RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 TRAK1Q9UPV9 953 aa23.37■■□□□ 1.33
SRM-204ENST00000475189 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
SRM-204ENST00000475189 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
SRM-204ENST00000475189 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
SRM-204ENST00000475189 CDC42BPGQ6DT37 1551 aa23.34■■□□□ 1.33
SRM-204ENST00000475189 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.32
SRM-204ENST00000475189 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.32
SRM-204ENST00000475189 POGKQ9P215 609 aa23.31■■□□□ 1.32
SRM-204ENST00000475189 C1orf167Q5SNV9 1468 aa23.3■■□□□ 1.32
SRM-204ENST00000475189 SAFB2Q14151 953 aaKnown RBP eCLIP23.3■■□□□ 1.32
SRM-204ENST00000475189 BRINP3Q76B58 766 aa23.3■■□□□ 1.32
SRM-204ENST00000475189 PHLPP1O60346 1717 aa23.29■■□□□ 1.32
SRM-204ENST00000475189 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
SRM-204ENST00000475189 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
SRM-204ENST00000475189 SOCS7O14512 581 aa23.28■■□□□ 1.32
SRM-204ENST00000475189 FMN2Q9NZ56 1722 aa23.28■■□□□ 1.32
SRM-204ENST00000475189 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
SRM-204ENST00000475189 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
SRM-204ENST00000475189 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
SRM-204ENST00000475189 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
SRM-204ENST00000475189 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
SRM-204ENST00000475189 RGPD8O14715 1765 aaPredicted RBP23.22■■□□□ 1.31
SRM-204ENST00000475189 NUTM2FA1L443 756 aa23.22■■□□□ 1.31
SRM-204ENST00000475189 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
SRM-204ENST00000475189 MINK1Q8N4C8 1332 aaPredicted RBP23.22■■□□□ 1.31
SRM-204ENST00000475189 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
SRM-204ENST00000475189 ROCK2O75116 1388 aaKnown RBP23.21■■□□□ 1.31
SRM-204ENST00000475189 GPRASP1Q5JY77 1395 aa23.18■■□□□ 1.3
SRM-204ENST00000475189 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
SRM-204ENST00000475189 DDX17Q92841 729 aaKnown RBP23.18■■□□□ 1.3
SRM-204ENST00000475189 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
SRM-204ENST00000475189 USP32Q8NFA0 1604 aa23.16■■□□□ 1.3
SRM-204ENST00000475189 WASLO00401 505 aaPredicted RBP23.15■■□□□ 1.3
SRM-204ENST00000475189 TIMELESSQ9UNS1 1208 aa23.15■■□□□ 1.3
SRM-204ENST00000475189 CENPJQ9HC77 1338 aaPredicted RBP23.14■■□□□ 1.3
SRM-204ENST00000475189 QRICH2Q9H0J4 1663 aa23.14■■□□□ 1.29
SRM-204ENST00000475189 ANKARQ7Z5J8 1434 aa23.13■■□□□ 1.29
SRM-204ENST00000475189 KIF1AQ12756 1690 aa23.12■■□□□ 1.29
SRM-204ENST00000475189 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
SRM-204ENST00000475189 JCADQ9P266 1359 aa23.12■■□□□ 1.29
SRM-204ENST00000475189 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
SRM-204ENST00000475189 MED1Q15648 1581 aaPredicted RBP23.1■■□□□ 1.29
SRM-204ENST00000475189 EIF3AQ14152 1382 aaKnown RBP23.1■■□□□ 1.29
SRM-204ENST00000475189 SHPRHQ149N8 1683 aa23.09■■□□□ 1.29
SRM-204ENST00000475189 SOS2Q07890 1332 aaPredicted RBP23.09■■□□□ 1.29
SRM-204ENST00000475189 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
SRM-204ENST00000475189 FOXO3O43524 673 aa23.09■■□□□ 1.29
SRM-204ENST00000475189 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
SRM-204ENST00000475189 NPHP3Q7Z494 1330 aa23.08■■□□□ 1.29
SRM-204ENST00000475189 LRRC59Q96AG4 307 aaKnown RBP23.08■■□□□ 1.29
SRM-204ENST00000475189 CDK19Q9BWU1 502 aa23.08■■□□□ 1.29
SRM-204ENST00000475189 PXDNQ92626 1479 aa23.06■■□□□ 1.28
SRM-204ENST00000475189 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
SRM-204ENST00000475189 ATP7BP35670 1465 aa23.05■■□□□ 1.28
SRM-204ENST00000475189 NUDT16Q96DE0 195 aaKnown RBP23.04■■□□□ 1.28
SRM-204ENST00000475189 XPCQ01831 940 aaPredicted RBP23.03■■□□□ 1.28
SRM-204ENST00000475189 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
SRM-204ENST00000475189 TOPAZ1Q8N9V7 1692 aa23.02■■□□□ 1.28
SRM-204ENST00000475189 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
SRM-204ENST00000475189 SPATA31A6Q5VVP1 1343 aa23.01■■□□□ 1.27
SRM-204ENST00000475189 KRT28Q7Z3Y7 464 aa23■■□□□ 1.27
SRM-204ENST00000475189 SRPK2P78362 688 aaKnown RBP22.99■■□□□ 1.27
SRM-204ENST00000475189 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
SRM-204ENST00000475189 EVC2Q86UK5 1308 aa22.98■■□□□ 1.27
SRM-204ENST00000475189 SBNO2Q9Y2G9 1366 aa22.98■■□□□ 1.27
SRM-204ENST00000475189 LRP6O75581 1613 aa22.97■■□□□ 1.27
SRM-204ENST00000475189 PSME1Q06323 249 aa22.97■■□□□ 1.27
SRM-204ENST00000475189 CCDC61Q9Y6R9 512 aa22.97■■□□□ 1.27
SRM-204ENST00000475189 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
SRM-204ENST00000475189 SPATA31A3Q5VYP0 1347 aa22.95■■□□□ 1.26
SRM-204ENST00000475189 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
SRM-204ENST00000475189 PLEKHG3A1L390 1219 aa22.94■■□□□ 1.26
SRM-204ENST00000475189 NGDNQ8NEJ9 315 aaKnown RBP22.94■■□□□ 1.26
SRM-204ENST00000475189 SBNO1A3KN83 1393 aa22.93■■□□□ 1.26
SRM-204ENST00000475189 ST20-MTHFSA0A0A6YYL1 179 aa22.93■■□□□ 1.26
SRM-204ENST00000475189 NUTM2BA6NNL0 878 aaPredicted RBP22.93■■□□□ 1.26
SRM-204ENST00000475189 NUTM2EB1AL46 878 aaPredicted RBP22.93■■□□□ 1.26
SRM-204ENST00000475189 NUTM2AQ8IVF1 878 aaPredicted RBP22.93■■□□□ 1.26
SRM-204ENST00000475189 TNS3Q68CZ2 1445 aa22.91■■□□□ 1.26
SRM-204ENST00000475189 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
SRM-204ENST00000475189 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
SRM-204ENST00000475189 USP47Q96K76 1375 aa22.91■■□□□ 1.26
SRM-204ENST00000475189 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
SRM-204ENST00000475189 ACEP12821 1306 aa22.9■■□□□ 1.26
SRM-204ENST00000475189 TESK2Q96S53 571 aa22.9■■□□□ 1.26
SRM-204ENST00000475189 ALS2Q96Q42 1657 aa22.88■■□□□ 1.25
SRM-204ENST00000475189 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
SRM-204ENST00000475189 MEX3CQ5U5Q3 659 aaKnown RBP22.87■■□□□ 1.25
SRM-204ENST00000475189 RGS17Q9UGC6 210 aaPredicted RBP22.87■■□□□ 1.25
SRM-204ENST00000475189 LMOD2Q6P5Q4 547 aa22.85■■□□□ 1.25
SRM-204ENST00000475189 ARHGEF10O15013 1369 aa22.85■■□□□ 1.25
SRM-204ENST00000475189 ATAD2Q6PL18 1390 aa22.85■■□□□ 1.25
SRM-204ENST00000475189 MARF1Q9Y4F3 1742 aaKnown RBP22.83■■□□□ 1.25
SRM-204ENST00000475189 PAK3O75914 559 aaPredicted RBP22.83■■□□□ 1.25
SRM-204ENST00000475189 SLC24A1O60721 1099 aa22.82■■□□□ 1.24
SRM-204ENST00000475189 ADAMTS2O95450 1211 aa22.82■■□□□ 1.24
SRM-204ENST00000475189 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
SRM-204ENST00000475189 ABCA3Q99758 1704 aa22.82■■□□□ 1.24
SRM-204ENST00000475189 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
SRM-204ENST00000475189 CABLES1Q8TDN4 633 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 874 ms