RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 PRDM9Q9NQV7 894 aa9.57□□□□□ -0.88
RPS27A-208ENST00000478196 WFS1O76024 890 aa9.55□□□□□ -0.88
RPS27A-208ENST00000478196 Q3C1V9 767 aa9.55□□□□□ -0.88
RPS27A-208ENST00000478196 WNT7AO00755 349 aa9.54□□□□□ -0.88
RPS27A-208ENST00000478196 RNF19BQ6ZMZ0 732 aa9.54□□□□□ -0.88
RPS27A-208ENST00000478196 PHOX2BQ99453 314 aa9.54□□□□□ -0.88
RPS27A-208ENST00000478196 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
RPS27A-208ENST00000478196 MMP16P51512 607 aa9.51□□□□□ -0.89
RPS27A-208ENST00000478196 TRIM32Q13049 653 aa9.51□□□□□ -0.89
RPS27A-208ENST00000478196 SMPD1P17405 629 aa9.5□□□□□ -0.89
RPS27A-208ENST00000478196 GPIHBP1Q8IV16 184 aa9.49□□□□□ -0.89
RPS27A-208ENST00000478196 NFX1Q12986 1120 aaKnown RBP9.48□□□□□ -0.89
RPS27A-208ENST00000478196 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
RPS27A-208ENST00000478196 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
RPS27A-208ENST00000478196 REPIN1Q9BWE0 567 aaKnown RBP9.48□□□□□ -0.89
RPS27A-208ENST00000478196 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
RPS27A-208ENST00000478196 CD46P15529 392 aa9.47□□□□□ -0.89
RPS27A-208ENST00000478196 SENP2Q9HC62 589 aa9.47□□□□□ -0.89
RPS27A-208ENST00000478196 WIPF1O43516 503 aa9.46□□□□□ -0.9
RPS27A-208ENST00000478196 KDM4AO75164 1064 aa9.46□□□□□ -0.9
RPS27A-208ENST00000478196 DXOO77932 396 aaKnown RBP9.46□□□□□ -0.9
RPS27A-208ENST00000478196 STK17AQ9UEE5 414 aa9.46□□□□□ -0.9
RPS27A-208ENST00000478196 J3QL48 77 aa9.45□□□□□ -0.9
RPS27A-208ENST00000478196 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
RPS27A-208ENST00000478196 USP46P62068 366 aa9.44□□□□□ -0.9
RPS27A-208ENST00000478196 TRIM47Q96LD4 638 aa9.44□□□□□ -0.9
RPS27A-208ENST00000478196 SNRPBP14678 240 aaKnown RBP9.42□□□□□ -0.9
RPS27A-208ENST00000478196 WNT7BP56706 349 aa9.42□□□□□ -0.9
RPS27A-208ENST00000478196 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
RPS27A-208ENST00000478196 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
RPS27A-208ENST00000478196 TERTO14746 1132 aaKnown RBP9.41□□□□□ -0.9
RPS27A-208ENST00000478196 MAP2K5Q13163 448 aa9.41□□□□□ -0.9
RPS27A-208ENST00000478196 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
RPS27A-208ENST00000478196 HPS1Q92902 700 aa9.41□□□□□ -0.9
RPS27A-208ENST00000478196 PLCB2Q00722 1185 aa9.39□□□□□ -0.91
RPS27A-208ENST00000478196 SKOR1P84550 965 aa9.38□□□□□ -0.91
RPS27A-208ENST00000478196 IRF6O14896 467 aa9.37□□□□□ -0.91
RPS27A-208ENST00000478196 HOXA2O43364 376 aa9.37□□□□□ -0.91
RPS27A-208ENST00000478196 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
RPS27A-208ENST00000478196 HLA-CQ95604 372 aa9.36□□□□□ -0.91
RPS27A-208ENST00000478196 MINK1Q8N4C8 1332 aaPredicted RBP9.35□□□□□ -0.91
RPS27A-208ENST00000478196 JUNDP17535 347 aa9.35□□□□□ -0.91
RPS27A-208ENST00000478196 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
RPS27A-208ENST00000478196 TULP1O00294 542 aaPredicted RBP9.33□□□□□ -0.92
RPS27A-208ENST00000478196 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
RPS27A-208ENST00000478196 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
RPS27A-208ENST00000478196 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
RPS27A-208ENST00000478196 RETREG3Q86VR2 466 aa9.31□□□□□ -0.92
RPS27A-208ENST00000478196 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
RPS27A-208ENST00000478196 NUDT12Q9BQG2 462 aa9.31□□□□□ -0.92
RPS27A-208ENST00000478196 CLCN1P35523 988 aa9.3□□□□□ -0.92
RPS27A-208ENST00000478196 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
RPS27A-208ENST00000478196 SYMPKQ92797 1274 aaKnown RBP9.3□□□□□ -0.92
RPS27A-208ENST00000478196 GPCPD1Q9NPB8 672 aa9.3□□□□□ -0.92
RPS27A-208ENST00000478196 SIAH2O43255 324 aa9.29□□□□□ -0.92
RPS27A-208ENST00000478196 NXF1Q9UBU9 619 aaKnown RBP9.29□□□□□ -0.92
RPS27A-208ENST00000478196 WASF2Q9Y6W5 498 aa9.29□□□□□ -0.92
RPS27A-208ENST00000478196 CAPN5O15484 640 aaPredicted RBP9.28□□□□□ -0.92
RPS27A-208ENST00000478196 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
RPS27A-208ENST00000478196 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
RPS27A-208ENST00000478196 FAM181BA6NEQ2 426 aa9.27□□□□□ -0.93
RPS27A-208ENST00000478196 NPAS3Q8IXF0 933 aa9.27□□□□□ -0.93
RPS27A-208ENST00000478196 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
RPS27A-208ENST00000478196 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
RPS27A-208ENST00000478196 FDX1P10109 184 aa9.25□□□□□ -0.93
RPS27A-208ENST00000478196 MS4A1P11836 297 aa9.25□□□□□ -0.93
RPS27A-208ENST00000478196 TRIM46Q7Z4K8 759 aa9.25□□□□□ -0.93
RPS27A-208ENST00000478196 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
RPS27A-208ENST00000478196 CCNYL3P0C7X3 344 aa9.24□□□□□ -0.93
RPS27A-208ENST00000478196 BMP1P13497 986 aa9.24□□□□□ -0.93
RPS27A-208ENST00000478196 SH3BP2P78314 561 aa9.24□□□□□ -0.93
RPS27A-208ENST00000478196 IRF7Q92985 503 aa9.24□□□□□ -0.93
RPS27A-208ENST00000478196 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
RPS27A-208ENST00000478196 GMPRP36959 345 aa9.22□□□□□ -0.93
RPS27A-208ENST00000478196 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
RPS27A-208ENST00000478196 PTPRNQ16849 979 aa9.21□□□□□ -0.94
RPS27A-208ENST00000478196 EVA1BQ9NVM1 165 aa9.21□□□□□ -0.94
RPS27A-208ENST00000478196 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.94
RPS27A-208ENST00000478196 PLEKHG3A1L390 1219 aa9.2□□□□□ -0.94
RPS27A-208ENST00000478196 ZSCAN1Q8NBB4 408 aa9.2□□□□□ -0.94
RPS27A-208ENST00000478196 UNC93B1Q9H1C4 597 aa9.2□□□□□ -0.94
RPS27A-208ENST00000478196 H3BM21 787 aa9.19□□□□□ -0.94
RPS27A-208ENST00000478196 VARSP26640 1264 aaKnown RBP9.18□□□□□ -0.94
RPS27A-208ENST00000478196 KCNH2Q12809 1159 aa9.18□□□□□ -0.94
RPS27A-208ENST00000478196 MPNDQ8N594 471 aa9.18□□□□□ -0.94
RPS27A-208ENST00000478196 BAP1Q92560 729 aa9.18□□□□□ -0.94
RPS27A-208ENST00000478196 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
RPS27A-208ENST00000478196 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
RPS27A-208ENST00000478196 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
RPS27A-208ENST00000478196 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
RPS27A-208ENST00000478196 VEGFBP49765 207 aa9.16□□□□□ -0.94
RPS27A-208ENST00000478196 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
RPS27A-208ENST00000478196 DESI1Q6ICB0 168 aa9.16□□□□□ -0.94
RPS27A-208ENST00000478196 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
RPS27A-208ENST00000478196 TLL2Q9Y6L7 1015 aa9.16□□□□□ -0.94
RPS27A-208ENST00000478196 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
RPS27A-208ENST00000478196 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
RPS27A-208ENST00000478196 NDUFV2P19404 249 aa9.14□□□□□ -0.95
RPS27A-208ENST00000478196 NNTQ13423 1086 aa9.14□□□□□ -0.95
RPS27A-208ENST00000478196 SCARF1Q14162 830 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms