RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
AFF4-208ENST00000478588 PLA2G2CQ5R387 149 aa9.72□□□□□ -0.85
AFF4-208ENST00000478588 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
AFF4-208ENST00000478588 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
AFF4-208ENST00000478588 USB1Q9BQ65 265 aaKnown RBP9.71□□□□□ -0.86
AFF4-208ENST00000478588 MYSM1Q5VVJ2 828 aa9.7□□□□□ -0.86
AFF4-208ENST00000478588 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
AFF4-208ENST00000478588 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
AFF4-208ENST00000478588 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
AFF4-208ENST00000478588 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
AFF4-208ENST00000478588 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
AFF4-208ENST00000478588 SPTLC1O15269 473 aa9.68□□□□□ -0.86
AFF4-208ENST00000478588 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
AFF4-208ENST00000478588 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
AFF4-208ENST00000478588 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
AFF4-208ENST00000478588 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
AFF4-208ENST00000478588 SLC19A1P41440 591 aa9.67□□□□□ -0.86
AFF4-208ENST00000478588 DIXDC1Q155Q3 683 aa9.67□□□□□ -0.86
AFF4-208ENST00000478588 NEUROD2Q15784 382 aa9.67□□□□□ -0.86
AFF4-208ENST00000478588 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
AFF4-208ENST00000478588 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
AFF4-208ENST00000478588 MMP16P51512 607 aa9.66□□□□□ -0.86
AFF4-208ENST00000478588 RETREG3Q86VR2 466 aa9.66□□□□□ -0.86
AFF4-208ENST00000478588 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
AFF4-208ENST00000478588 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
AFF4-208ENST00000478588 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
AFF4-208ENST00000478588 DXOO77932 396 aaKnown RBP9.64□□□□□ -0.87
AFF4-208ENST00000478588 HRCP23327 699 aa9.64□□□□□ -0.87
AFF4-208ENST00000478588 MTMR2Q13614 643 aa9.64□□□□□ -0.87
AFF4-208ENST00000478588 GJA5P36382 358 aa9.63□□□□□ -0.87
AFF4-208ENST00000478588 QPCTQ16769 361 aa9.63□□□□□ -0.87
AFF4-208ENST00000478588 JUNDP17535 347 aa9.62□□□□□ -0.87
AFF4-208ENST00000478588 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
AFF4-208ENST00000478588 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
AFF4-208ENST00000478588 SPRYD7Q5W111 196 aa9.61□□□□□ -0.87
AFF4-208ENST00000478588 CCDC24Q8N4L8 307 aa9.61□□□□□ -0.87
AFF4-208ENST00000478588 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
AFF4-208ENST00000478588 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
AFF4-208ENST00000478588 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
AFF4-208ENST00000478588 FBXO31Q5XUX0 539 aaPredicted RBP9.6□□□□□ -0.87
AFF4-208ENST00000478588 IRX2Q9BZI1 471 aaPredicted RBP9.6□□□□□ -0.87
AFF4-208ENST00000478588 RSPH6AQ9H0K4 717 aa9.6□□□□□ -0.87
AFF4-208ENST00000478588 ZBTB3Q9H5J0 574 aa9.6□□□□□ -0.87
AFF4-208ENST00000478588 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
AFF4-208ENST00000478588 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
AFF4-208ENST00000478588 LILRB3O75022 631 aa9.58□□□□□ -0.88
AFF4-208ENST00000478588 SKIV2LQ15477 1246 aaKnown RBP9.58□□□□□ -0.88
AFF4-208ENST00000478588 SPDYE5A6NIY4 337 aa9.57□□□□□ -0.88
AFF4-208ENST00000478588 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 PRPF38BQ5VTL8 546 aaKnown RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 PTCRAQ6ISU1 281 aaPredicted RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 ZNF598Q86UK7 904 aaKnown RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
AFF4-208ENST00000478588 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
AFF4-208ENST00000478588 SH3D19Q5HYK7 790 aa9.56□□□□□ -0.88
AFF4-208ENST00000478588 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
AFF4-208ENST00000478588 TRIM67Q6ZTA4 783 aa9.56□□□□□ -0.88
AFF4-208ENST00000478588 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
AFF4-208ENST00000478588 GFRA3O60609 400 aa9.55□□□□□ -0.88
AFF4-208ENST00000478588 RPIAP49247 311 aa9.55□□□□□ -0.88
AFF4-208ENST00000478588 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
AFF4-208ENST00000478588 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
AFF4-208ENST00000478588 TSC1Q92574 1164 aa9.54□□□□□ -0.88
AFF4-208ENST00000478588 PER1O15534 1290 aaPredicted RBP9.53□□□□□ -0.88
AFF4-208ENST00000478588 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
AFF4-208ENST00000478588 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
AFF4-208ENST00000478588 PDZRN3Q9UPQ7 1066 aa9.53□□□□□ -0.88
AFF4-208ENST00000478588 CCNYL3P0C7X3 344 aa9.52□□□□□ -0.89
AFF4-208ENST00000478588 FOXC1Q12948 553 aa9.52□□□□□ -0.89
AFF4-208ENST00000478588 PTPRNQ16849 979 aa9.52□□□□□ -0.89
AFF4-208ENST00000478588 DESI1Q6ICB0 168 aa9.52□□□□□ -0.89
AFF4-208ENST00000478588 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
AFF4-208ENST00000478588 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.89
AFF4-208ENST00000478588 TNFRSF10AO00220 468 aa9.51□□□□□ -0.89
AFF4-208ENST00000478588 GDF9O60383 454 aa9.51□□□□□ -0.89
AFF4-208ENST00000478588 TRIM32Q13049 653 aa9.51□□□□□ -0.89
AFF4-208ENST00000478588 PKD2L1Q9P0L9 805 aa9.51□□□□□ -0.89
AFF4-208ENST00000478588 SKOR1P84550 965 aa9.49□□□□□ -0.89
AFF4-208ENST00000478588 KCNH2Q12809 1159 aa9.49□□□□□ -0.89
AFF4-208ENST00000478588 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
AFF4-208ENST00000478588 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
AFF4-208ENST00000478588 CTHP32929 405 aa9.47□□□□□ -0.89
AFF4-208ENST00000478588 UNC93B1Q9H1C4 597 aa9.47□□□□□ -0.89
AFF4-208ENST00000478588 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
AFF4-208ENST00000478588 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
AFF4-208ENST00000478588 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
AFF4-208ENST00000478588 Q6ZNB5 142 aa9.45□□□□□ -0.9
AFF4-208ENST00000478588 BAP1Q92560 729 aa9.45□□□□□ -0.9
AFF4-208ENST00000478588 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
AFF4-208ENST00000478588 PRR20EP86478 221 aa9.44□□□□□ -0.9
AFF4-208ENST00000478588 PRR20CP86479 221 aa9.44□□□□□ -0.9
AFF4-208ENST00000478588 PRR20DP86480 221 aa9.44□□□□□ -0.9
AFF4-208ENST00000478588 PRR20BP86481 221 aa9.44□□□□□ -0.9
AFF4-208ENST00000478588 PRR20AP86496 221 aa9.44□□□□□ -0.9
AFF4-208ENST00000478588 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
AFF4-208ENST00000478588 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
AFF4-208ENST00000478588 LCE2BO14633 110 aa9.43□□□□□ -0.9
AFF4-208ENST00000478588 SH3BP2P78314 561 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms