RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
BRAT1-205ENST00000473879 STK26Q9P289 416 aa18.98■□□□□ 0.63
BRAT1-205ENST00000473879 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
BRAT1-205ENST00000473879 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
BRAT1-205ENST00000473879 BRINP3Q76B58 766 aa18.97■□□□□ 0.63
BRAT1-205ENST00000473879 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
BRAT1-205ENST00000473879 SIRT1Q96EB6 747 aa18.97■□□□□ 0.63
BRAT1-205ENST00000473879 COL16A1Q07092 1604 aaPredicted RBP18.96■□□□□ 0.63
BRAT1-205ENST00000473879 KDM2AQ9Y2K7 1162 aa18.96■□□□□ 0.63
BRAT1-205ENST00000473879 SOCS7O14512 581 aa18.95■□□□□ 0.62
BRAT1-205ENST00000473879 CDC42BPGQ6DT37 1551 aa18.94■□□□□ 0.62
BRAT1-205ENST00000473879 NHSL1Q5SYE7 1610 aa18.94■□□□□ 0.62
BRAT1-205ENST00000473879 WAPLQ7Z5K2 1190 aa18.94■□□□□ 0.62
BRAT1-205ENST00000473879 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
BRAT1-205ENST00000473879 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
BRAT1-205ENST00000473879 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
BRAT1-205ENST00000473879 JCADQ9P266 1359 aa18.91■□□□□ 0.62
BRAT1-205ENST00000473879 PLEKHH1Q9ULM0 1364 aa18.91■□□□□ 0.62
BRAT1-205ENST00000473879 ADGRB2O60241 1585 aa18.9■□□□□ 0.62
BRAT1-205ENST00000473879 SHPRHQ149N8 1683 aa18.89■□□□□ 0.61
BRAT1-205ENST00000473879 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
BRAT1-205ENST00000473879 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
BRAT1-205ENST00000473879 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
BRAT1-205ENST00000473879 ORAI2Q96SN7 254 aa18.85■□□□□ 0.61
BRAT1-205ENST00000473879 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
BRAT1-205ENST00000473879 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
BRAT1-205ENST00000473879 SPATA31A6Q5VVP1 1343 aa18.83■□□□□ 0.61
BRAT1-205ENST00000473879 POGKQ9P215 609 aa18.83■□□□□ 0.6
BRAT1-205ENST00000473879 TRAK1Q9UPV9 953 aa18.83■□□□□ 0.6
BRAT1-205ENST00000473879 NBPF1Q3BBV0 1214 aa18.82■□□□□ 0.6
BRAT1-205ENST00000473879 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
BRAT1-205ENST00000473879 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
BRAT1-205ENST00000473879 ESCO1Q5FWF5 840 aa18.81■□□□□ 0.6
BRAT1-205ENST00000473879 SAFB2Q14151 953 aaKnown RBP eCLIP18.8■□□□□ 0.6
BRAT1-205ENST00000473879 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
BRAT1-205ENST00000473879 NUTM2FA1L443 756 aa18.78■□□□□ 0.6
BRAT1-205ENST00000473879 KIF1AQ12756 1690 aa18.78■□□□□ 0.6
BRAT1-205ENST00000473879 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
BRAT1-205ENST00000473879 RGS17Q9UGC6 210 aaPredicted RBP18.77■□□□□ 0.6
BRAT1-205ENST00000473879 RGPD8O14715 1765 aaPredicted RBP18.77■□□□□ 0.6
BRAT1-205ENST00000473879 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
BRAT1-205ENST00000473879 LRP6O75581 1613 aa18.76■□□□□ 0.59
BRAT1-205ENST00000473879 PNPLA6Q8IY17 1366 aa18.75■□□□□ 0.59
BRAT1-205ENST00000473879 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
BRAT1-205ENST00000473879 FOXO3O43524 673 aa18.74■□□□□ 0.59
BRAT1-205ENST00000473879 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
BRAT1-205ENST00000473879 ANKARQ7Z5J8 1434 aa18.73■□□□□ 0.59
BRAT1-205ENST00000473879 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-205ENST00000473879 SBNO2Q9Y2G9 1366 aa18.72■□□□□ 0.59
BRAT1-205ENST00000473879 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
BRAT1-205ENST00000473879 PXDNQ92626 1479 aa18.71■□□□□ 0.59
BRAT1-205ENST00000473879 EIF3AQ14152 1382 aaKnown RBP18.71■□□□□ 0.59
BRAT1-205ENST00000473879 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
BRAT1-205ENST00000473879 TOPAZ1Q8N9V7 1692 aa18.71■□□□□ 0.59
BRAT1-205ENST00000473879 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
BRAT1-205ENST00000473879 PHF8Q9UPP1 1060 aa18.71■□□□□ 0.59
BRAT1-205ENST00000473879 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.58
BRAT1-205ENST00000473879 NUTM2BA6NNL0 878 aaPredicted RBP18.7■□□□□ 0.58
BRAT1-205ENST00000473879 NUTM2EB1AL46 878 aaPredicted RBP18.7■□□□□ 0.58
BRAT1-205ENST00000473879 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
BRAT1-205ENST00000473879 NUTM2AQ8IVF1 878 aaPredicted RBP18.7■□□□□ 0.58
BRAT1-205ENST00000473879 ATP7BP35670 1465 aa18.69■□□□□ 0.58
BRAT1-205ENST00000473879 ITSN1Q15811 1721 aa18.67■□□□□ 0.58
BRAT1-205ENST00000473879 XPCQ01831 940 aaPredicted RBP18.67■□□□□ 0.58
BRAT1-205ENST00000473879 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
BRAT1-205ENST00000473879 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
BRAT1-205ENST00000473879 PRR36Q9H6K5 1346 aa18.66■□□□□ 0.58
BRAT1-205ENST00000473879 CENPJQ9HC77 1338 aaPredicted RBP18.66■□□□□ 0.58
BRAT1-205ENST00000473879 PSME1Q06323 249 aa18.65■□□□□ 0.58
BRAT1-205ENST00000473879 ZNF772Q68DY9 489 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-205ENST00000473879 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
BRAT1-205ENST00000473879 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
BRAT1-205ENST00000473879 EIF4G2P78344 907 aaKnown RBP eCLIP18.63■□□□□ 0.57
BRAT1-205ENST00000473879 PMFBP1Q8TBY8 1022 aa18.63■□□□□ 0.57
BRAT1-205ENST00000473879 CDK19Q9BWU1 502 aa18.63■□□□□ 0.57
BRAT1-205ENST00000473879 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
BRAT1-205ENST00000473879 MARF1Q9Y4F3 1742 aaKnown RBP18.63■□□□□ 0.57
BRAT1-205ENST00000473879 SBNO1A3KN83 1393 aa18.62■□□□□ 0.57
BRAT1-205ENST00000473879 NUDT16Q96DE0 195 aaKnown RBP18.61■□□□□ 0.57
BRAT1-205ENST00000473879 TNS3Q68CZ2 1445 aa18.6■□□□□ 0.57
BRAT1-205ENST00000473879 USP47Q96K76 1375 aa18.6■□□□□ 0.57
BRAT1-205ENST00000473879 C8orf37Q96NL8 207 aa18.6■□□□□ 0.57
BRAT1-205ENST00000473879 TRPM3Q9HCF6 1732 aaPredicted RBP18.6■□□□□ 0.57
BRAT1-205ENST00000473879 AFF2P51816 1311 aa18.59■□□□□ 0.57
BRAT1-205ENST00000473879 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
BRAT1-205ENST00000473879 ABCA3Q99758 1704 aa18.59■□□□□ 0.57
BRAT1-205ENST00000473879 TESK2Q96S53 571 aa18.58■□□□□ 0.56
BRAT1-205ENST00000473879 HSPA5P11021 654 aaKnown RBP18.57■□□□□ 0.56
BRAT1-205ENST00000473879 NGDNQ8NEJ9 315 aaKnown RBP18.57■□□□□ 0.56
BRAT1-205ENST00000473879 CCDC61Q9Y6R9 512 aa18.57■□□□□ 0.56
BRAT1-205ENST00000473879 ARHGEF10O15013 1369 aa18.56■□□□□ 0.56
BRAT1-205ENST00000473879 NGLY1Q96IV0 654 aa18.56■□□□□ 0.56
BRAT1-205ENST00000473879 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
BRAT1-205ENST00000473879 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
BRAT1-205ENST00000473879 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
BRAT1-205ENST00000473879 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
BRAT1-205ENST00000473879 FNBP4Q8N3X1 1017 aaPredicted RBP18.54■□□□□ 0.56
BRAT1-205ENST00000473879 EVC2Q86UK5 1308 aa18.52■□□□□ 0.56
BRAT1-205ENST00000473879 RXRBP28702 533 aa18.52■□□□□ 0.56
BRAT1-205ENST00000473879 LMOD2Q6P5Q4 547 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms