RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 TIMELESSQ9UNS1 1208 aa21.72■■□□□ 1.07
COL16A1-211ENST00000479100 TRAK1Q9UPV9 953 aa21.72■■□□□ 1.07
COL16A1-211ENST00000479100 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
COL16A1-211ENST00000479100 ABCC11Q96J66 1382 aa21.72■■□□□ 1.07
COL16A1-211ENST00000479100 MST1RQ04912 1400 aa21.72■■□□□ 1.07
COL16A1-211ENST00000479100 PHLPP1O60346 1717 aa21.7■■□□□ 1.06
COL16A1-211ENST00000479100 WAPLQ7Z5K2 1190 aa21.7■■□□□ 1.06
COL16A1-211ENST00000479100 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
COL16A1-211ENST00000479100 ADGRB1O14514 1584 aa21.7■■□□□ 1.06
COL16A1-211ENST00000479100 PTCH1Q13635 1447 aa21.69■■□□□ 1.06
COL16A1-211ENST00000479100 POGKQ9P215 609 aa21.68■■□□□ 1.06
COL16A1-211ENST00000479100 SPATA31A6Q5VVP1 1343 aa21.68■■□□□ 1.06
COL16A1-211ENST00000479100 KIAA1210Q9ULL0 1709 aa21.68■■□□□ 1.06
COL16A1-211ENST00000479100 TECPR2O15040 1411 aa21.67■■□□□ 1.06
COL16A1-211ENST00000479100 ROCK2O75116 1388 aaKnown RBP21.67■■□□□ 1.06
COL16A1-211ENST00000479100 SAFB2Q14151 953 aaKnown RBP eCLIP21.67■■□□□ 1.06
COL16A1-211ENST00000479100 PRAM1Q96QH2 718 aa21.66■■□□□ 1.06
COL16A1-211ENST00000479100 LRP6O75581 1613 aa21.66■■□□□ 1.06
COL16A1-211ENST00000479100 PLEKHH1Q9ULM0 1364 aa21.65■■□□□ 1.06
COL16A1-211ENST00000479100 TRPM1Q7Z4N2 1603 aa21.65■■□□□ 1.06
COL16A1-211ENST00000479100 SIRT1Q96EB6 747 aa21.64■■□□□ 1.05
COL16A1-211ENST00000479100 KNDC1Q76NI1 1749 aa21.63■■□□□ 1.05
COL16A1-211ENST00000479100 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
COL16A1-211ENST00000479100 DLC1Q96QB1 1528 aa21.6■■□□□ 1.05
COL16A1-211ENST00000479100 RALGAPBQ86X10 1494 aa21.6■■□□□ 1.05
COL16A1-211ENST00000479100 C1orf167Q5SNV9 1468 aa21.59■■□□□ 1.05
COL16A1-211ENST00000479100 DDX17Q92841 729 aaKnown RBP21.59■■□□□ 1.05
COL16A1-211ENST00000479100 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.04
COL16A1-211ENST00000479100 MINK1Q8N4C8 1332 aaPredicted RBP21.57■■□□□ 1.04
COL16A1-211ENST00000479100 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
COL16A1-211ENST00000479100 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
COL16A1-211ENST00000479100 GPRASP1Q5JY77 1395 aa21.56■■□□□ 1.04
COL16A1-211ENST00000479100 SHPRHQ149N8 1683 aa21.56■■□□□ 1.04
COL16A1-211ENST00000479100 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
COL16A1-211ENST00000479100 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
COL16A1-211ENST00000479100 ARHGEF28Q8N1W1 1705 aaKnown RBP21.54■■□□□ 1.04
COL16A1-211ENST00000479100 CENPJQ9HC77 1338 aaPredicted RBP21.54■■□□□ 1.04
COL16A1-211ENST00000479100 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
COL16A1-211ENST00000479100 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
COL16A1-211ENST00000479100 SOS2Q07890 1332 aaPredicted RBP21.53■■□□□ 1.04
COL16A1-211ENST00000479100 PNPLA6Q8IY17 1366 aa21.52■■□□□ 1.04
COL16A1-211ENST00000479100 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
COL16A1-211ENST00000479100 EIF3AQ14152 1382 aaKnown RBP21.51■■□□□ 1.03
COL16A1-211ENST00000479100 NUTM2BA6NNL0 878 aaPredicted RBP21.51■■□□□ 1.03
COL16A1-211ENST00000479100 NUTM2EB1AL46 878 aaPredicted RBP21.51■■□□□ 1.03
COL16A1-211ENST00000479100 NUTM2AQ8IVF1 878 aaPredicted RBP21.51■■□□□ 1.03
COL16A1-211ENST00000479100 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
COL16A1-211ENST00000479100 WASLO00401 505 aaPredicted RBP21.46■■□□□ 1.03
COL16A1-211ENST00000479100 AFF2P51816 1311 aa21.44■■□□□ 1.02
COL16A1-211ENST00000479100 ESCO1Q5FWF5 840 aa21.43■■□□□ 1.02
COL16A1-211ENST00000479100 CDK19Q9BWU1 502 aa21.43■■□□□ 1.02
COL16A1-211ENST00000479100 USP47Q96K76 1375 aa21.43■■□□□ 1.02
COL16A1-211ENST00000479100 QRICH2Q9H0J4 1663 aa21.43■■□□□ 1.02
COL16A1-211ENST00000479100 ST20-MTHFSA0A0A6YYL1 179 aa21.42■■□□□ 1.02
COL16A1-211ENST00000479100 ADGRB2O60241 1585 aa21.42■■□□□ 1.02
COL16A1-211ENST00000479100 RXRBP28702 533 aa21.41■■□□□ 1.02
COL16A1-211ENST00000479100 SRPK2P78362 688 aaKnown RBP21.41■■□□□ 1.02
COL16A1-211ENST00000479100 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
COL16A1-211ENST00000479100 C8orf37Q96NL8 207 aa21.4■■□□□ 1.02
COL16A1-211ENST00000479100 NPHP3Q7Z494 1330 aa21.39■■□□□ 1.01
COL16A1-211ENST00000479100 EVC2Q86UK5 1308 aa21.39■■□□□ 1.01
COL16A1-211ENST00000479100 FOXO3O43524 673 aa21.38■■□□□ 1.01
COL16A1-211ENST00000479100 CABP2Q9NPB3 220 aa21.38■■□□□ 1.01
COL16A1-211ENST00000479100 ADAMTS2O95450 1211 aa21.37■■□□□ 1.01
COL16A1-211ENST00000479100 NUDT16Q96DE0 195 aaKnown RBP21.37■■□□□ 1.01
COL16A1-211ENST00000479100 PXDNQ92626 1479 aa21.37■■□□□ 1.01
COL16A1-211ENST00000479100 CDK12Q9NYV4 1490 aaPredicted RBP21.37■■□□□ 1.01
COL16A1-211ENST00000479100 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
COL16A1-211ENST00000479100 ANKARQ7Z5J8 1434 aa21.36■■□□□ 1.01
COL16A1-211ENST00000479100 TULP4Q9NRJ4 1543 aa21.35■■□□□ 1.01
COL16A1-211ENST00000479100 EIF4G2P78344 907 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL16A1-211ENST00000479100 PHF8Q9UPP1 1060 aa21.35■■□□□ 1.01
COL16A1-211ENST00000479100 FNBP4Q8N3X1 1017 aaPredicted RBP21.34■■□□□ 1.01
COL16A1-211ENST00000479100 PMFBP1Q8TBY8 1022 aa21.34■■□□□ 1.01
COL16A1-211ENST00000479100 NGLY1Q96IV0 654 aa21.34■■□□□ 1.01
COL16A1-211ENST00000479100 QTRT2Q9H974 415 aaKnown RBP21.34■■□□□ 1.01
COL16A1-211ENST00000479100 SBNO2Q9Y2G9 1366 aa21.34■■□□□ 1.01
COL16A1-211ENST00000479100 HSPA5P11021 654 aaKnown RBP21.33■■□□□ 1.01
COL16A1-211ENST00000479100 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1.01
COL16A1-211ENST00000479100 UPF1Q92900 1129 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL16A1-211ENST00000479100 TESK2Q96S53 571 aa21.33■■□□□ 1.01
COL16A1-211ENST00000479100 RBM6P78332 1123 aaKnown RBP21.32■■□□□ 1
COL16A1-211ENST00000479100 RGPD8O14715 1765 aaPredicted RBP21.31■■□□□ 1
COL16A1-211ENST00000479100 USP32Q8NFA0 1604 aa21.31■■□□□ 1
COL16A1-211ENST00000479100 COL22A1Q8NFW1 1626 aaPredicted RBP21.3■■□□□ 1
COL16A1-211ENST00000479100 SLC24A1O60721 1099 aa21.3■■□□□ 1
COL16A1-211ENST00000479100 CCDC61Q9Y6R9 512 aa21.3■■□□□ 1
COL16A1-211ENST00000479100 ATP7BP35670 1465 aa21.3■■□□□ 1
COL16A1-211ENST00000479100 TMF1P82094 1093 aa21.29■■□□□ 1
COL16A1-211ENST00000479100 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
COL16A1-211ENST00000479100 USP21Q9UK80 565 aa21.28■■□□□ 1
COL16A1-211ENST00000479100 RGS12O14924 1447 aa21.28■■□□□ 1
COL16A1-211ENST00000479100 SPATA31A3Q5VYP0 1347 aa21.28■■□□□ 1
COL16A1-211ENST00000479100 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
COL16A1-211ENST00000479100 PSME1Q06323 249 aa21.27■■□□□ 1
COL16A1-211ENST00000479100 KIF1AQ12756 1690 aa21.25■□□□□ 0.99
COL16A1-211ENST00000479100 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
COL16A1-211ENST00000479100 KRT28Q7Z3Y7 464 aa21.25■□□□□ 0.99
COL16A1-211ENST00000479100 CABP1Q9NZU7 370 aa21.25■□□□□ 0.99
COL16A1-211ENST00000479100 TRPC5Q9UL62 973 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms