RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CADPS2Q86UW7 1296 aa28.4■■■□□ 2.14
HDAC7-220ENST00000471235 ATF3P18847 181 aa28.39■■■□□ 2.14
HDAC7-220ENST00000471235 SIRT1Q96EB6 747 aa28.39■■■□□ 2.14
HDAC7-220ENST00000471235 NBPF1Q3BBV0 1214 aa28.38■■■□□ 2.13
HDAC7-220ENST00000471235 CCER1Q8TC90 406 aaPredicted RBP28.38■■■□□ 2.13
HDAC7-220ENST00000471235 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
HDAC7-220ENST00000471235 TRAK1Q9UPV9 953 aa28.37■■■□□ 2.13
HDAC7-220ENST00000471235 QRICH2Q9H0J4 1663 aa28.37■■■□□ 2.13
HDAC7-220ENST00000471235 RALGAPBQ86X10 1494 aa28.36■■■□□ 2.13
HDAC7-220ENST00000471235 NBPF8Q3BBV2 869 aa28.36■■■□□ 2.13
HDAC7-220ENST00000471235 PHLPP1O60346 1717 aa28.35■■■□□ 2.13
HDAC7-220ENST00000471235 PRAM1Q96QH2 718 aa28.35■■■□□ 2.13
HDAC7-220ENST00000471235 SLAIN2Q9P270 581 aa28.35■■■□□ 2.13
HDAC7-220ENST00000471235 NHSL1Q5SYE7 1610 aa28.34■■■□□ 2.13
HDAC7-220ENST00000471235 ROCK2O75116 1388 aaKnown RBP28.31■■■□□ 2.12
HDAC7-220ENST00000471235 AHDC1Q5TGY3 1603 aaPredicted RBP28.3■■■□□ 2.12
HDAC7-220ENST00000471235 C1orf167Q5SNV9 1468 aa28.3■■■□□ 2.12
HDAC7-220ENST00000471235 SAFB2Q14151 953 aaKnown RBP eCLIP28.3■■■□□ 2.12
HDAC7-220ENST00000471235 USP32Q8NFA0 1604 aa28.29■■■□□ 2.12
HDAC7-220ENST00000471235 GPRASP1Q5JY77 1395 aa28.29■■■□□ 2.12
HDAC7-220ENST00000471235 POGKQ9P215 609 aa28.29■■■□□ 2.12
HDAC7-220ENST00000471235 HSPA1LP34931 641 aa28.27■■■□□ 2.12
HDAC7-220ENST00000471235 COL16A1Q07092 1604 aaPredicted RBP28.27■■■□□ 2.12
HDAC7-220ENST00000471235 KIF1AQ12756 1690 aa28.24■■■□□ 2.11
HDAC7-220ENST00000471235 ITSN1Q15811 1721 aa28.23■■■□□ 2.11
HDAC7-220ENST00000471235 BRINP3Q76B58 766 aa28.22■■■□□ 2.11
HDAC7-220ENST00000471235 TIMELESSQ9UNS1 1208 aa28.22■■■□□ 2.11
HDAC7-220ENST00000471235 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
HDAC7-220ENST00000471235 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.1
HDAC7-220ENST00000471235 TOPAZ1Q8N9V7 1692 aa28.19■■■□□ 2.1
HDAC7-220ENST00000471235 HIRIP3Q9BW71 556 aaPredicted RBP28.18■■■□□ 2.1
HDAC7-220ENST00000471235 CENPJQ9HC77 1338 aaPredicted RBP28.17■■■□□ 2.1
HDAC7-220ENST00000471235 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
HDAC7-220ENST00000471235 EIF3AQ14152 1382 aaKnown RBP28.15■■■□□ 2.1
HDAC7-220ENST00000471235 NUTM2FA1L443 756 aa28.15■■■□□ 2.1
HDAC7-220ENST00000471235 SHPRHQ149N8 1683 aa28.14■■■□□ 2.1
HDAC7-220ENST00000471235 ORAI2Q96SN7 254 aa28.14■■■□□ 2.1
HDAC7-220ENST00000471235 CARD11Q9BXL7 1154 aa28.14■■■□□ 2.1
HDAC7-220ENST00000471235 ATP7BP35670 1465 aa28.12■■■□□ 2.09
HDAC7-220ENST00000471235 WASLO00401 505 aaPredicted RBP28.1■■■□□ 2.09
HDAC7-220ENST00000471235 ESCO1Q5FWF5 840 aa28.08■■■□□ 2.09
HDAC7-220ENST00000471235 PRR36Q9H6K5 1346 aa28.07■■■□□ 2.08
HDAC7-220ENST00000471235 DDX17Q92841 729 aaKnown RBP28.06■■■□□ 2.08
HDAC7-220ENST00000471235 PXDNQ92626 1479 aa28.06■■■□□ 2.08
HDAC7-220ENST00000471235 MED1Q15648 1581 aaPredicted RBP28.05■■■□□ 2.08
HDAC7-220ENST00000471235 SBNO2Q9Y2G9 1366 aa28.03■■■□□ 2.08
HDAC7-220ENST00000471235 TRPM3Q9HCF6 1732 aaPredicted RBP28.02■■■□□ 2.08
HDAC7-220ENST00000471235 CDK19Q9BWU1 502 aa28.02■■■□□ 2.08
HDAC7-220ENST00000471235 JCADQ9P266 1359 aa28■■■□□ 2.07
HDAC7-220ENST00000471235 PHF8Q9UPP1 1060 aa28■■■□□ 2.07
HDAC7-220ENST00000471235 SOS2Q07890 1332 aaPredicted RBP27.99■■■□□ 2.07
HDAC7-220ENST00000471235 NPHP3Q7Z494 1330 aa27.99■■■□□ 2.07
HDAC7-220ENST00000471235 COL22A1Q8NFW1 1626 aaPredicted RBP27.99■■■□□ 2.07
HDAC7-220ENST00000471235 USP47Q96K76 1375 aa27.99■■■□□ 2.07
HDAC7-220ENST00000471235 NUDT16Q96DE0 195 aaKnown RBP27.97■■■□□ 2.07
HDAC7-220ENST00000471235 FOXO3O43524 673 aa27.96■■■□□ 2.07
HDAC7-220ENST00000471235 AKAP12Q02952 1782 aa27.95■■■□□ 2.06
HDAC7-220ENST00000471235 EVC2Q86UK5 1308 aa27.94■■■□□ 2.06
HDAC7-220ENST00000471235 ALS2Q96Q42 1657 aa27.94■■■□□ 2.06
HDAC7-220ENST00000471235 SRPK2P78362 688 aaKnown RBP27.94■■■□□ 2.06
HDAC7-220ENST00000471235 XPCQ01831 940 aaPredicted RBP27.93■■■□□ 2.06
HDAC7-220ENST00000471235 PMFBP1Q8TBY8 1022 aa27.93■■■□□ 2.06
HDAC7-220ENST00000471235 ABCA3Q99758 1704 aa27.92■■■□□ 2.06
HDAC7-220ENST00000471235 PNPLA6Q8IY17 1366 aa27.92■■■□□ 2.06
HDAC7-220ENST00000471235 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
HDAC7-220ENST00000471235 PPIP5K1Q6PFW1 1433 aa27.91■■■□□ 2.06
HDAC7-220ENST00000471235 LRP6O75581 1613 aa27.9■■■□□ 2.06
HDAC7-220ENST00000471235 ST20-MTHFSA0A0A6YYL1 179 aa27.9■■■□□ 2.06
HDAC7-220ENST00000471235 LRRC59Q96AG4 307 aaKnown RBP27.9■■■□□ 2.06
HDAC7-220ENST00000471235 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.05
HDAC7-220ENST00000471235 TESK2Q96S53 571 aa27.88■■■□□ 2.05
HDAC7-220ENST00000471235 CCDC61Q9Y6R9 512 aa27.88■■■□□ 2.05
HDAC7-220ENST00000471235 TNS3Q68CZ2 1445 aa27.87■■■□□ 2.05
HDAC7-220ENST00000471235 POLR3AO14802 1390 aaPredicted RBP27.86■■■□□ 2.05
HDAC7-220ENST00000471235 KRT28Q7Z3Y7 464 aa27.86■■■□□ 2.05
HDAC7-220ENST00000471235 MON2Q7Z3U7 1717 aa27.86■■■□□ 2.05
HDAC7-220ENST00000471235 CRYBG1Q9Y4K1 1723 aa27.86■■■□□ 2.05
HDAC7-220ENST00000471235 SPATA31A6Q5VVP1 1343 aa27.85■■■□□ 2.05
HDAC7-220ENST00000471235 SBNO1A3KN83 1393 aa27.85■■■□□ 2.05
HDAC7-220ENST00000471235 ATAD2Q6PL18 1390 aa27.84■■■□□ 2.05
HDAC7-220ENST00000471235 NRKQ7Z2Y5 1582 aa27.83■■■□□ 2.05
HDAC7-220ENST00000471235 PLEKHG3A1L390 1219 aa27.83■■■□□ 2.05
HDAC7-220ENST00000471235 NGDNQ8NEJ9 315 aaKnown RBP27.83■■■□□ 2.05
HDAC7-220ENST00000471235 PSME1Q06323 249 aa27.82■■■□□ 2.04
HDAC7-220ENST00000471235 SPATA31A3Q5VYP0 1347 aa27.82■■■□□ 2.04
HDAC7-220ENST00000471235 ACEP12821 1306 aa27.81■■■□□ 2.04
HDAC7-220ENST00000471235 DISP3Q9P2K9 1392 aa27.8■■■□□ 2.04
HDAC7-220ENST00000471235 MYOM1P52179 1685 aa27.8■■■□□ 2.04
HDAC7-220ENST00000471235 PHRF1Q9P1Y6 1649 aaKnown RBP27.78■■■□□ 2.04
HDAC7-220ENST00000471235 CABP1Q9NZU7 370 aa27.76■■■□□ 2.03
HDAC7-220ENST00000471235 ARHGEF10O15013 1369 aa27.75■■■□□ 2.03
HDAC7-220ENST00000471235 USP6P35125 1406 aa27.75■■■□□ 2.03
HDAC7-220ENST00000471235 NUTM2BA6NNL0 878 aaPredicted RBP27.74■■■□□ 2.03
HDAC7-220ENST00000471235 NUTM2EB1AL46 878 aaPredicted RBP27.74■■■□□ 2.03
HDAC7-220ENST00000471235 NUTM2AQ8IVF1 878 aaPredicted RBP27.74■■■□□ 2.03
HDAC7-220ENST00000471235 PIK3C2AO00443 1686 aa27.74■■■□□ 2.03
HDAC7-220ENST00000471235 CD163L1Q9NR16 1453 aa27.73■■■□□ 2.03
HDAC7-220ENST00000471235 SLC24A1O60721 1099 aa27.73■■■□□ 2.03
HDAC7-220ENST00000471235 EIF4G2P78344 907 aaKnown RBP eCLIP27.72■■■□□ 2.03
HDAC7-220ENST00000471235 PUS7Q96PZ0 661 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms