RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
CDKN1A-207ENST00000478800 SIN3AQ96ST3 1273 aa24.49■■□□□ 1.51
CDKN1A-207ENST00000478800 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
CDKN1A-207ENST00000478800 JCADQ9P266 1359 aa24.49■■□□□ 1.51
CDKN1A-207ENST00000478800 KNDC1Q76NI1 1749 aa24.49■■□□□ 1.51
CDKN1A-207ENST00000478800 SAFB2Q14151 953 aaKnown RBP eCLIP24.47■■□□□ 1.51
CDKN1A-207ENST00000478800 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
CDKN1A-207ENST00000478800 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
CDKN1A-207ENST00000478800 ESCO1Q5FWF5 840 aa24.45■■□□□ 1.5
CDKN1A-207ENST00000478800 ORAI2Q96SN7 254 aa24.45■■□□□ 1.5
CDKN1A-207ENST00000478800 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
CDKN1A-207ENST00000478800 ADGRB1O14514 1584 aa24.44■■□□□ 1.5
CDKN1A-207ENST00000478800 L3MBTL2Q969R5 705 aa24.43■■□□□ 1.5
CDKN1A-207ENST00000478800 DLC1Q96QB1 1528 aa24.42■■□□□ 1.5
CDKN1A-207ENST00000478800 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
CDKN1A-207ENST00000478800 COL16A1Q07092 1604 aaPredicted RBP24.42■■□□□ 1.5
CDKN1A-207ENST00000478800 DDX17Q92841 729 aaKnown RBP24.41■■□□□ 1.5
CDKN1A-207ENST00000478800 SPATA31A6Q5VVP1 1343 aa24.38■■□□□ 1.49
CDKN1A-207ENST00000478800 MINK1Q8N4C8 1332 aaPredicted RBP24.36■■□□□ 1.49
CDKN1A-207ENST00000478800 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
CDKN1A-207ENST00000478800 MEX3CQ5U5Q3 659 aaKnown RBP24.35■■□□□ 1.49
CDKN1A-207ENST00000478800 NBPF1Q3BBV0 1214 aa24.34■■□□□ 1.49
CDKN1A-207ENST00000478800 HIRIP3Q9BW71 556 aaPredicted RBP24.34■■□□□ 1.49
CDKN1A-207ENST00000478800 NHSL1Q5SYE7 1610 aa24.34■■□□□ 1.49
CDKN1A-207ENST00000478800 FOXO3O43524 673 aa24.33■■□□□ 1.49
CDKN1A-207ENST00000478800 NUTM2BA6NNL0 878 aaPredicted RBP24.32■■□□□ 1.48
CDKN1A-207ENST00000478800 NUTM2EB1AL46 878 aaPredicted RBP24.32■■□□□ 1.48
CDKN1A-207ENST00000478800 NUTM2AQ8IVF1 878 aaPredicted RBP24.32■■□□□ 1.48
CDKN1A-207ENST00000478800 SOS2Q07890 1332 aaPredicted RBP24.32■■□□□ 1.48
CDKN1A-207ENST00000478800 EIF3AQ14152 1382 aaKnown RBP24.31■■□□□ 1.48
CDKN1A-207ENST00000478800 TONSLQ96HA7 1378 aa24.31■■□□□ 1.48
CDKN1A-207ENST00000478800 RGS17Q9UGC6 210 aaPredicted RBP24.31■■□□□ 1.48
CDKN1A-207ENST00000478800 KIAA1210Q9ULL0 1709 aa24.31■■□□□ 1.48
CDKN1A-207ENST00000478800 PCGF6Q9BYE7 350 aa24.3■■□□□ 1.48
CDKN1A-207ENST00000478800 FMN2Q9NZ56 1722 aa24.3■■□□□ 1.48
CDKN1A-207ENST00000478800 WASLO00401 505 aaPredicted RBP24.28■■□□□ 1.48
CDKN1A-207ENST00000478800 PHF8Q9UPP1 1060 aa24.28■■□□□ 1.48
CDKN1A-207ENST00000478800 SHPRHQ149N8 1683 aa24.27■■□□□ 1.48
CDKN1A-207ENST00000478800 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
CDKN1A-207ENST00000478800 PNPLA6Q8IY17 1366 aa24.27■■□□□ 1.48
CDKN1A-207ENST00000478800 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
CDKN1A-207ENST00000478800 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
CDKN1A-207ENST00000478800 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
CDKN1A-207ENST00000478800 PSME1Q06323 249 aa24.23■■□□□ 1.47
CDKN1A-207ENST00000478800 ARHGEF28Q8N1W1 1705 aaKnown RBP24.22■■□□□ 1.47
CDKN1A-207ENST00000478800 KIF1AQ12756 1690 aa24.22■■□□□ 1.47
CDKN1A-207ENST00000478800 LRP6O75581 1613 aa24.22■■□□□ 1.47
CDKN1A-207ENST00000478800 CENPJQ9HC77 1338 aaPredicted RBP24.22■■□□□ 1.47
CDKN1A-207ENST00000478800 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
CDKN1A-207ENST00000478800 PMFBP1Q8TBY8 1022 aa24.22■■□□□ 1.47
CDKN1A-207ENST00000478800 PXDNQ92626 1479 aa24.2■■□□□ 1.47
CDKN1A-207ENST00000478800 CDK19Q9BWU1 502 aa24.19■■□□□ 1.46
CDKN1A-207ENST00000478800 TULP4Q9NRJ4 1543 aa24.19■■□□□ 1.46
CDKN1A-207ENST00000478800 ADAMTS2O95450 1211 aa24.17■■□□□ 1.46
CDKN1A-207ENST00000478800 NBPF8Q3BBV2 869 aa24.17■■□□□ 1.46
CDKN1A-207ENST00000478800 ZNF772Q68DY9 489 aaPredicted RBP24.17■■□□□ 1.46
CDKN1A-207ENST00000478800 POTEAQ6S8J7 498 aa24.17■■□□□ 1.46
CDKN1A-207ENST00000478800 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
CDKN1A-207ENST00000478800 PRR36Q9H6K5 1346 aa24.16■■□□□ 1.46
CDKN1A-207ENST00000478800 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
CDKN1A-207ENST00000478800 GPRASP1Q5JY77 1395 aa24.16■■□□□ 1.46
CDKN1A-207ENST00000478800 SPATA31A3Q5VYP0 1347 aa24.15■■□□□ 1.46
CDKN1A-207ENST00000478800 TRPM1Q7Z4N2 1603 aa24.15■■□□□ 1.46
CDKN1A-207ENST00000478800 SRPK2P78362 688 aaKnown RBP24.15■■□□□ 1.46
CDKN1A-207ENST00000478800 LMOD2Q6P5Q4 547 aa24.15■■□□□ 1.46
CDKN1A-207ENST00000478800 C8orf37Q96NL8 207 aa24.15■■□□□ 1.46
CDKN1A-207ENST00000478800 CARD11Q9BXL7 1154 aa24.14■■□□□ 1.45
CDKN1A-207ENST00000478800 NGLY1Q96IV0 654 aa24.13■■□□□ 1.45
CDKN1A-207ENST00000478800 RGPD8O14715 1765 aaPredicted RBP24.12■■□□□ 1.45
CDKN1A-207ENST00000478800 USP32Q8NFA0 1604 aa24.12■■□□□ 1.45
CDKN1A-207ENST00000478800 HAP1P54257 671 aaPredicted RBP24.11■■□□□ 1.45
CDKN1A-207ENST00000478800 CCDC61Q9Y6R9 512 aa24.11■■□□□ 1.45
CDKN1A-207ENST00000478800 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
CDKN1A-207ENST00000478800 AFF2P51816 1311 aa24.1■■□□□ 1.45
CDKN1A-207ENST00000478800 TNS3Q68CZ2 1445 aa24.1■■□□□ 1.45
CDKN1A-207ENST00000478800 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
CDKN1A-207ENST00000478800 ARHGEF10O15013 1369 aa24.09■■□□□ 1.45
CDKN1A-207ENST00000478800 EVC2Q86UK5 1308 aa24.09■■□□□ 1.45
CDKN1A-207ENST00000478800 ATP7BP35670 1465 aa24.08■■□□□ 1.45
CDKN1A-207ENST00000478800 PLEKHG5O94827 1062 aa24.08■■□□□ 1.45
CDKN1A-207ENST00000478800 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
CDKN1A-207ENST00000478800 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
CDKN1A-207ENST00000478800 CABP2Q9NPB3 220 aa24.07■■□□□ 1.44
CDKN1A-207ENST00000478800 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
CDKN1A-207ENST00000478800 RALGAPBQ86X10 1494 aa24.06■■□□□ 1.44
CDKN1A-207ENST00000478800 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
CDKN1A-207ENST00000478800 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
CDKN1A-207ENST00000478800 TIMELESSQ9UNS1 1208 aa24.03■■□□□ 1.44
CDKN1A-207ENST00000478800 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
CDKN1A-207ENST00000478800 RXRBP28702 533 aa24.02■■□□□ 1.44
CDKN1A-207ENST00000478800 ACEP12821 1306 aa24.02■■□□□ 1.44
CDKN1A-207ENST00000478800 CABLES1Q8TDN4 633 aa24.01■■□□□ 1.43
CDKN1A-207ENST00000478800 USP21Q9UK80 565 aa24.01■■□□□ 1.43
CDKN1A-207ENST00000478800 PPIP5K1Q6PFW1 1433 aa24.01■■□□□ 1.43
CDKN1A-207ENST00000478800 QTRT2Q9H974 415 aaKnown RBP24■■□□□ 1.43
CDKN1A-207ENST00000478800 POLR3AO14802 1390 aaPredicted RBP23.99■■□□□ 1.43
CDKN1A-207ENST00000478800 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
CDKN1A-207ENST00000478800 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
CDKN1A-207ENST00000478800 TRPC5Q9UL62 973 aaPredicted RBP23.96■■□□□ 1.43
CDKN1A-207ENST00000478800 RBM6P78332 1123 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms