RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 SIRT1Q96EB6 747 aa22.78■■□□□ 1.24
HDAC6-218ENST00000470942 NHSL1Q5SYE7 1610 aa22.78■■□□□ 1.24
HDAC6-218ENST00000470942 CDC42BPGQ6DT37 1551 aa22.77■■□□□ 1.24
HDAC6-218ENST00000470942 DDX17Q92841 729 aaKnown RBP22.76■■□□□ 1.23
HDAC6-218ENST00000470942 ORAI2Q96SN7 254 aa22.76■■□□□ 1.23
HDAC6-218ENST00000470942 SAFB2Q14151 953 aaKnown RBP eCLIP22.75■■□□□ 1.23
HDAC6-218ENST00000470942 POGKQ9P215 609 aa22.75■■□□□ 1.23
HDAC6-218ENST00000470942 NUTM2FA1L443 756 aa22.74■■□□□ 1.23
HDAC6-218ENST00000470942 PRAM1Q96QH2 718 aa22.74■■□□□ 1.23
HDAC6-218ENST00000470942 TRAK1Q9UPV9 953 aa22.74■■□□□ 1.23
HDAC6-218ENST00000470942 ADGRB1O14514 1584 aa22.74■■□□□ 1.23
HDAC6-218ENST00000470942 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
HDAC6-218ENST00000470942 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
HDAC6-218ENST00000470942 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
HDAC6-218ENST00000470942 SHPRHQ149N8 1683 aa22.71■■□□□ 1.23
HDAC6-218ENST00000470942 NEUROD1Q13562 356 aa22.71■■□□□ 1.23
HDAC6-218ENST00000470942 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
HDAC6-218ENST00000470942 FMN2Q9NZ56 1722 aa22.7■■□□□ 1.22
HDAC6-218ENST00000470942 SPATA31A6Q5VVP1 1343 aa22.69■■□□□ 1.22
HDAC6-218ENST00000470942 KIAA1210Q9ULL0 1709 aa22.66■■□□□ 1.22
HDAC6-218ENST00000470942 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
HDAC6-218ENST00000470942 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-218ENST00000470942 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-218ENST00000470942 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-218ENST00000470942 L3MBTL2Q969R5 705 aa22.65■■□□□ 1.22
HDAC6-218ENST00000470942 RGPD8O14715 1765 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-218ENST00000470942 SOS2Q07890 1332 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-218ENST00000470942 MINK1Q8N4C8 1332 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-218ENST00000470942 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-218ENST00000470942 RGS17Q9UGC6 210 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-218ENST00000470942 LRP6O75581 1613 aa22.63■■□□□ 1.21
HDAC6-218ENST00000470942 NPHP3Q7Z494 1330 aa22.62■■□□□ 1.21
HDAC6-218ENST00000470942 FOXO3O43524 673 aa22.62■■□□□ 1.21
HDAC6-218ENST00000470942 ARHGEF28Q8N1W1 1705 aaKnown RBP22.62■■□□□ 1.21
HDAC6-218ENST00000470942 NBPF1Q3BBV0 1214 aa22.61■■□□□ 1.21
HDAC6-218ENST00000470942 XPCQ01831 940 aaPredicted RBP22.6■■□□□ 1.21
HDAC6-218ENST00000470942 PNPLA6Q8IY17 1366 aa22.6■■□□□ 1.21
HDAC6-218ENST00000470942 KIF1AQ12756 1690 aa22.59■■□□□ 1.21
HDAC6-218ENST00000470942 SOCS7O14512 581 aa22.59■■□□□ 1.21
HDAC6-218ENST00000470942 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
HDAC6-218ENST00000470942 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
HDAC6-218ENST00000470942 PXDNQ92626 1479 aa22.55■■□□□ 1.2
HDAC6-218ENST00000470942 WASLO00401 505 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-218ENST00000470942 POTEAQ6S8J7 498 aa22.55■■□□□ 1.2
HDAC6-218ENST00000470942 USP32Q8NFA0 1604 aa22.54■■□□□ 1.2
HDAC6-218ENST00000470942 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
HDAC6-218ENST00000470942 KRT28Q7Z3Y7 464 aa22.53■■□□□ 1.2
HDAC6-218ENST00000470942 ANKARQ7Z5J8 1434 aa22.53■■□□□ 1.2
HDAC6-218ENST00000470942 PMFBP1Q8TBY8 1022 aa22.52■■□□□ 1.2
HDAC6-218ENST00000470942 TRPM1Q7Z4N2 1603 aa22.5■■□□□ 1.19
HDAC6-218ENST00000470942 ADAMTS2O95450 1211 aa22.5■■□□□ 1.19
HDAC6-218ENST00000470942 ZNF772Q68DY9 489 aaPredicted RBP22.5■■□□□ 1.19
HDAC6-218ENST00000470942 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
HDAC6-218ENST00000470942 PSME1Q06323 249 aa22.49■■□□□ 1.19
HDAC6-218ENST00000470942 C8orf37Q96NL8 207 aa22.49■■□□□ 1.19
HDAC6-218ENST00000470942 PRR36Q9H6K5 1346 aa22.49■■□□□ 1.19
HDAC6-218ENST00000470942 COL22A1Q8NFW1 1626 aaPredicted RBP22.49■■□□□ 1.19
HDAC6-218ENST00000470942 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
HDAC6-218ENST00000470942 CDK19Q9BWU1 502 aa22.47■■□□□ 1.19
HDAC6-218ENST00000470942 AFF2P51816 1311 aa22.47■■□□□ 1.19
HDAC6-218ENST00000470942 CENPJQ9HC77 1338 aaPredicted RBP22.47■■□□□ 1.19
HDAC6-218ENST00000470942 SPATA31A3Q5VYP0 1347 aa22.46■■□□□ 1.19
HDAC6-218ENST00000470942 ROCK2O75116 1388 aaKnown RBP22.46■■□□□ 1.19
HDAC6-218ENST00000470942 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
HDAC6-218ENST00000470942 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
HDAC6-218ENST00000470942 ITSN1Q15811 1721 aa22.45■■□□□ 1.18
HDAC6-218ENST00000470942 NBPF8Q3BBV2 869 aa22.44■■□□□ 1.18
HDAC6-218ENST00000470942 LMOD2Q6P5Q4 547 aa22.44■■□□□ 1.18
HDAC6-218ENST00000470942 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
HDAC6-218ENST00000470942 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
HDAC6-218ENST00000470942 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
HDAC6-218ENST00000470942 TNS3Q68CZ2 1445 aa22.42■■□□□ 1.18
HDAC6-218ENST00000470942 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
HDAC6-218ENST00000470942 GPRASP1Q5JY77 1395 aa22.41■■□□□ 1.18
HDAC6-218ENST00000470942 PLEKHG5O94827 1062 aa22.41■■□□□ 1.18
HDAC6-218ENST00000470942 ATP7BP35670 1465 aa22.41■■□□□ 1.18
HDAC6-218ENST00000470942 MARF1Q9Y4F3 1742 aaKnown RBP22.4■■□□□ 1.18
HDAC6-218ENST00000470942 SRPK2P78362 688 aaKnown RBP22.39■■□□□ 1.17
HDAC6-218ENST00000470942 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
HDAC6-218ENST00000470942 RXRBP28702 533 aa22.37■■□□□ 1.17
HDAC6-218ENST00000470942 QTRT2Q9H974 415 aaKnown RBP22.37■■□□□ 1.17
HDAC6-218ENST00000470942 CCDC61Q9Y6R9 512 aa22.37■■□□□ 1.17
HDAC6-218ENST00000470942 TRPM3Q9HCF6 1732 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-218ENST00000470942 ARHGEF10O15013 1369 aa22.37■■□□□ 1.17
HDAC6-218ENST00000470942 CABLES1Q8TDN4 633 aa22.36■■□□□ 1.17
HDAC6-218ENST00000470942 CABP2Q9NPB3 220 aa22.36■■□□□ 1.17
HDAC6-218ENST00000470942 USP21Q9UK80 565 aa22.36■■□□□ 1.17
HDAC6-218ENST00000470942 TOPAZ1Q8N9V7 1692 aa22.36■■□□□ 1.17
HDAC6-218ENST00000470942 PAK3O75914 559 aaPredicted RBP22.35■■□□□ 1.17
HDAC6-218ENST00000470942 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
HDAC6-218ENST00000470942 FNBP4Q8N3X1 1017 aaPredicted RBP22.32■■□□□ 1.16
HDAC6-218ENST00000470942 ALS2Q96Q42 1657 aa22.32■■□□□ 1.16
HDAC6-218ENST00000470942 ACEP12821 1306 aa22.31■■□□□ 1.16
HDAC6-218ENST00000470942 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
HDAC6-218ENST00000470942 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
HDAC6-218ENST00000470942 PLEKHG3A1L390 1219 aa22.31■■□□□ 1.16
HDAC6-218ENST00000470942 RBM6P78332 1123 aaKnown RBP22.3■■□□□ 1.16
HDAC6-218ENST00000470942 ABCA3Q99758 1704 aa22.3■■□□□ 1.16
HDAC6-218ENST00000470942 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
HDAC6-218ENST00000470942 TRPC5Q9UL62 973 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms