RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
PTPN7-209ENST00000477554 ORAI2Q96SN7 254 aa25.71■■□□□ 1.71
PTPN7-209ENST00000477554 SAFB2Q14151 953 aaKnown RBP eCLIP25.71■■□□□ 1.71
PTPN7-209ENST00000477554 NHSL1Q5SYE7 1610 aa25.7■■□□□ 1.7
PTPN7-209ENST00000477554 NUTM2FA1L443 756 aa25.7■■□□□ 1.7
PTPN7-209ENST00000477554 CDC42BPGQ6DT37 1551 aa25.69■■□□□ 1.7
PTPN7-209ENST00000477554 NEUROD1Q13562 356 aa25.68■■□□□ 1.7
PTPN7-209ENST00000477554 PRAM1Q96QH2 718 aa25.67■■□□□ 1.7
PTPN7-209ENST00000477554 TRAK1Q9UPV9 953 aa25.67■■□□□ 1.7
PTPN7-209ENST00000477554 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
PTPN7-209ENST00000477554 NBPF1Q3BBV0 1214 aa25.63■■□□□ 1.69
PTPN7-209ENST00000477554 FMN2Q9NZ56 1722 aa25.63■■□□□ 1.69
PTPN7-209ENST00000477554 DLC1Q96QB1 1528 aa25.63■■□□□ 1.69
PTPN7-209ENST00000477554 RGPD8O14715 1765 aaPredicted RBP25.62■■□□□ 1.69
PTPN7-209ENST00000477554 LRP6O75581 1613 aa25.62■■□□□ 1.69
PTPN7-209ENST00000477554 JCADQ9P266 1359 aa25.61■■□□□ 1.69
PTPN7-209ENST00000477554 SIRT1Q96EB6 747 aa25.61■■□□□ 1.69
PTPN7-209ENST00000477554 RGS17Q9UGC6 210 aaPredicted RBP25.61■■□□□ 1.69
PTPN7-209ENST00000477554 ARHGEF28Q8N1W1 1705 aaKnown RBP25.61■■□□□ 1.69
PTPN7-209ENST00000477554 HIRIP3Q9BW71 556 aaPredicted RBP25.59■■□□□ 1.69
PTPN7-209ENST00000477554 SHPRHQ149N8 1683 aa25.58■■□□□ 1.69
PTPN7-209ENST00000477554 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
PTPN7-209ENST00000477554 STAC3Q96MF2 364 aa25.56■■□□□ 1.68
PTPN7-209ENST00000477554 POGKQ9P215 609 aa25.56■■□□□ 1.68
PTPN7-209ENST00000477554 USP32Q8NFA0 1604 aa25.56■■□□□ 1.68
PTPN7-209ENST00000477554 KIAA1210Q9ULL0 1709 aa25.56■■□□□ 1.68
PTPN7-209ENST00000477554 XPCQ01831 940 aaPredicted RBP25.55■■□□□ 1.68
PTPN7-209ENST00000477554 MINK1Q8N4C8 1332 aaPredicted RBP25.55■■□□□ 1.68
PTPN7-209ENST00000477554 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
PTPN7-209ENST00000477554 ADGRB2O60241 1585 aa25.52■■□□□ 1.68
PTPN7-209ENST00000477554 SOS2Q07890 1332 aaPredicted RBP25.51■■□□□ 1.67
PTPN7-209ENST00000477554 FOXO3O43524 673 aa25.51■■□□□ 1.67
PTPN7-209ENST00000477554 PXDNQ92626 1479 aa25.51■■□□□ 1.67
PTPN7-209ENST00000477554 PNPLA6Q8IY17 1366 aa25.5■■□□□ 1.67
PTPN7-209ENST00000477554 NUTM2BA6NNL0 878 aaPredicted RBP25.49■■□□□ 1.67
PTPN7-209ENST00000477554 NUTM2EB1AL46 878 aaPredicted RBP25.49■■□□□ 1.67
PTPN7-209ENST00000477554 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
PTPN7-209ENST00000477554 NUTM2AQ8IVF1 878 aaPredicted RBP25.49■■□□□ 1.67
PTPN7-209ENST00000477554 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
PTPN7-209ENST00000477554 PRR36Q9H6K5 1346 aa25.48■■□□□ 1.67
PTPN7-209ENST00000477554 LRRC59Q96AG4 307 aaKnown RBP25.46■■□□□ 1.67
PTPN7-209ENST00000477554 SPATA31A6Q5VVP1 1343 aa25.45■■□□□ 1.66
PTPN7-209ENST00000477554 POTEAQ6S8J7 498 aa25.45■■□□□ 1.66
PTPN7-209ENST00000477554 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
PTPN7-209ENST00000477554 PMFBP1Q8TBY8 1022 aa25.42■■□□□ 1.66
PTPN7-209ENST00000477554 WASLO00401 505 aaPredicted RBP25.41■■□□□ 1.66
PTPN7-209ENST00000477554 PHF8Q9UPP1 1060 aa25.41■■□□□ 1.66
PTPN7-209ENST00000477554 NPHP3Q7Z494 1330 aa25.41■■□□□ 1.66
PTPN7-209ENST00000477554 TULP4Q9NRJ4 1543 aa25.4■■□□□ 1.66
PTPN7-209ENST00000477554 ANKARQ7Z5J8 1434 aa25.37■■□□□ 1.65
PTPN7-209ENST00000477554 ATP7BP35670 1465 aa25.37■■□□□ 1.65
PTPN7-209ENST00000477554 MEX3CQ5U5Q3 659 aaKnown RBP25.37■■□□□ 1.65
PTPN7-209ENST00000477554 COL22A1Q8NFW1 1626 aaPredicted RBP25.36■■□□□ 1.65
PTPN7-209ENST00000477554 QRICH2Q9H0J4 1663 aa25.36■■□□□ 1.65
PTPN7-209ENST00000477554 KRT28Q7Z3Y7 464 aa25.36■■□□□ 1.65
PTPN7-209ENST00000477554 CDK19Q9BWU1 502 aa25.35■■□□□ 1.65
PTPN7-209ENST00000477554 ROCK2O75116 1388 aaKnown RBP25.35■■□□□ 1.65
PTPN7-209ENST00000477554 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
PTPN7-209ENST00000477554 ADAMTS2O95450 1211 aa25.34■■□□□ 1.65
PTPN7-209ENST00000477554 SPATA31A3Q5VYP0 1347 aa25.32■■□□□ 1.64
PTPN7-209ENST00000477554 CENPJQ9HC77 1338 aaPredicted RBP25.32■■□□□ 1.64
PTPN7-209ENST00000477554 PLEKHG5O94827 1062 aa25.32■■□□□ 1.64
PTPN7-209ENST00000477554 NUDT16Q96DE0 195 aaKnown RBP25.31■■□□□ 1.64
PTPN7-209ENST00000477554 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
PTPN7-209ENST00000477554 TRPM3Q9HCF6 1732 aaPredicted RBP25.31■■□□□ 1.64
PTPN7-209ENST00000477554 TOPAZ1Q8N9V7 1692 aa25.31■■□□□ 1.64
PTPN7-209ENST00000477554 SOCS7O14512 581 aa25.29■■□□□ 1.64
PTPN7-209ENST00000477554 AFF2P51816 1311 aa25.29■■□□□ 1.64
PTPN7-209ENST00000477554 TNS3Q68CZ2 1445 aa25.27■■□□□ 1.64
PTPN7-209ENST00000477554 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
PTPN7-209ENST00000477554 PSME1Q06323 249 aa25.27■■□□□ 1.64
PTPN7-209ENST00000477554 CABLES1Q8TDN4 633 aa25.27■■□□□ 1.64
PTPN7-209ENST00000477554 CABP2Q9NPB3 220 aa25.27■■□□□ 1.64
PTPN7-209ENST00000477554 ITSN1Q15811 1721 aa25.26■■□□□ 1.63
PTPN7-209ENST00000477554 RALGAPBQ86X10 1494 aa25.25■■□□□ 1.63
PTPN7-209ENST00000477554 EIF3AQ14152 1382 aaKnown RBP25.24■■□□□ 1.63
PTPN7-209ENST00000477554 ABCA3Q99758 1704 aa25.24■■□□□ 1.63
PTPN7-209ENST00000477554 ALS2Q96Q42 1657 aa25.23■■□□□ 1.63
PTPN7-209ENST00000477554 MARF1Q9Y4F3 1742 aaKnown RBP25.23■■□□□ 1.63
PTPN7-209ENST00000477554 LMOD2Q6P5Q4 547 aa25.22■■□□□ 1.63
PTPN7-209ENST00000477554 SBNO1A3KN83 1393 aa25.22■■□□□ 1.63
PTPN7-209ENST00000477554 NGDNQ8NEJ9 315 aaKnown RBP25.21■■□□□ 1.63
PTPN7-209ENST00000477554 SRPK2P78362 688 aaKnown RBP25.2■■□□□ 1.63
PTPN7-209ENST00000477554 CARD11Q9BXL7 1154 aa25.2■■□□□ 1.63
PTPN7-209ENST00000477554 NGLY1Q96IV0 654 aa25.2■■□□□ 1.62
PTPN7-209ENST00000477554 ACEP12821 1306 aa25.18■■□□□ 1.62
PTPN7-209ENST00000477554 ZNF772Q68DY9 489 aaPredicted RBP25.18■■□□□ 1.62
PTPN7-209ENST00000477554 PPIP5K1Q6PFW1 1433 aa25.17■■□□□ 1.62
PTPN7-209ENST00000477554 CCDC61Q9Y6R9 512 aa25.17■■□□□ 1.62
PTPN7-209ENST00000477554 POLR3AO14802 1390 aaPredicted RBP25.16■■□□□ 1.62
PTPN7-209ENST00000477554 CRYBG1Q9Y4K1 1723 aa25.16■■□□□ 1.62
PTPN7-209ENST00000477554 PLEKHG3A1L390 1219 aa25.14■■□□□ 1.62
PTPN7-209ENST00000477554 PAK3O75914 559 aaPredicted RBP25.14■■□□□ 1.62
PTPN7-209ENST00000477554 BCL9LQ86UU0 1499 aa25.14■■□□□ 1.61
PTPN7-209ENST00000477554 NUTM2GQ5VZR2 741 aa25.13■■□□□ 1.61
PTPN7-209ENST00000477554 FNBP4Q8N3X1 1017 aaPredicted RBP25.12■■□□□ 1.61
PTPN7-209ENST00000477554 QTRT2Q9H974 415 aaKnown RBP25.12■■□□□ 1.61
PTPN7-209ENST00000477554 CABP1Q9NZU7 370 aa25.12■■□□□ 1.61
PTPN7-209ENST00000477554 USP21Q9UK80 565 aa25.12■■□□□ 1.61
PTPN7-209ENST00000477554 ARHGEF10O15013 1369 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms