RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NHSL1Q5SYE7 1610 aa29.78■■■□□ 2.36
SNX13-206ENST00000474067 SHPRHQ149N8 1683 aa29.77■■■□□ 2.36
SNX13-206ENST00000474067 CFAP70Q5T0N1 1121 aa29.77■■■□□ 2.36
SNX13-206ENST00000474067 KDM2AQ9Y2K7 1162 aa29.74■■■□□ 2.35
SNX13-206ENST00000474067 MEX3CQ5U5Q3 659 aaKnown RBP29.72■■■□□ 2.35
SNX13-206ENST00000474067 DLC1Q96QB1 1528 aa29.71■■■□□ 2.35
SNX13-206ENST00000474067 WAPLQ7Z5K2 1190 aa29.71■■■□□ 2.35
SNX13-206ENST00000474067 POGKQ9P215 609 aa29.69■■■□□ 2.34
SNX13-206ENST00000474067 NPHP3Q7Z494 1330 aa29.69■■■□□ 2.34
SNX13-206ENST00000474067 ESCO1Q5FWF5 840 aa29.67■■■□□ 2.34
SNX13-206ENST00000474067 ORAI2Q96SN7 254 aa29.65■■■□□ 2.34
SNX13-206ENST00000474067 PRAM1Q96QH2 718 aa29.64■■■□□ 2.34
SNX13-206ENST00000474067 ADGRB1O14514 1584 aa29.63■■■□□ 2.33
SNX13-206ENST00000474067 SOS2Q07890 1332 aaPredicted RBP29.63■■■□□ 2.33
SNX13-206ENST00000474067 EIF3AQ14152 1382 aaKnown RBP29.63■■■□□ 2.33
SNX13-206ENST00000474067 PLEKHH1Q9ULM0 1364 aa29.63■■■□□ 2.33
SNX13-206ENST00000474067 ZNF772Q68DY9 489 aaPredicted RBP29.61■■■□□ 2.33
SNX13-206ENST00000474067 FMN2Q9NZ56 1722 aa29.61■■■□□ 2.33
SNX13-206ENST00000474067 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
SNX13-206ENST00000474067 PNPLA6Q8IY17 1366 aa29.58■■■□□ 2.33
SNX13-206ENST00000474067 TRAK1Q9UPV9 953 aa29.58■■■□□ 2.33
SNX13-206ENST00000474067 KIAA1210Q9ULL0 1709 aa29.57■■■□□ 2.32
SNX13-206ENST00000474067 NUTM2BA6NNL0 878 aaPredicted RBP29.56■■■□□ 2.32
SNX13-206ENST00000474067 NUTM2EB1AL46 878 aaPredicted RBP29.56■■■□□ 2.32
SNX13-206ENST00000474067 NUTM2AQ8IVF1 878 aaPredicted RBP29.56■■■□□ 2.32
SNX13-206ENST00000474067 RGS17Q9UGC6 210 aaPredicted RBP29.56■■■□□ 2.32
SNX13-206ENST00000474067 LRP6O75581 1613 aa29.56■■■□□ 2.32
SNX13-206ENST00000474067 DDX17Q92841 729 aaKnown RBP29.55■■■□□ 2.32
SNX13-206ENST00000474067 ADGRB2O60241 1585 aa29.55■■■□□ 2.32
SNX13-206ENST00000474067 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
SNX13-206ENST00000474067 ANKARQ7Z5J8 1434 aa29.54■■■□□ 2.32
SNX13-206ENST00000474067 NUTM2FA1L443 756 aa29.53■■■□□ 2.32
SNX13-206ENST00000474067 SAFB2Q14151 953 aaKnown RBP eCLIP29.53■■■□□ 2.32
SNX13-206ENST00000474067 FOXO3O43524 673 aa29.52■■■□□ 2.32
SNX13-206ENST00000474067 PSME1Q06323 249 aa29.5■■■□□ 2.31
SNX13-206ENST00000474067 PHF8Q9UPP1 1060 aa29.48■■■□□ 2.31
SNX13-206ENST00000474067 PXDNQ92626 1479 aa29.48■■■□□ 2.31
SNX13-206ENST00000474067 POTEAQ6S8J7 498 aa29.46■■■□□ 2.31
SNX13-206ENST00000474067 COL22A1Q8NFW1 1626 aaPredicted RBP29.45■■■□□ 2.31
SNX13-206ENST00000474067 ARHGEF28Q8N1W1 1705 aaKnown RBP29.44■■■□□ 2.3
SNX13-206ENST00000474067 MINK1Q8N4C8 1332 aaPredicted RBP29.44■■■□□ 2.3
SNX13-206ENST00000474067 TULP4Q9NRJ4 1543 aa29.42■■■□□ 2.3
SNX13-206ENST00000474067 WASLO00401 505 aaPredicted RBP29.42■■■□□ 2.3
SNX13-206ENST00000474067 C8orf37Q96NL8 207 aa29.42■■■□□ 2.3
SNX13-206ENST00000474067 KRT28Q7Z3Y7 464 aa29.41■■■□□ 2.3
SNX13-206ENST00000474067 L3MBTL2Q969R5 705 aa29.4■■■□□ 2.3
SNX13-206ENST00000474067 AFF2P51816 1311 aa29.4■■■□□ 2.3
SNX13-206ENST00000474067 NGLY1Q96IV0 654 aa29.39■■■□□ 2.3
SNX13-206ENST00000474067 HIRIP3Q9BW71 556 aaPredicted RBP29.39■■■□□ 2.3
SNX13-206ENST00000474067 NEUROD1Q13562 356 aa29.38■■■□□ 2.29
SNX13-206ENST00000474067 SPATA31A3Q5VYP0 1347 aa29.38■■■□□ 2.29
SNX13-206ENST00000474067 GPRASP1Q5JY77 1395 aa29.38■■■□□ 2.29
SNX13-206ENST00000474067 ADAMTS2O95450 1211 aa29.37■■■□□ 2.29
SNX13-206ENST00000474067 XPCQ01831 940 aaPredicted RBP29.37■■■□□ 2.29
SNX13-206ENST00000474067 SBNO1A3KN83 1393 aa29.37■■■□□ 2.29
SNX13-206ENST00000474067 RGPD8O14715 1765 aaPredicted RBP29.36■■■□□ 2.29
SNX13-206ENST00000474067 RXRBP28702 533 aa29.36■■■□□ 2.29
SNX13-206ENST00000474067 ARHGEF10O15013 1369 aa29.36■■■□□ 2.29
SNX13-206ENST00000474067 SIN3AQ96ST3 1273 aa29.35■■■□□ 2.29
SNX13-206ENST00000474067 TNS3Q68CZ2 1445 aa29.35■■■□□ 2.29
SNX13-206ENST00000474067 ITSN1Q15811 1721 aa29.34■■■□□ 2.29
SNX13-206ENST00000474067 HAP1P54257 671 aaPredicted RBP29.33■■■□□ 2.29
SNX13-206ENST00000474067 USP32Q8NFA0 1604 aa29.32■■■□□ 2.28
SNX13-206ENST00000474067 CDK12Q9NYV4 1490 aaPredicted RBP29.3■■■□□ 2.28
SNX13-206ENST00000474067 CENPJQ9HC77 1338 aaPredicted RBP29.3■■■□□ 2.28
SNX13-206ENST00000474067 NBPF1Q3BBV0 1214 aa29.3■■■□□ 2.28
SNX13-206ENST00000474067 PMFBP1Q8TBY8 1022 aa29.3■■■□□ 2.28
SNX13-206ENST00000474067 NGDNQ8NEJ9 315 aaKnown RBP29.29■■■□□ 2.28
SNX13-206ENST00000474067 TONSLQ96HA7 1378 aa29.28■■■□□ 2.28
SNX13-206ENST00000474067 QTRT2Q9H974 415 aaKnown RBP29.28■■■□□ 2.28
SNX13-206ENST00000474067 USP21Q9UK80 565 aa29.28■■■□□ 2.28
SNX13-206ENST00000474067 RBM6P78332 1123 aaKnown RBP29.27■■■□□ 2.28
SNX13-206ENST00000474067 FNBP4Q8N3X1 1017 aaPredicted RBP29.27■■■□□ 2.28
SNX13-206ENST00000474067 TRPC5Q9UL62 973 aaPredicted RBP29.27■■■□□ 2.28
SNX13-206ENST00000474067 ROCK2O75116 1388 aaKnown RBP29.26■■■□□ 2.28
SNX13-206ENST00000474067 MARF1Q9Y4F3 1742 aaKnown RBP29.26■■■□□ 2.27
SNX13-206ENST00000474067 LMOD2Q6P5Q4 547 aa29.26■■■□□ 2.27
SNX13-206ENST00000474067 NUDT16Q96DE0 195 aaKnown RBP29.26■■■□□ 2.27
SNX13-206ENST00000474067 CDK19Q9BWU1 502 aa29.26■■■□□ 2.27
SNX13-206ENST00000474067 TRPM1Q7Z4N2 1603 aa29.25■■■□□ 2.27
SNX13-206ENST00000474067 ATP7BP35670 1465 aa29.24■■■□□ 2.27
SNX13-206ENST00000474067 CCDC61Q9Y6R9 512 aa29.24■■■□□ 2.27
SNX13-206ENST00000474067 PRR36Q9H6K5 1346 aa29.23■■■□□ 2.27
SNX13-206ENST00000474067 SRPK2P78362 688 aaKnown RBP29.2■■■□□ 2.26
SNX13-206ENST00000474067 QRICH2Q9H0J4 1663 aa29.18■■■□□ 2.26
SNX13-206ENST00000474067 EVC2Q86UK5 1308 aa29.17■■■□□ 2.26
SNX13-206ENST00000474067 PAK3O75914 559 aaPredicted RBP29.16■■■□□ 2.26
SNX13-206ENST00000474067 TRPM3Q9HCF6 1732 aaPredicted RBP29.16■■■□□ 2.26
SNX13-206ENST00000474067 PLEKHG3A1L390 1219 aa29.14■■■□□ 2.26
SNX13-206ENST00000474067 TOPAZ1Q8N9V7 1692 aa29.14■■■□□ 2.26
SNX13-206ENST00000474067 POLR3AO14802 1390 aaPredicted RBP29.13■■■□□ 2.25
SNX13-206ENST00000474067 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.13■■■□□ 2.25
SNX13-206ENST00000474067 BRD4O60885 1362 aaPredicted RBP29.13■■■□□ 2.25
SNX13-206ENST00000474067 ATRNO75882 1429 aa29.12■■■□□ 2.25
SNX13-206ENST00000474067 ALS2Q96Q42 1657 aa29.12■■■□□ 2.25
SNX13-206ENST00000474067 UNC5CLQ8IV45 518 aa29.11■■■□□ 2.25
SNX13-206ENST00000474067 ACEP12821 1306 aa29.1■■■□□ 2.25
SNX13-206ENST00000474067 CARD11Q9BXL7 1154 aa29.09■■■□□ 2.25
SNX13-206ENST00000474067 PPIP5K1Q6PFW1 1433 aa29.09■■■□□ 2.25
SNX13-206ENST00000474067 BCL9LQ86UU0 1499 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms