RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-204ENST00000478420 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-204ENST00000478420 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
SMARCA1-204ENST00000478420 MTMR2Q13614 643 aa8.31□□□□□ -1.08
SMARCA1-204ENST00000478420 QPCTQ16769 361 aa8.31□□□□□ -1.08
SMARCA1-204ENST00000478420 MTRQ99707 1265 aa8.31□□□□□ -1.08
SMARCA1-204ENST00000478420 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 LILRB3O75022 631 aa8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 HRCP23327 699 aa8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 IL21Q9HBE4 155 aa8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 SALL2Q9Y467 1007 aaPredicted RBP8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
SMARCA1-204ENST00000478420 FMNL1O95466 1100 aaPredicted RBP8.29□□□□□ -1.08
SMARCA1-204ENST00000478420 TJAP1Q5JTD0 557 aa8.29□□□□□ -1.08
SMARCA1-204ENST00000478420 PPP2R2DQ66LE6 453 aa8.29□□□□□ -1.08
SMARCA1-204ENST00000478420 ZPR1O75312 459 aa8.28□□□□□ -1.08
SMARCA1-204ENST00000478420 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
SMARCA1-204ENST00000478420 RNF19BQ6ZMZ0 732 aa8.28□□□□□ -1.08
SMARCA1-204ENST00000478420 RETREG3Q86VR2 466 aa8.28□□□□□ -1.08
SMARCA1-204ENST00000478420 SYMPKQ92797 1274 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-204ENST00000478420 RFC5P40937 340 aa8.27□□□□□ -1.09
SMARCA1-204ENST00000478420 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
SMARCA1-204ENST00000478420 THAP11Q96EK4 314 aa8.27□□□□□ -1.09
SMARCA1-204ENST00000478420 SPSB2Q99619 263 aa8.27□□□□□ -1.09
SMARCA1-204ENST00000478420 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
SMARCA1-204ENST00000478420 ZNF516Q92618 1163 aa8.26□□□□□ -1.09
SMARCA1-204ENST00000478420 KCNC4Q03721 635 aa8.25□□□□□ -1.09
SMARCA1-204ENST00000478420 TMEM259Q4ZIN3 620 aa8.25□□□□□ -1.09
SMARCA1-204ENST00000478420 FBXO31Q5XUX0 539 aaPredicted RBP8.25□□□□□ -1.09
SMARCA1-204ENST00000478420 PRR7Q8TB68 274 aa8.25□□□□□ -1.09
SMARCA1-204ENST00000478420 TLL1O43897 1013 aa8.24□□□□□ -1.09
SMARCA1-204ENST00000478420 ITGBL1O95965 494 aaPredicted RBP8.24□□□□□ -1.09
SMARCA1-204ENST00000478420 ADH1BP00325 375 aa8.24□□□□□ -1.09
SMARCA1-204ENST00000478420 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
SMARCA1-204ENST00000478420 TSC1Q92574 1164 aa8.24□□□□□ -1.09
SMARCA1-204ENST00000478420 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
SMARCA1-204ENST00000478420 AP1G2O75843 785 aa8.22□□□□□ -1.09
SMARCA1-204ENST00000478420 MSS51Q4VC12 460 aa8.22□□□□□ -1.09
SMARCA1-204ENST00000478420 FAM160A2Q8N612 972 aaPredicted RBP8.21□□□□□ -1.1
SMARCA1-204ENST00000478420 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
SMARCA1-204ENST00000478420 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
SMARCA1-204ENST00000478420 NKX2-3Q8TAU0 364 aa8.2□□□□□ -1.1
SMARCA1-204ENST00000478420 SLC6A16Q9GZN6 736 aa8.2□□□□□ -1.1
SMARCA1-204ENST00000478420 JUNDP17535 347 aa8.19□□□□□ -1.1
SMARCA1-204ENST00000478420 FLIIQ13045 1269 aa8.19□□□□□ -1.1
SMARCA1-204ENST00000478420 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
SMARCA1-204ENST00000478420 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
SMARCA1-204ENST00000478420 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
SMARCA1-204ENST00000478420 MMP16P51512 607 aa8.17□□□□□ -1.1
SMARCA1-204ENST00000478420 PRDM9Q9NQV7 894 aa8.17□□□□□ -1.1
SMARCA1-204ENST00000478420 S1PR4O95977 384 aa8.16□□□□□ -1.1
SMARCA1-204ENST00000478420 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
SMARCA1-204ENST00000478420 PER1O15534 1290 aaPredicted RBP8.15□□□□□ -1.1
SMARCA1-204ENST00000478420 GGCXP38435 758 aa8.15□□□□□ -1.1
SMARCA1-204ENST00000478420 MCM6Q14566 821 aa8.15□□□□□ -1.1
SMARCA1-204ENST00000478420 PTPRNQ16849 979 aa8.15□□□□□ -1.1
SMARCA1-204ENST00000478420 PLA2G2EQ9NZK7 142 aa8.15□□□□□ -1.1
SMARCA1-204ENST00000478420 APBB1O00213 710 aa8.14□□□□□ -1.11
SMARCA1-204ENST00000478420 IFFO2Q5TF58 517 aa8.14□□□□□ -1.11
SMARCA1-204ENST00000478420 LRRN4Q8WUT4 740 aa8.14□□□□□ -1.11
SMARCA1-204ENST00000478420 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
SMARCA1-204ENST00000478420 CCNYL3P0C7X3 344 aa8.13□□□□□ -1.11
SMARCA1-204ENST00000478420 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
SMARCA1-204ENST00000478420 SOCS7O14512 581 aa8.12□□□□□ -1.11
SMARCA1-204ENST00000478420 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
SMARCA1-204ENST00000478420 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
SMARCA1-204ENST00000478420 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
SMARCA1-204ENST00000478420 CCDC24Q8N4L8 307 aa8.11□□□□□ -1.11
SMARCA1-204ENST00000478420 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-204ENST00000478420 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-204ENST00000478420 RNF223E7ERA6 249 aa8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 CTHP32929 405 aa8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 C14orf37Q86TY3 774 aa8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
SMARCA1-204ENST00000478420 PPEF1O14829 653 aaPredicted RBP8.09□□□□□ -1.11
SMARCA1-204ENST00000478420 F12P00748 615 aaPredicted RBP8.09□□□□□ -1.11
SMARCA1-204ENST00000478420 ANKLE1Q8NAG6 615 aa8.09□□□□□ -1.11
SMARCA1-204ENST00000478420 KCNH2Q12809 1159 aa8.08□□□□□ -1.12
SMARCA1-204ENST00000478420 NR6A1Q15406 480 aa8.08□□□□□ -1.12
SMARCA1-204ENST00000478420 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
SMARCA1-204ENST00000478420 RAD21O60216 631 aa8.07□□□□□ -1.12
SMARCA1-204ENST00000478420 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
SMARCA1-204ENST00000478420 GJD4Q96KN9 370 aaPredicted RBP8.07□□□□□ -1.12
SMARCA1-204ENST00000478420 TRIM34Q9BYJ4 488 aa8.07□□□□□ -1.12
SMARCA1-204ENST00000478420 EPS8L1Q8TE68 723 aa8.06□□□□□ -1.12
SMARCA1-204ENST00000478420 NDUFB9Q9Y6M9 179 aa8.06□□□□□ -1.12
SMARCA1-204ENST00000478420 ZBTB24O43167 697 aaPredicted RBP8.05□□□□□ -1.12
SMARCA1-204ENST00000478420 ARMC2Q8NEN0 867 aa8.05□□□□□ -1.12
SMARCA1-204ENST00000478420 A0A0G2JS52 829 aa8.04□□□□□ -1.12
SMARCA1-204ENST00000478420 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-204ENST00000478420 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
SMARCA1-204ENST00000478420 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
SMARCA1-204ENST00000478420 TBC1D2BQ9UPU7 963 aa8.04□□□□□ -1.12
SMARCA1-204ENST00000478420 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
SMARCA1-204ENST00000478420 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
SMARCA1-204ENST00000478420 FKBPLQ9UIM3 349 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms