RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
EWSR1-216ENST00000479135 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
EWSR1-216ENST00000479135 STK26Q9P289 416 aa13.17□□□□□ -0.3
EWSR1-216ENST00000479135 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
EWSR1-216ENST00000479135 SMC4Q9NTJ3 1288 aa13.17□□□□□ -0.3
EWSR1-216ENST00000479135 COMMD10Q9Y6G5 202 aa13.17□□□□□ -0.3
EWSR1-216ENST00000479135 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
EWSR1-216ENST00000479135 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
EWSR1-216ENST00000479135 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
EWSR1-216ENST00000479135 POLD1P28340 1107 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 HSP90AB4PQ58FF6 505 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 NOL10Q9BSC4 688 aaKnown RBP13.16□□□□□ -0.3
EWSR1-216ENST00000479135 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 ERCC3P19447 782 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
EWSR1-216ENST00000479135 MATR3P43243 847 aaKnown RBP eCLIP13.15□□□□□ -0.3
EWSR1-216ENST00000479135 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 ANKRD45Q5TZF3 282 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 CCDC91Q7Z6B0 441 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 TSPY4P0CV99 314 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 TSPY10P0CW01 314 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 DNA2P51530 1060 aa13.15□□□□□ -0.3
EWSR1-216ENST00000479135 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
EWSR1-216ENST00000479135 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
EWSR1-216ENST00000479135 POLR3GO15318 223 aaPredicted RBP13.14□□□□□ -0.31
EWSR1-216ENST00000479135 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
EWSR1-216ENST00000479135 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
EWSR1-216ENST00000479135 BRPF3Q9ULD4 1205 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 MLECQ14165 292 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
EWSR1-216ENST00000479135 UQCRHLA0A096LP55 91 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 CCP110O43303 1012 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 UQCRHP07919 91 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
EWSR1-216ENST00000479135 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 ANAPC15P60006 121 aa13.13□□□□□ -0.31
EWSR1-216ENST00000479135 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
EWSR1-216ENST00000479135 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
EWSR1-216ENST00000479135 SEPT8Q92599 483 aa13.12□□□□□ -0.31
EWSR1-216ENST00000479135 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
EWSR1-216ENST00000479135 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
EWSR1-216ENST00000479135 KRT18P05783 430 aaKnown RBP13.12□□□□□ -0.31
EWSR1-216ENST00000479135 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
EWSR1-216ENST00000479135 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
EWSR1-216ENST00000479135 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
EWSR1-216ENST00000479135 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
EWSR1-216ENST00000479135 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
EWSR1-216ENST00000479135 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.311e-11■■□□□ 12.6
EWSR1-216ENST00000479135 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
EWSR1-216ENST00000479135 MICALCLQ6ZW33 695 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
EWSR1-216ENST00000479135 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
EWSR1-216ENST00000479135 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
EWSR1-216ENST00000479135 TERF1P54274 439 aa13.09□□□□□ -0.31
EWSR1-216ENST00000479135 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
EWSR1-216ENST00000479135 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
EWSR1-216ENST00000479135 ERICH2A1L162 156 aa13.09□□□□□ -0.31
EWSR1-216ENST00000479135 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.318e-9■□□□□ 10.7
EWSR1-216ENST00000479135 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
EWSR1-216ENST00000479135 CCDC73Q6ZRK6 1079 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 NFKBIBQ15653 356 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 CDK5RAP3Q96JB5 506 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 NACADO15069 1562 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 RFC1P35251 1148 aaPredicted RBP13.08□□□□□ -0.32
EWSR1-216ENST00000479135 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
EWSR1-216ENST00000479135 RPUSD2Q8IZ73 545 aaKnown RBP13.07□□□□□ -0.32
EWSR1-216ENST00000479135 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
EWSR1-216ENST00000479135 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.07□□□□□ -0.32
EWSR1-216ENST00000479135 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
EWSR1-216ENST00000479135 MPHOSPH10O00566 681 aaKnown RBP13.06□□□□□ -0.32
EWSR1-216ENST00000479135 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
EWSR1-216ENST00000479135 PSMC4P43686 418 aa13.06□□□□□ -0.32
EWSR1-216ENST00000479135 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
EWSR1-216ENST00000479135 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
EWSR1-216ENST00000479135 DRC1Q96MC2 740 aa13.06□□□□□ -0.32
EWSR1-216ENST00000479135 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
EWSR1-216ENST00000479135 SERPINC1P01008 464 aa13.05□□□□□ -0.32
EWSR1-216ENST00000479135 ATP2B2Q01814 1243 aa13.05□□□□□ -0.32
EWSR1-216ENST00000479135 MORC4Q8TE76 937 aa13.05□□□□□ -0.32
EWSR1-216ENST00000479135 SMC3Q9UQE7 1217 aa13.05□□□□□ -0.32
EWSR1-216ENST00000479135 PLIN1O60240 522 aa13.05□□□□□ -0.32
EWSR1-216ENST00000479135 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.32
EWSR1-216ENST00000479135 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms