RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 PSME1Q06323 249 aa21.41■■□□□ 1.02
LPCAT1-202ENST00000475622 WASHC4Q2M389 1173 aa21.4■■□□□ 1.02
LPCAT1-202ENST00000475622 SDF4Q9BRK5 362 aa21.4■■□□□ 1.02
LPCAT1-202ENST00000475622 CCDC39Q9UFE4 941 aa21.39■■□□□ 1.02
LPCAT1-202ENST00000475622 FBXO3Q9UK99 471 aa21.39■■□□□ 1.02
LPCAT1-202ENST00000475622 AK7Q96M32 723 aa21.39■■□□□ 1.01
LPCAT1-202ENST00000475622 ACBD3Q9H3P7 528 aa21.39■■□□□ 1.01
LPCAT1-202ENST00000475622 HSP90B2PQ58FF3 399 aa21.39■■□□□ 1.01
LPCAT1-202ENST00000475622 UBTFL1P0CB47 393 aaPredicted RBP21.38■■□□□ 1.01
LPCAT1-202ENST00000475622 RIC3Q7Z5B4 369 aa21.38■■□□□ 1.01
LPCAT1-202ENST00000475622 CCDC43Q96MW1 224 aaKnown RBP21.38■■□□□ 1.01
LPCAT1-202ENST00000475622 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
LPCAT1-202ENST00000475622 GGNBP2Q9H3C7 697 aa21.38■■□□□ 1.01
LPCAT1-202ENST00000475622 NAT10Q9H0A0 1025 aaKnown RBP21.38■■□□□ 1.01
LPCAT1-202ENST00000475622 CDR1P51861 262 aa21.37■■□□□ 1.01
LPCAT1-202ENST00000475622 OLFM4Q6UX06 510 aa21.37■■□□□ 1.01
LPCAT1-202ENST00000475622 PDILTQ8N807 584 aa21.37■■□□□ 1.01
LPCAT1-202ENST00000475622 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.37■■□□□ 1.01
LPCAT1-202ENST00000475622 TRAK2O60296 914 aa21.36■■□□□ 1.01
LPCAT1-202ENST00000475622 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
LPCAT1-202ENST00000475622 CT47A1Q5JQC4 288 aaPredicted RBP21.35■■□□□ 1.01
LPCAT1-202ENST00000475622 CAVIN1Q6NZI2 390 aaKnown RBP21.35■■□□□ 1.01
LPCAT1-202ENST00000475622 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
LPCAT1-202ENST00000475622 PSMA5P28066 241 aa21.34■■□□□ 1.01
LPCAT1-202ENST00000475622 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
LPCAT1-202ENST00000475622 RRP12Q5JTH9 1297 aaKnown RBP21.34■■□□□ 1.01
LPCAT1-202ENST00000475622 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
LPCAT1-202ENST00000475622 PTPRGP23470 1445 aa21.33■■□□□ 1.01
LPCAT1-202ENST00000475622 FSD1Q9BTV5 496 aa21.33■■□□□ 1.01
LPCAT1-202ENST00000475622 OFD1O75665 1012 aa21.33■■□□□ 1
LPCAT1-202ENST00000475622 TRIM5Q9C035 493 aa21.33■■□□□ 1
LPCAT1-202ENST00000475622 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
LPCAT1-202ENST00000475622 CNTROBQ8N137 903 aa21.32■■□□□ 1
LPCAT1-202ENST00000475622 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
LPCAT1-202ENST00000475622 FYB1O15117 783 aa21.32■■□□□ 1
LPCAT1-202ENST00000475622 SAMD1Q6SPF0 538 aaPredicted RBP21.32■■□□□ 1
LPCAT1-202ENST00000475622 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
LPCAT1-202ENST00000475622 BRMS1Q9HCU9 246 aa21.31■■□□□ 1
LPCAT1-202ENST00000475622 NEK4P51957 841 aa21.31■■□□□ 1
LPCAT1-202ENST00000475622 KDM4AO75164 1064 aa21.31■■□□□ 1
LPCAT1-202ENST00000475622 CLASRPQ8N2M8 674 aaKnown RBP21.3■■□□□ 1
LPCAT1-202ENST00000475622 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
LPCAT1-202ENST00000475622 MBD3O95983 291 aa21.3■■□□□ 1
LPCAT1-202ENST00000475622 SURF6O75683 361 aaKnown RBP21.3■■□□□ 1
LPCAT1-202ENST00000475622 NOM1Q5C9Z4 860 aaKnown RBP21.3■■□□□ 1
LPCAT1-202ENST00000475622 TTLL5Q6EMB2 1281 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 XBP1P17861 261 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 CAGE1Q8TC20 777 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 CABP2Q9NPB3 220 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 PRPF40AO75400 957 aaKnown RBP21.29■■□□□ 1
LPCAT1-202ENST00000475622 MTHFSP49914 203 aa21.29■■□□□ 1
LPCAT1-202ENST00000475622 RBM33Q96EV2 1170 aaKnown RBP21.29■■□□□ 1
LPCAT1-202ENST00000475622 ODF2Q5BJF6 829 aa21.28■■□□□ 1
LPCAT1-202ENST00000475622 EPS15P42566 896 aa21.28■■□□□ 1
LPCAT1-202ENST00000475622 LETM1O95202 739 aaPredicted RBP21.28■■□□□ 1
LPCAT1-202ENST00000475622 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
LPCAT1-202ENST00000475622 KINO60870 393 aaKnown RBP21.27■■□□□ 1
LPCAT1-202ENST00000475622 GNAI3P08754 354 aa21.27■■□□□ 1
LPCAT1-202ENST00000475622 MTMR7Q9Y216 660 aa21.27■■□□□ 1
LPCAT1-202ENST00000475622 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
LPCAT1-202ENST00000475622 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
LPCAT1-202ENST00000475622 MYOM3Q5VTT5 1437 aa21.27■■□□□ 1
LPCAT1-202ENST00000475622 ATP2B1P20020 1258 aa21.27■■□□□ 1
LPCAT1-202ENST00000475622 WIZO95785 1651 aa21.27■■□□□ 1
LPCAT1-202ENST00000475622 NLRP2Q9NX02 1062 aa21.27■□□□□ 0.99
LPCAT1-202ENST00000475622 TSPY26PQ9H489 355 aa21.26■□□□□ 0.99
LPCAT1-202ENST00000475622 SMC2O95347 1197 aa21.26■□□□□ 0.99
LPCAT1-202ENST00000475622 CCDC173Q0VFZ6 552 aa21.26■□□□□ 0.99
LPCAT1-202ENST00000475622 MTERF4Q7Z6M4 381 aaKnown RBP21.26■□□□□ 0.99
LPCAT1-202ENST00000475622 NUTM2GQ5VZR2 741 aa21.26■□□□□ 0.99
LPCAT1-202ENST00000475622 STAC3Q96MF2 364 aa21.25■□□□□ 0.99
LPCAT1-202ENST00000475622 MAP7D2Q96T17 732 aa21.25■□□□□ 0.99
LPCAT1-202ENST00000475622 ZFYVE27Q5T4F4 411 aa21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 FIBPO43427 364 aa21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 PDCP20941 246 aa21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 RABEP1Q15276 862 aa21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 DNAJC2Q99543 621 aaKnown RBP21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 TMEM132EQ6IEE7 984 aa21.24■□□□□ 0.99
LPCAT1-202ENST00000475622 MCM2P49736 904 aa21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 EXOSC9Q06265 439 aaKnown RBP21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 BRPF3Q9ULD4 1205 aa21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 WASHC2AQ641Q2 1341 aa21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 SART3Q15020 963 aaKnown RBP21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 CCDC30Q5VVM6 783 aa21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 ERCC4Q92889 916 aaPredicted RBP21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
LPCAT1-202ENST00000475622 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
LPCAT1-202ENST00000475622 CNKSR2Q8WXI2 1034 aa21.22■□□□□ 0.99
LPCAT1-202ENST00000475622 NLRP6P59044 892 aa21.22■□□□□ 0.99
LPCAT1-202ENST00000475622 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
LPCAT1-202ENST00000475622 H0YHG0 523 aa21.21■□□□□ 0.99
LPCAT1-202ENST00000475622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.2■□□□□ 0.983e-10■■■■■ 153.8
LPCAT1-202ENST00000475622 CEBPZQ03701 1054 aaKnown RBP21.2■□□□□ 0.98
LPCAT1-202ENST00000475622 PPP2R1AP30153 589 aa21.19■□□□□ 0.98
LPCAT1-202ENST00000475622 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
LPCAT1-202ENST00000475622 FILIP1LQ4L180 1135 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms