RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
KDM4A-204ENST00000481296 PRAM1Q96QH2 718 aa13.5□□□□□ -0.25
KDM4A-204ENST00000481296 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
KDM4A-204ENST00000481296 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
KDM4A-204ENST00000481296 USP32Q8NFA0 1604 aa13.49□□□□□ -0.25
KDM4A-204ENST00000481296 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
KDM4A-204ENST00000481296 POGKQ9P215 609 aa13.48□□□□□ -0.25
KDM4A-204ENST00000481296 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
KDM4A-204ENST00000481296 SIRT1Q96EB6 747 aa13.47□□□□□ -0.25
KDM4A-204ENST00000481296 WAPLQ7Z5K2 1190 aa13.46□□□□□ -0.25
KDM4A-204ENST00000481296 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
KDM4A-204ENST00000481296 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
KDM4A-204ENST00000481296 NCOA3Q9Y6Q9 1424 aa13.45□□□□□ -0.26
KDM4A-204ENST00000481296 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
KDM4A-204ENST00000481296 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
KDM4A-204ENST00000481296 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
KDM4A-204ENST00000481296 TESK2Q96S53 571 aa13.44□□□□□ -0.26
KDM4A-204ENST00000481296 DCCP43146 1447 aa13.44□□□□□ -0.26
KDM4A-204ENST00000481296 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
KDM4A-204ENST00000481296 PROSER2Q86WR7 435 aaPredicted RBP13.43□□□□□ -0.26
KDM4A-204ENST00000481296 ATP7BP35670 1465 aa13.42□□□□□ -0.26
KDM4A-204ENST00000481296 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
KDM4A-204ENST00000481296 TMF1P82094 1093 aa13.41□□□□□ -0.26
KDM4A-204ENST00000481296 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
KDM4A-204ENST00000481296 RBM33Q96EV2 1170 aaKnown RBP13.41□□□□□ -0.26
KDM4A-204ENST00000481296 MSH6P52701 1360 aa13.41□□□□□ -0.26
KDM4A-204ENST00000481296 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
KDM4A-204ENST00000481296 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
KDM4A-204ENST00000481296 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
KDM4A-204ENST00000481296 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
KDM4A-204ENST00000481296 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
KDM4A-204ENST00000481296 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
KDM4A-204ENST00000481296 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
KDM4A-204ENST00000481296 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
KDM4A-204ENST00000481296 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
KDM4A-204ENST00000481296 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
KDM4A-204ENST00000481296 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
KDM4A-204ENST00000481296 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
KDM4A-204ENST00000481296 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
KDM4A-204ENST00000481296 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
KDM4A-204ENST00000481296 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
KDM4A-204ENST00000481296 MST1RQ04912 1400 aa13.36□□□□□ -0.27
KDM4A-204ENST00000481296 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
KDM4A-204ENST00000481296 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
KDM4A-204ENST00000481296 CDK19Q9BWU1 502 aa13.35□□□□□ -0.27
KDM4A-204ENST00000481296 ANKRD26Q9UPS8 1709 aa13.35□□□□□ -0.27
KDM4A-204ENST00000481296 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
KDM4A-204ENST00000481296 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
KDM4A-204ENST00000481296 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
KDM4A-204ENST00000481296 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
KDM4A-204ENST00000481296 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
KDM4A-204ENST00000481296 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
KDM4A-204ENST00000481296 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
KDM4A-204ENST00000481296 ATF3P18847 181 aa13.32□□□□□ -0.28
KDM4A-204ENST00000481296 CADPS2Q86UW7 1296 aa13.32□□□□□ -0.28
KDM4A-204ENST00000481296 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
KDM4A-204ENST00000481296 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
KDM4A-204ENST00000481296 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
KDM4A-204ENST00000481296 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
KDM4A-204ENST00000481296 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
KDM4A-204ENST00000481296 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
KDM4A-204ENST00000481296 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
KDM4A-204ENST00000481296 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
KDM4A-204ENST00000481296 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
KDM4A-204ENST00000481296 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
KDM4A-204ENST00000481296 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
KDM4A-204ENST00000481296 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.28
KDM4A-204ENST00000481296 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
KDM4A-204ENST00000481296 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
KDM4A-204ENST00000481296 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
KDM4A-204ENST00000481296 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
KDM4A-204ENST00000481296 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
KDM4A-204ENST00000481296 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
KDM4A-204ENST00000481296 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
KDM4A-204ENST00000481296 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
KDM4A-204ENST00000481296 USP6P35125 1406 aa13.24□□□□□ -0.29
KDM4A-204ENST00000481296 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
KDM4A-204ENST00000481296 ESCO1Q5FWF5 840 aa13.24□□□□□ -0.29
KDM4A-204ENST00000481296 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
KDM4A-204ENST00000481296 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
KDM4A-204ENST00000481296 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
KDM4A-204ENST00000481296 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
KDM4A-204ENST00000481296 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
KDM4A-204ENST00000481296 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
KDM4A-204ENST00000481296 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
KDM4A-204ENST00000481296 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
KDM4A-204ENST00000481296 PHRF1Q9P1Y6 1649 aaKnown RBP13.23□□□□□ -0.29
KDM4A-204ENST00000481296 PXDNQ92626 1479 aa13.23□□□□□ -0.29
KDM4A-204ENST00000481296 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
KDM4A-204ENST00000481296 ACEP12821 1306 aa13.22□□□□□ -0.29
KDM4A-204ENST00000481296 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
KDM4A-204ENST00000481296 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
KDM4A-204ENST00000481296 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
KDM4A-204ENST00000481296 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
KDM4A-204ENST00000481296 TOM1O60784 492 aa13.21□□□□□ -0.29
KDM4A-204ENST00000481296 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
KDM4A-204ENST00000481296 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
KDM4A-204ENST00000481296 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
KDM4A-204ENST00000481296 PANK3Q9H999 370 aa13.2□□□□□ -0.3
KDM4A-204ENST00000481296 LTN1O94822 1766 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms