RNA–Protein interactions for RNA: ENST00000481047.1

MDK-208, Transcript of midkine, human

TSL 2

Gene MDK, Length 775 nt, Biotype retained intron, Subcellular localisation Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDK-208	ENST00000481047	SHPRH	Q149N8	1683 aa		33.65	■■■□□ 2.98
MDK-208	ENST00000481047	SPATA31A6	Q5VVP1	1343 aa		33.65	■■■□□ 2.98
MDK-208	ENST00000481047	PLEKHH1	Q9ULM0	1364 aa		33.63	■■■□□ 2.97
MDK-208	ENST00000481047	SIRT1	Q96EB6	747 aa		33.63	■■■□□ 2.97
MDK-208	ENST00000481047	SOCS7	O14512	581 aa		33.62	■■■□□ 2.97
MDK-208	ENST00000481047	LRRC59	Q96AG4	307 aa	Known RBP	33.59	■■■□□ 2.97
MDK-208	ENST00000481047	ORAI2	Q96SN7	254 aa		33.58	■■■□□ 2.97
MDK-208	ENST00000481047	DDX17	Q92841	729 aa	Known RBP	33.57	■■■□□ 2.96
MDK-208	ENST00000481047	DLC1	Q96QB1	1528 aa		33.57	■■■□□ 2.96
MDK-208	ENST00000481047	ADGRB1	O14514	1584 aa		33.56	■■■□□ 2.96
MDK-208	ENST00000481047	MEX3C	Q5U5Q3	659 aa	Known RBP	33.55	■■■□□ 2.96
MDK-208	ENST00000481047	ESCO1	Q5FWF5	840 aa		33.54	■■■□□ 2.96
MDK-208	ENST00000481047	PRAM1	Q96QH2	718 aa		33.54	■■■□□ 2.96
MDK-208	ENST00000481047	POGK	Q9P215	609 aa		33.53	■■■□□ 2.96
MDK-208	ENST00000481047	LRP6	O75581	1613 aa		33.53	■■■□□ 2.96
MDK-208	ENST00000481047	RGS17	Q9UGC6	210 aa	Predicted RBP	33.52	■■■□□ 2.96
MDK-208	ENST00000481047	FMN2	Q9NZ56	1722 aa		33.51	■■■□□ 2.96
MDK-208	ENST00000481047	NUTM2F	A1L443	756 aa		33.5	■■■□□ 2.95
MDK-208	ENST00000481047	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.49	■■■□□ 2.95
MDK-208	ENST00000481047	NPHP3	Q7Z494	1330 aa		33.49	■■■□□ 2.95
MDK-208	ENST00000481047	TRAK1	Q9UPV9	953 aa		33.48	■■■□□ 2.95
MDK-208	ENST00000481047	SOS2	Q07890	1332 aa	Predicted RBP	33.48	■■■□□ 2.95
MDK-208	ENST00000481047	PNPLA6	Q8IY17	1366 aa		33.47	■■■□□ 2.95
MDK-208	ENST00000481047	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.47	■■■□□ 2.95
MDK-208	ENST00000481047	NUTM2E	B1AL46	878 aa	Predicted RBP	33.47	■■■□□ 2.95
MDK-208	ENST00000481047	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.47	■■■□□ 2.95
MDK-208	ENST00000481047	TRIM26	Q12899	539 aa	Predicted RBP	33.46	■■■□□ 2.95
MDK-208	ENST00000481047	KIF1A	Q12756	1690 aa		33.42	■■■□□ 2.94
MDK-208	ENST00000481047	ADGRB2	O60241	1585 aa		33.41	■■■□□ 2.94
MDK-208	ENST00000481047	KIAA1210	Q9ULL0	1709 aa		33.39	■■■□□ 2.94
MDK-208	ENST00000481047	FOXO3	O43524	673 aa		33.39	■■■□□ 2.94
MDK-208	ENST00000481047	POTEA	Q6S8J7	498 aa		33.38	■■■□□ 2.93
MDK-208	ENST00000481047	PXDN	Q92626	1479 aa		33.37	■■■□□ 2.93
MDK-208	ENST00000481047	ZNF772	Q68DY9	489 aa	Predicted RBP	33.36	■■■□□ 2.93
MDK-208	ENST00000481047	EIF3A	Q14152	1382 aa	Known RBP	33.35	■■■□□ 2.93
MDK-208	ENST00000481047	ANKAR	Q7Z5J8	1434 aa		33.35	■■■□□ 2.93
MDK-208	ENST00000481047	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.34	■■■□□ 2.93
MDK-208	ENST00000481047	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.34	■■■□□ 2.93
MDK-208	ENST00000481047	XPC	Q01831	940 aa	Predicted RBP	33.33	■■■□□ 2.93
MDK-208	ENST00000481047	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.33	■■■□□ 2.93
MDK-208	ENST00000481047	PHF8	Q9UPP1	1060 aa		33.32	■■■□□ 2.92
MDK-208	ENST00000481047	SIN3A	Q96ST3	1273 aa		33.31	■■■□□ 2.92
MDK-208	ENST00000481047	NEUROD1	Q13562	356 aa		33.3	■■■□□ 2.92
MDK-208	ENST00000481047	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.3	■■■□□ 2.92
MDK-208	ENST00000481047	L3MBTL2	Q969R5	705 aa		33.29	■■■□□ 2.92
MDK-208	ENST00000481047	RGPD8	O14715	1765 aa	Predicted RBP	33.29	■■■□□ 2.92
MDK-208	ENST00000481047	C8orf37	Q96NL8	207 aa		33.28	■■■□□ 2.92
MDK-208	ENST00000481047	TULP4	Q9NRJ4	1543 aa		33.27	■■■□□ 2.92
MDK-208	ENST00000481047	AFF2	P51816	1311 aa		33.27	■■■□□ 2.92
MDK-208	ENST00000481047	USP32	Q8NFA0	1604 aa		33.25	■■■□□ 2.91
MDK-208	ENST00000481047	WASL	O00401	505 aa	Predicted RBP	33.25	■■■□□ 2.91
MDK-208	ENST00000481047	ADAMTS2	O95450	1211 aa		33.25	■■■□□ 2.91
MDK-208	ENST00000481047	PSME1	Q06323	249 aa		33.24	■■■□□ 2.91
MDK-208	ENST00000481047	KRT28	Q7Z3Y7	464 aa		33.24	■■■□□ 2.91
MDK-208	ENST00000481047	NBPF1	Q3BBV0	1214 aa		33.23	■■■□□ 2.91
MDK-208	ENST00000481047	SPATA31A3	Q5VYP0	1347 aa		33.21	■■■□□ 2.91
MDK-208	ENST00000481047	PMFBP1	Q8TBY8	1022 aa		33.19	■■■□□ 2.9
MDK-208	ENST00000481047	NGLY1	Q96IV0	654 aa		33.19	■■■□□ 2.9
MDK-208	ENST00000481047	TNS3	Q68CZ2	1445 aa		33.19	■■■□□ 2.9
MDK-208	ENST00000481047	PRR36	Q9H6K5	1346 aa		33.16	■■■□□ 2.9
MDK-208	ENST00000481047	SBNO1	A3KN83	1393 aa		33.16	■■■□□ 2.9
MDK-208	ENST00000481047	ITSN1	Q15811	1721 aa		33.14	■■■□□ 2.89
MDK-208	ENST00000481047	GPRASP1	Q5JY77	1395 aa		33.13	■■■□□ 2.89
MDK-208	ENST00000481047	RXRB	P28702	533 aa		33.13	■■■□□ 2.89
MDK-208	ENST00000481047	TRPM1	Q7Z4N2	1603 aa		33.13	■■■□□ 2.89
MDK-208	ENST00000481047	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.12	■■■□□ 2.89
MDK-208	ENST00000481047	ATP7B	P35670	1465 aa		33.12	■■■□□ 2.89
MDK-208	ENST00000481047	ARHGEF10	O15013	1369 aa		33.11	■■■□□ 2.89
MDK-208	ENST00000481047	LMOD2	Q6P5Q4	547 aa		33.1	■■■□□ 2.89
MDK-208	ENST00000481047	CDK19	Q9BWU1	502 aa		33.1	■■■□□ 2.89
MDK-208	ENST00000481047	ROCK2	O75116	1388 aa	Known RBP	33.09	■■■□□ 2.89
MDK-208	ENST00000481047	HAP1	P54257	671 aa	Predicted RBP	33.09	■■■□□ 2.89
MDK-208	ENST00000481047	NGDN	Q8NEJ9	315 aa	Known RBP	33.09	■■■□□ 2.89
MDK-208	ENST00000481047	NUDT16	Q96DE0	195 aa	Known RBP	33.09	■■■□□ 2.89
MDK-208	ENST00000481047	TONSL	Q96HA7	1378 aa		33.09	■■■□□ 2.89
MDK-208	ENST00000481047	MARF1	Q9Y4F3	1742 aa	Known RBP	33.08	■■■□□ 2.89
MDK-208	ENST00000481047	QTRT2	Q9H974	415 aa	Known RBP	33.07	■■■□□ 2.88
MDK-208	ENST00000481047	USP21	Q9UK80	565 aa		33.07	■■■□□ 2.88
MDK-208	ENST00000481047	QRICH2	Q9H0J4	1663 aa		33.05	■■■□□ 2.88
MDK-208	ENST00000481047	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.05	■■■□□ 2.88
MDK-208	ENST00000481047	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.04	■■■□□ 2.88
MDK-208	ENST00000481047	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.03	■■■□□ 2.88
MDK-208	ENST00000481047	RBM6	P78332	1123 aa	Known RBP	33.03	■■■□□ 2.88
MDK-208	ENST00000481047	TRPC5	Q9UL62	973 aa	Predicted RBP	33.01	■■■□□ 2.87
MDK-208	ENST00000481047	TOPAZ1	Q8N9V7	1692 aa		33.01	■■■□□ 2.87
MDK-208	ENST00000481047	PLEKHG5	O94827	1062 aa		33	■■■□□ 2.87
MDK-208	ENST00000481047	SRPK2	P78362	688 aa	Known RBP	33	■■■□□ 2.87
MDK-208	ENST00000481047	CCDC61	Q9Y6R9	512 aa		32.99	■■■□□ 2.87
MDK-208	ENST00000481047	PAK3	O75914	559 aa	Predicted RBP	32.97	■■■□□ 2.87
MDK-208	ENST00000481047	CABLES1	Q8TDN4	633 aa		32.97	■■■□□ 2.87
MDK-208	ENST00000481047	PCGF6	Q9BYE7	350 aa		32.97	■■■□□ 2.87
MDK-208	ENST00000481047	ALS2	Q96Q42	1657 aa		32.97	■■■□□ 2.87
MDK-208	ENST00000481047	ABCA3	Q99758	1704 aa		32.97	■■■□□ 2.87
MDK-208	ENST00000481047	NBPF8	Q3BBV2	869 aa		32.95	■■■□□ 2.87
MDK-208	ENST00000481047	ATRN	O75882	1429 aa		32.94	■■■□□ 2.86
MDK-208	ENST00000481047	POLR3A	O14802	1390 aa	Predicted RBP	32.93	■■■□□ 2.86
MDK-208	ENST00000481047	RGS12	O14924	1447 aa		32.93	■■■□□ 2.86
MDK-208	ENST00000481047	BCL9L	Q86UU0	1499 aa		32.93	■■■□□ 2.86
MDK-208	ENST00000481047	ACE	P12821	1306 aa		32.92	■■■□□ 2.86
MDK-208	ENST00000481047	PLEKHG3	A1L390	1219 aa		32.91	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms