SMPD4-218ENST00000482171 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
SMPD4-218ENST00000482171 NGEFQ8N5V2 710 aa14.13□□□□□ -0.15
SMPD4-218ENST00000482171 MSNP26038 577 aaKnown RBP14.12□□□□□ -0.15
SMPD4-218ENST00000482171 HSP90AA2PQ14568 343 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-218ENST00000482171 CCDC9Q9Y3X0 531 aaKnown RBP14.12□□□□□ -0.15
SMPD4-218ENST00000482171 FBLN1P23142 703 aa14.12□□□□□ -0.15
SMPD4-218ENST00000482171 SULT6B1Q6IMI4 303 aa14.11□□□□□ -0.15
SMPD4-218ENST00000482171 NUDT16Q96DE0 195 aaKnown RBP14.11□□□□□ -0.15
SMPD4-218ENST00000482171 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
SMPD4-218ENST00000482171 ABCC2Q92887 1545 aa14.11□□□□□ -0.15
SMPD4-218ENST00000482171 DNMT1P26358 1616 aaKnown RBP14.11□□□□□ -0.15
SMPD4-218ENST00000482171 NPHP1O15259 732 aa14.11□□□□□ -0.15
SMPD4-218ENST00000482171 DUOX2Q9NRD8 1548 aa14.11□□□□□ -0.15
SMPD4-218ENST00000482171 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
SMPD4-218ENST00000482171 GNAI1P63096 354 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 C1orf141Q5JVX7 400 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 CHMP3Q9Y3E7 222 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 CCDC61Q9Y6R9 512 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 A2MP01023 1474 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 TRIM6-TRIM34B2RNG4 842 aa14.1□□□□□ -0.15
SMPD4-218ENST00000482171 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
SMPD4-218ENST00000482171 PROSER2Q86WR7 435 aaPredicted RBP14.09□□□□□ -0.15
SMPD4-218ENST00000482171 TESK2Q96S53 571 aa14.09□□□□□ -0.15
SMPD4-218ENST00000482171 THUMPD2Q9BTF0 503 aaKnown RBP14.09□□□□□ -0.15
SMPD4-218ENST00000482171 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
SMPD4-218ENST00000482171 SCAF11Q99590 1463 aaKnown RBP14.09□□□□□ -0.15
SMPD4-218ENST00000482171 HMMRO75330 724 aa14.08□□□□□ -0.15
SMPD4-218ENST00000482171 PLCB2Q00722 1185 aa14.08□□□□□ -0.15
SMPD4-218ENST00000482171 NME9Q86XW9 330 aa14.08□□□□□ -0.16
SMPD4-218ENST00000482171 ATAD2Q6PL18 1390 aa14.08□□□□□ -0.16
SMPD4-218ENST00000482171 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
SMPD4-218ENST00000482171 FGD1P98174 961 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
SMPD4-218ENST00000482171 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 LNPKQ9C0E8 428 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 NAP1L2Q9ULW6 460 aaPredicted RBP14.07□□□□□ -0.16
SMPD4-218ENST00000482171 ATF3P18847 181 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 RALGAPBQ86X10 1494 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 NLRP2Q9NX02 1062 aa14.07□□□□□ -0.16
SMPD4-218ENST00000482171 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
SMPD4-218ENST00000482171 C20orf194Q5TEA3 1177 aa14.06□□□□□ -0.16
SMPD4-218ENST00000482171 ZNF518AQ6AHZ1 1483 aa14.05□□□□□ -0.16
SMPD4-218ENST00000482171 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
SMPD4-218ENST00000482171 CFAP65Q6ZU64 1925 aaKnown RBP14.05□□□□□ -0.16
SMPD4-218ENST00000482171 NOL8Q76FK4 1167 aaKnown RBP14.04□□□□□ -0.16
SMPD4-218ENST00000482171 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-218ENST00000482171 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 ANKLE2Q86XL3 938 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 BACH2Q9BYV9 841 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 KDM6BO15054 1643 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 SHANK2Q9UPX8 1470 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
SMPD4-218ENST00000482171 API5Q9BZZ5 524 aaKnown RBP14.04□□□□□ -0.16
SMPD4-218ENST00000482171 EVA1CP58658 441 aa14.03□□□□□ -0.16
SMPD4-218ENST00000482171 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
SMPD4-218ENST00000482171 AMER1Q5JTC6 1135 aaPredicted RBP14.03□□□□□ -0.16
SMPD4-218ENST00000482171 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
SMPD4-218ENST00000482171 DCTN1Q14203 1278 aa14.03□□□□□ -0.16
SMPD4-218ENST00000482171 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
SMPD4-218ENST00000482171 TWISTNBQ3B726 338 aaPredicted RBP14.02□□□□□ -0.16
SMPD4-218ENST00000482171 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.16
SMPD4-218ENST00000482171 NOB1Q9ULX3 412 aaKnown RBP14.02□□□□□ -0.17
SMPD4-218ENST00000482171 KIAA1211Q6ZU35 1233 aa14.01□□□□□ -0.17
SMPD4-218ENST00000482171 WASLO00401 505 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-218ENST00000482171 MCCP23508 829 aa14.01□□□□□ -0.17
SMPD4-218ENST00000482171 RILPL2Q969X0 211 aa14.01□□□□□ -0.17
SMPD4-218ENST00000482171 CHMP4AQ9BY43 222 aa14.01□□□□□ -0.17
SMPD4-218ENST00000482171 ADGRL2O95490 1459 aa14.01□□□□□ -0.17
SMPD4-218ENST00000482171 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
SMPD4-218ENST00000482171 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
SMPD4-218ENST00000482171 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
SMPD4-218ENST00000482171 TEX14Q8IWB6 1497 aa14□□□□□ -0.17
SMPD4-218ENST00000482171 ABCC10Q5T3U5 1492 aa14□□□□□ -0.17
SMPD4-218ENST00000482171 AIMP1Q12904 312 aaKnown RBP13.99□□□□□ -0.17
SMPD4-218ENST00000482171 MIS18AQ9NYP9 233 aa13.99□□□□□ -0.17
SMPD4-218ENST00000482171 WDR63Q8IWG1 891 aa13.99□□□□□ -0.17
SMPD4-218ENST00000482171 TTC5Q8N0Z6 440 aa13.98□□□□□ -0.17
SMPD4-218ENST00000482171 C9orf78Q9NZ63 289 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-218ENST00000482171 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-218ENST00000482171 CARD14Q9BXL6 1004 aa13.98□□□□□ -0.17
SMPD4-218ENST00000482171 MBD5Q9P267 1494 aa13.98□□□□□ -0.17
SMPD4-218ENST00000482171 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
SMPD4-218ENST00000482171 PER1O15534 1290 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-218ENST00000482171 FCHSD2O94868 740 aa13.97□□□□□ -0.17
SMPD4-218ENST00000482171 ZC3H6P61129 1189 aaKnown RBP13.97□□□□□ -0.17
SMPD4-218ENST00000482171 PDZRN3Q9UPQ7 1066 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms