RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 WAPLQ7Z5K2 1190 aa23.35■■□□□ 1.33
CYTH3-206ENST00000478541 DLC1Q96QB1 1528 aa23.34■■□□□ 1.33
CYTH3-206ENST00000478541 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
CYTH3-206ENST00000478541 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
CYTH3-206ENST00000478541 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
CYTH3-206ENST00000478541 FMN2Q9NZ56 1722 aa23.31■■□□□ 1.32
CYTH3-206ENST00000478541 SPATA31A6Q5VVP1 1343 aa23.31■■□□□ 1.32
CYTH3-206ENST00000478541 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
CYTH3-206ENST00000478541 ORAI2Q96SN7 254 aa23.28■■□□□ 1.32
CYTH3-206ENST00000478541 LRRC59Q96AG4 307 aaKnown RBP23.27■■□□□ 1.32
CYTH3-206ENST00000478541 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
CYTH3-206ENST00000478541 LRP6O75581 1613 aa23.25■■□□□ 1.31
CYTH3-206ENST00000478541 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
CYTH3-206ENST00000478541 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
CYTH3-206ENST00000478541 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
CYTH3-206ENST00000478541 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
CYTH3-206ENST00000478541 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
CYTH3-206ENST00000478541 SOCS7O14512 581 aa23.22■■□□□ 1.31
CYTH3-206ENST00000478541 ESCO1Q5FWF5 840 aa23.22■■□□□ 1.31
CYTH3-206ENST00000478541 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
CYTH3-206ENST00000478541 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
CYTH3-206ENST00000478541 RGPD8O14715 1765 aaPredicted RBP23.2■■□□□ 1.3
CYTH3-206ENST00000478541 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
CYTH3-206ENST00000478541 POGKQ9P215 609 aa23.2■■□□□ 1.3
CYTH3-206ENST00000478541 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
CYTH3-206ENST00000478541 NPHP3Q7Z494 1330 aa23.19■■□□□ 1.3
CYTH3-206ENST00000478541 PXDNQ92626 1479 aa23.17■■□□□ 1.3
CYTH3-206ENST00000478541 NUTM2FA1L443 756 aa23.17■■□□□ 1.3
CYTH3-206ENST00000478541 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.3
CYTH3-206ENST00000478541 USP32Q8NFA0 1604 aa23.15■■□□□ 1.3
CYTH3-206ENST00000478541 COL22A1Q8NFW1 1626 aaPredicted RBP23.15■■□□□ 1.3
CYTH3-206ENST00000478541 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
CYTH3-206ENST00000478541 ANKARQ7Z5J8 1434 aa23.15■■□□□ 1.3
CYTH3-206ENST00000478541 L3MBTL2Q969R5 705 aa23.14■■□□□ 1.29
CYTH3-206ENST00000478541 FOXO3O43524 673 aa23.13■■□□□ 1.29
CYTH3-206ENST00000478541 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
CYTH3-206ENST00000478541 NUTM2BA6NNL0 878 aaPredicted RBP23.11■■□□□ 1.29
CYTH3-206ENST00000478541 NUTM2EB1AL46 878 aaPredicted RBP23.11■■□□□ 1.29
CYTH3-206ENST00000478541 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
CYTH3-206ENST00000478541 NUTM2AQ8IVF1 878 aaPredicted RBP23.11■■□□□ 1.29
CYTH3-206ENST00000478541 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
CYTH3-206ENST00000478541 TULP4Q9NRJ4 1543 aa23.1■■□□□ 1.29
CYTH3-206ENST00000478541 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
CYTH3-206ENST00000478541 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
CYTH3-206ENST00000478541 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
CYTH3-206ENST00000478541 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
CYTH3-206ENST00000478541 NEUROD1Q13562 356 aa23.08■■□□□ 1.29
CYTH3-206ENST00000478541 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
CYTH3-206ENST00000478541 WASLO00401 505 aaPredicted RBP23.07■■□□□ 1.28
CYTH3-206ENST00000478541 ZNF772Q68DY9 489 aaPredicted RBP23.07■■□□□ 1.28
CYTH3-206ENST00000478541 XPCQ01831 940 aaPredicted RBP23.05■■□□□ 1.28
CYTH3-206ENST00000478541 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
CYTH3-206ENST00000478541 SPATA31A3Q5VYP0 1347 aa23.04■■□□□ 1.28
CYTH3-206ENST00000478541 MARF1Q9Y4F3 1742 aaKnown RBP23.03■■□□□ 1.28
CYTH3-206ENST00000478541 KRT28Q7Z3Y7 464 aa23.03■■□□□ 1.28
CYTH3-206ENST00000478541 PRR36Q9H6K5 1346 aa23.03■■□□□ 1.28
CYTH3-206ENST00000478541 PSME1Q06323 249 aa23.01■■□□□ 1.27
CYTH3-206ENST00000478541 AFF2P51816 1311 aa23.01■■□□□ 1.27
CYTH3-206ENST00000478541 SBNO1A3KN83 1393 aa23.01■■□□□ 1.27
CYTH3-206ENST00000478541 TNS3Q68CZ2 1445 aa23■■□□□ 1.27
CYTH3-206ENST00000478541 ATP7BP35670 1465 aa23■■□□□ 1.27
CYTH3-206ENST00000478541 PMFBP1Q8TBY8 1022 aa22.99■■□□□ 1.27
CYTH3-206ENST00000478541 C8orf37Q96NL8 207 aa22.99■■□□□ 1.27
CYTH3-206ENST00000478541 QRICH2Q9H0J4 1663 aa22.99■■□□□ 1.27
CYTH3-206ENST00000478541 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
CYTH3-206ENST00000478541 TOPAZ1Q8N9V7 1692 aa22.98■■□□□ 1.27
CYTH3-206ENST00000478541 ADAMTS2O95450 1211 aa22.98■■□□□ 1.27
CYTH3-206ENST00000478541 CENPJQ9HC77 1338 aaPredicted RBP22.97■■□□□ 1.27
CYTH3-206ENST00000478541 CDK19Q9BWU1 502 aa22.96■■□□□ 1.27
CYTH3-206ENST00000478541 NUDT16Q96DE0 195 aaKnown RBP22.95■■□□□ 1.26
CYTH3-206ENST00000478541 NGLY1Q96IV0 654 aa22.95■■□□□ 1.26
CYTH3-206ENST00000478541 ALS2Q96Q42 1657 aa22.94■■□□□ 1.26
CYTH3-206ENST00000478541 ARHGEF10O15013 1369 aa22.94■■□□□ 1.26
CYTH3-206ENST00000478541 ROCK2O75116 1388 aaKnown RBP22.94■■□□□ 1.26
CYTH3-206ENST00000478541 TONSLQ96HA7 1378 aa22.94■■□□□ 1.26
CYTH3-206ENST00000478541 ABCA3Q99758 1704 aa22.94■■□□□ 1.26
CYTH3-206ENST00000478541 GPRASP1Q5JY77 1395 aa22.93■■□□□ 1.26
CYTH3-206ENST00000478541 FNBP4Q8N3X1 1017 aaPredicted RBP22.93■■□□□ 1.26
CYTH3-206ENST00000478541 NBPF8Q3BBV2 869 aa22.92■■□□□ 1.26
CYTH3-206ENST00000478541 CDK12Q9NYV4 1490 aaPredicted RBP22.92■■□□□ 1.26
CYTH3-206ENST00000478541 RXRBP28702 533 aa22.91■■□□□ 1.26
CYTH3-206ENST00000478541 NGDNQ8NEJ9 315 aaKnown RBP22.9■■□□□ 1.26
CYTH3-206ENST00000478541 CCDC61Q9Y6R9 512 aa22.9■■□□□ 1.26
CYTH3-206ENST00000478541 QTRT2Q9H974 415 aaKnown RBP22.89■■□□□ 1.25
CYTH3-206ENST00000478541 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
CYTH3-206ENST00000478541 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
CYTH3-206ENST00000478541 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
CYTH3-206ENST00000478541 USP21Q9UK80 565 aa22.88■■□□□ 1.25
CYTH3-206ENST00000478541 PLEKHG3A1L390 1219 aa22.87■■□□□ 1.25
CYTH3-206ENST00000478541 CRYBG1Q9Y4K1 1723 aa22.86■■□□□ 1.25
CYTH3-206ENST00000478541 RBM6P78332 1123 aaKnown RBP22.86■■□□□ 1.25
CYTH3-206ENST00000478541 BCL9LQ86UU0 1499 aa22.85■■□□□ 1.25
CYTH3-206ENST00000478541 SRPK2P78362 688 aaKnown RBP22.85■■□□□ 1.25
CYTH3-206ENST00000478541 LMOD2Q6P5Q4 547 aa22.85■■□□□ 1.25
CYTH3-206ENST00000478541 ATRNO75882 1429 aa22.84■■□□□ 1.25
CYTH3-206ENST00000478541 SLIT2O94813 1529 aa22.84■■□□□ 1.25
CYTH3-206ENST00000478541 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
CYTH3-206ENST00000478541 ACEP12821 1306 aa22.83■■□□□ 1.25
CYTH3-206ENST00000478541 CABLES1Q8TDN4 633 aa22.83■■□□□ 1.25
CYTH3-206ENST00000478541 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms