RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.05
CASC3-204ENST00000474190 NCOA3Q9Y6Q9 1424 aa14.75□□□□□ -0.05
CASC3-204ENST00000474190 PROSER2Q86WR7 435 aaPredicted RBP14.75□□□□□ -0.05
CASC3-204ENST00000474190 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.75□□□□□ -0.05
CASC3-204ENST00000474190 USP47Q96K76 1375 aa14.74□□□□□ -0.05
CASC3-204ENST00000474190 ARHGEF28Q8N1W1 1705 aaKnown RBP14.73□□□□□ -0.05
CASC3-204ENST00000474190 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
CASC3-204ENST00000474190 TOM1O60784 492 aa14.73□□□□□ -0.05
CASC3-204ENST00000474190 ADGRL3Q9HAR2 1447 aa14.73□□□□□ -0.05
CASC3-204ENST00000474190 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
CASC3-204ENST00000474190 XIRP1Q702N8 1843 aaKnown RBP14.72□□□□□ -0.05
CASC3-204ENST00000474190 HSPA5P11021 654 aaKnown RBP14.72□□□□□ -0.05
CASC3-204ENST00000474190 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
CASC3-204ENST00000474190 SAFB2Q14151 953 aaKnown RBP eCLIP14.72□□□□□ -0.05
CASC3-204ENST00000474190 SBNO2Q9Y2G9 1366 aa14.72□□□□□ -0.05
CASC3-204ENST00000474190 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
CASC3-204ENST00000474190 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
CASC3-204ENST00000474190 TULP4Q9NRJ4 1543 aa14.69□□□□□ -0.06
CASC3-204ENST00000474190 ADGRB2O60241 1585 aa14.68□□□□□ -0.06
CASC3-204ENST00000474190 MINK1Q8N4C8 1332 aaPredicted RBP14.68□□□□□ -0.06
CASC3-204ENST00000474190 PRR36Q9H6K5 1346 aa14.68□□□□□ -0.06
CASC3-204ENST00000474190 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
CASC3-204ENST00000474190 POGKQ9P215 609 aa14.68□□□□□ -0.06
CASC3-204ENST00000474190 DCCP43146 1447 aa14.67□□□□□ -0.06
CASC3-204ENST00000474190 NALCNQ8IZF0 1738 aa14.67□□□□□ -0.06
CASC3-204ENST00000474190 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
CASC3-204ENST00000474190 WASLO00401 505 aaPredicted RBP14.66□□□□□ -0.06
CASC3-204ENST00000474190 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
CASC3-204ENST00000474190 MST1RQ04912 1400 aa14.66□□□□□ -0.06
CASC3-204ENST00000474190 CDC42BPGQ6DT37 1551 aa14.65□□□□□ -0.06
CASC3-204ENST00000474190 RGS17Q9UGC6 210 aaPredicted RBP14.65□□□□□ -0.06
CASC3-204ENST00000474190 MSH6P52701 1360 aa14.63□□□□□ -0.07
CASC3-204ENST00000474190 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
CASC3-204ENST00000474190 C1orf167Q5SNV9 1468 aa14.63□□□□□ -0.07
CASC3-204ENST00000474190 ATP7BP35670 1465 aa14.62□□□□□ -0.07
CASC3-204ENST00000474190 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
CASC3-204ENST00000474190 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
CASC3-204ENST00000474190 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
CASC3-204ENST00000474190 CADPS2Q86UW7 1296 aa14.6□□□□□ -0.07
CASC3-204ENST00000474190 SLAIN2Q9P270 581 aa14.6□□□□□ -0.07
CASC3-204ENST00000474190 ANKARQ7Z5J8 1434 aa14.59□□□□□ -0.07
CASC3-204ENST00000474190 NUTM2FA1L443 756 aa14.59□□□□□ -0.07
CASC3-204ENST00000474190 C14orf37Q86TY3 774 aa14.59□□□□□ -0.07
CASC3-204ENST00000474190 PUS7Q96PZ0 661 aaKnown RBP14.59□□□□□ -0.07
CASC3-204ENST00000474190 ORAI2Q96SN7 254 aa14.59□□□□□ -0.07
CASC3-204ENST00000474190 BRINP3Q76B58 766 aa14.58□□□□□ -0.08
CASC3-204ENST00000474190 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
CASC3-204ENST00000474190 EVC2Q86UK5 1308 aa14.58□□□□□ -0.08
CASC3-204ENST00000474190 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
CASC3-204ENST00000474190 ATF3P18847 181 aa14.57□□□□□ -0.08
CASC3-204ENST00000474190 KIF7Q2M1P5 1343 aa14.56□□□□□ -0.08
CASC3-204ENST00000474190 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
CASC3-204ENST00000474190 CD163L1Q9NR16 1453 aa14.56□□□□□ -0.08
CASC3-204ENST00000474190 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
CASC3-204ENST00000474190 TMF1P82094 1093 aa14.54□□□□□ -0.08
CASC3-204ENST00000474190 DDX17Q92841 729 aaKnown RBP14.54□□□□□ -0.08
CASC3-204ENST00000474190 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
CASC3-204ENST00000474190 POLR3AO14802 1390 aaPredicted RBP14.53□□□□□ -0.08
CASC3-204ENST00000474190 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
CASC3-204ENST00000474190 POTEAQ6S8J7 498 aa14.53□□□□□ -0.08
CASC3-204ENST00000474190 CABP1Q9NZU7 370 aa14.53□□□□□ -0.08
CASC3-204ENST00000474190 TOPAZ1Q8N9V7 1692 aa14.52□□□□□ -0.08
CASC3-204ENST00000474190 CPSF1Q10570 1443 aaKnown RBP14.52□□□□□ -0.08
CASC3-204ENST00000474190 CCDC7Q96M83 1385 aa14.52□□□□□ -0.08
CASC3-204ENST00000474190 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
CASC3-204ENST00000474190 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
CASC3-204ENST00000474190 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
CASC3-204ENST00000474190 PPIP5K1Q6PFW1 1433 aa14.5□□□□□ -0.09
CASC3-204ENST00000474190 SSH2Q76I76 1423 aa14.5□□□□□ -0.09
CASC3-204ENST00000474190 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
CASC3-204ENST00000474190 PMFBP1Q8TBY8 1022 aa14.5□□□□□ -0.09
CASC3-204ENST00000474190 PHF8Q9UPP1 1060 aa14.5□□□□□ -0.09
CASC3-204ENST00000474190 ACEP12821 1306 aa14.48□□□□□ -0.09
CASC3-204ENST00000474190 SOS2Q07890 1332 aaPredicted RBP14.48□□□□□ -0.09
CASC3-204ENST00000474190 FOXO3O43524 673 aa14.48□□□□□ -0.09
CASC3-204ENST00000474190 CARD14Q9BXL6 1004 aa14.48□□□□□ -0.09
CASC3-204ENST00000474190 PXDNQ92626 1479 aa14.48□□□□□ -0.09
CASC3-204ENST00000474190 A0A1W2PP64 1363 aa14.47□□□□□ -0.09
CASC3-204ENST00000474190 MYOM1P52179 1685 aa14.46□□□□□ -0.09
CASC3-204ENST00000474190 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.09
CASC3-204ENST00000474190 AHDC1Q5TGY3 1603 aaPredicted RBP14.45□□□□□ -0.1
CASC3-204ENST00000474190 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
CASC3-204ENST00000474190 XPCQ01831 940 aaPredicted RBP14.45□□□□□ -0.1
CASC3-204ENST00000474190 CDCA8Q53HL2 280 aa14.45□□□□□ -0.1
CASC3-204ENST00000474190 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
CASC3-204ENST00000474190 USP6P35125 1406 aa14.44□□□□□ -0.1
CASC3-204ENST00000474190 ANKRD36BQ8N2N9 1353 aa14.44□□□□□ -0.1
CASC3-204ENST00000474190 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
CASC3-204ENST00000474190 NHSL1Q5SYE7 1610 aa14.42□□□□□ -0.1
CASC3-204ENST00000474190 ZNF316A6NFI3 1004 aaPredicted RBP14.42□□□□□ -0.1
CASC3-204ENST00000474190 KRT28Q7Z3Y7 464 aa14.42□□□□□ -0.1
CASC3-204ENST00000474190 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
CASC3-204ENST00000474190 NPHP3Q7Z494 1330 aa14.41□□□□□ -0.1
CASC3-204ENST00000474190 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
CASC3-204ENST00000474190 NGDNQ8NEJ9 315 aaKnown RBP14.41□□□□□ -0.1
CASC3-204ENST00000474190 PANK3Q9H999 370 aa14.41□□□□□ -0.1
CASC3-204ENST00000474190 KIF1AQ12756 1690 aa14.41□□□□□ -0.1
CASC3-204ENST00000474190 SBNO1A3KN83 1393 aa14.4□□□□□ -0.1
CASC3-204ENST00000474190 SPATA31A3Q5VYP0 1347 aa14.4□□□□□ -0.1
CASC3-204ENST00000474190 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms