RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 YTHDC2Q9H6S0 1430 aaKnown RBP14.8□□□□□ -0.04
HDAC6-222ENST00000478095 NCOA3Q9Y6Q9 1424 aa14.79□□□□□ -0.04
HDAC6-222ENST00000478095 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
HDAC6-222ENST00000478095 WAPLQ7Z5K2 1190 aa14.78□□□□□ -0.04
HDAC6-222ENST00000478095 CCER1Q8TC90 406 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-222ENST00000478095 XIRP1Q702N8 1843 aaKnown RBP14.78□□□□□ -0.04
HDAC6-222ENST00000478095 LAMC1P11047 1609 aa14.77□□□□□ -0.04
HDAC6-222ENST00000478095 ADGRB1O14514 1584 aa14.77□□□□□ -0.04
HDAC6-222ENST00000478095 TECPR2O15040 1411 aa14.77□□□□□ -0.04
HDAC6-222ENST00000478095 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
HDAC6-222ENST00000478095 C19orf44Q9H6X5 657 aa14.77□□□□□ -0.05
HDAC6-222ENST00000478095 TRAK1Q9UPV9 953 aa14.77□□□□□ -0.05
HDAC6-222ENST00000478095 NBPF1Q3BBV0 1214 aa14.76□□□□□ -0.05
HDAC6-222ENST00000478095 ADGRL3Q9HAR2 1447 aa14.75□□□□□ -0.05
HDAC6-222ENST00000478095 ATF3P18847 181 aa14.75□□□□□ -0.05
HDAC6-222ENST00000478095 SAFB2Q14151 953 aaKnown RBP eCLIP14.75□□□□□ -0.05
HDAC6-222ENST00000478095 CADPS2Q86UW7 1296 aa14.74□□□□□ -0.05
HDAC6-222ENST00000478095 PRAM1Q96QH2 718 aa14.74□□□□□ -0.05
HDAC6-222ENST00000478095 NBPF8Q3BBV2 869 aa14.73□□□□□ -0.05
HDAC6-222ENST00000478095 SLAIN2Q9P270 581 aa14.73□□□□□ -0.05
HDAC6-222ENST00000478095 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
HDAC6-222ENST00000478095 FAM135BQ49AJ0 1406 aa14.72□□□□□ -0.05
HDAC6-222ENST00000478095 POGKQ9P215 609 aa14.71□□□□□ -0.05
HDAC6-222ENST00000478095 DCCP43146 1447 aa14.71□□□□□ -0.05
HDAC6-222ENST00000478095 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
HDAC6-222ENST00000478095 NALCNQ8IZF0 1738 aa14.7□□□□□ -0.06
HDAC6-222ENST00000478095 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-222ENST00000478095 DSG3P32926 999 aa14.7□□□□□ -0.06
HDAC6-222ENST00000478095 HSPA1LP34931 641 aa14.7□□□□□ -0.06
HDAC6-222ENST00000478095 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
HDAC6-222ENST00000478095 MST1RQ04912 1400 aa14.69□□□□□ -0.06
HDAC6-222ENST00000478095 DLC1Q96QB1 1528 aa14.69□□□□□ -0.06
HDAC6-222ENST00000478095 ROCK2O75116 1388 aaKnown RBP14.69□□□□□ -0.06
HDAC6-222ENST00000478095 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
HDAC6-222ENST00000478095 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-222ENST00000478095 MINK1Q8N4C8 1332 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-222ENST00000478095 BRINP3Q76B58 766 aa14.66□□□□□ -0.06
HDAC6-222ENST00000478095 KIAA1210Q9ULL0 1709 aa14.66□□□□□ -0.06
HDAC6-222ENST00000478095 CDC42BPGQ6DT37 1551 aa14.65□□□□□ -0.06
HDAC6-222ENST00000478095 C1orf167Q5SNV9 1468 aa14.65□□□□□ -0.06
HDAC6-222ENST00000478095 ROBO1Q9Y6N7 1651 aa14.65□□□□□ -0.06
HDAC6-222ENST00000478095 TRPM1Q7Z4N2 1603 aa14.64□□□□□ -0.07
HDAC6-222ENST00000478095 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
HDAC6-222ENST00000478095 CARD11Q9BXL7 1154 aa14.63□□□□□ -0.07
HDAC6-222ENST00000478095 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
HDAC6-222ENST00000478095 GPRASP1Q5JY77 1395 aa14.62□□□□□ -0.07
HDAC6-222ENST00000478095 ABCB7O75027 752 aa14.62□□□□□ -0.07
HDAC6-222ENST00000478095 DDX17Q92841 729 aaKnown RBP14.62□□□□□ -0.07
HDAC6-222ENST00000478095 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
HDAC6-222ENST00000478095 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-222ENST00000478095 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
HDAC6-222ENST00000478095 ESCO1Q5FWF5 840 aa14.61□□□□□ -0.07
HDAC6-222ENST00000478095 ARHGEF28Q8N1W1 1705 aaKnown RBP14.61□□□□□ -0.07
HDAC6-222ENST00000478095 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-222ENST00000478095 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-222ENST00000478095 ADGRB2O60241 1585 aa14.58□□□□□ -0.08
HDAC6-222ENST00000478095 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
HDAC6-222ENST00000478095 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
HDAC6-222ENST00000478095 FMN2Q9NZ56 1722 aa14.56□□□□□ -0.08
HDAC6-222ENST00000478095 CDK19Q9BWU1 502 aa14.56□□□□□ -0.08
HDAC6-222ENST00000478095 FOXO3O43524 673 aa14.55□□□□□ -0.08
HDAC6-222ENST00000478095 XPCQ01831 940 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-222ENST00000478095 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
HDAC6-222ENST00000478095 AHDC1Q5TGY3 1603 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-222ENST00000478095 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
HDAC6-222ENST00000478095 PMFBP1Q8TBY8 1022 aa14.54□□□□□ -0.08
HDAC6-222ENST00000478095 PHF8Q9UPP1 1060 aa14.54□□□□□ -0.08
HDAC6-222ENST00000478095 TULP4Q9NRJ4 1543 aa14.54□□□□□ -0.08
HDAC6-222ENST00000478095 PHLPP1O60346 1717 aa14.53□□□□□ -0.08
HDAC6-222ENST00000478095 NUDT16Q96DE0 195 aaKnown RBP14.53□□□□□ -0.08
HDAC6-222ENST00000478095 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
HDAC6-222ENST00000478095 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.08
HDAC6-222ENST00000478095 ATP7BP35670 1465 aa14.52□□□□□ -0.08
HDAC6-222ENST00000478095 NPHP3Q7Z494 1330 aa14.52□□□□□ -0.08
HDAC6-222ENST00000478095 USP32Q8NFA0 1604 aa14.52□□□□□ -0.09
HDAC6-222ENST00000478095 USP47Q96K76 1375 aa14.51□□□□□ -0.09
HDAC6-222ENST00000478095 JCADQ9P266 1359 aa14.51□□□□□ -0.09
HDAC6-222ENST00000478095 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
HDAC6-222ENST00000478095 POLA2Q14181 598 aa14.51□□□□□ -0.09
HDAC6-222ENST00000478095 QRICH2Q9H0J4 1663 aa14.51□□□□□ -0.09
HDAC6-222ENST00000478095 SOS2Q07890 1332 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-222ENST00000478095 EVC2Q86UK5 1308 aa14.5□□□□□ -0.09
HDAC6-222ENST00000478095 NHSL1Q5SYE7 1610 aa14.49□□□□□ -0.09
HDAC6-222ENST00000478095 LRRC59Q96AG4 307 aaKnown RBP14.49□□□□□ -0.09
HDAC6-222ENST00000478095 KRT28Q7Z3Y7 464 aa14.48□□□□□ -0.09
HDAC6-222ENST00000478095 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
HDAC6-222ENST00000478095 PXDNQ92626 1479 aa14.48□□□□□ -0.09
HDAC6-222ENST00000478095 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
HDAC6-222ENST00000478095 PSME1Q06323 249 aa14.47□□□□□ -0.09
HDAC6-222ENST00000478095 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
HDAC6-222ENST00000478095 PNPLA6Q8IY17 1366 aa14.47□□□□□ -0.09
HDAC6-222ENST00000478095 KIF1AQ12756 1690 aa14.46□□□□□ -0.09
HDAC6-222ENST00000478095 TESK2Q96S53 571 aa14.46□□□□□ -0.09
HDAC6-222ENST00000478095 PPIP5K1Q6PFW1 1433 aa14.46□□□□□ -0.09
HDAC6-222ENST00000478095 NUTM2BA6NNL0 878 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-222ENST00000478095 NUTM2EB1AL46 878 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-222ENST00000478095 NUTM2AQ8IVF1 878 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-222ENST00000478095 CABP1Q9NZU7 370 aa14.45□□□□□ -0.1
HDAC6-222ENST00000478095 ACEP12821 1306 aa14.44□□□□□ -0.1
HDAC6-222ENST00000478095 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms