RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 BHMG1C9JSJ3 638 aaPredicted RBP7.68□□□□□ -1.18
PRPF3-204ENST00000470824 WWC1Q8IX03 1113 aa7.68□□□□□ -1.18
PRPF3-204ENST00000470824 MRPL50Q8N5N7 158 aaKnown RBP7.68□□□□□ -1.18
PRPF3-204ENST00000470824 MTMR14Q8NCE2 650 aa7.68□□□□□ -1.18
PRPF3-204ENST00000470824 NECTIN2Q92692 538 aa7.68□□□□□ -1.18
PRPF3-204ENST00000470824 ZFRQ96KR1 1074 aaKnown RBP7.68□□□□□ -1.18
PRPF3-204ENST00000470824 PCDHGC3Q9UN70 934 aa7.68□□□□□ -1.18
PRPF3-204ENST00000470824 RNF40O75150 1001 aa7.67□□□□□ -1.18
PRPF3-204ENST00000470824 CFHP08603 1231 aa7.67□□□□□ -1.18
PRPF3-204ENST00000470824 ATP6V1AP38606 617 aa7.67□□□□□ -1.18
PRPF3-204ENST00000470824 FUT2Q10981 343 aa7.67□□□□□ -1.18
PRPF3-204ENST00000470824 KMT5BQ4FZB7 885 aa7.67□□□□□ -1.18
PRPF3-204ENST00000470824 ZNF777Q9ULD5 760 aaPredicted RBP7.67□□□□□ -1.18
PRPF3-204ENST00000470824 USP17L8P0C7I0 530 aa7.66□□□□□ -1.18
PRPF3-204ENST00000470824 GUCA2AQ02747 115 aa7.66□□□□□ -1.18
PRPF3-204ENST00000470824 MTMR2Q13614 643 aa7.66□□□□□ -1.18
PRPF3-204ENST00000470824 HLA-CQ95604 372 aa7.66□□□□□ -1.18
PRPF3-204ENST00000470824 LRCH3Q96II8 777 aa7.65□□□□□ -1.18
PRPF3-204ENST00000470824 GDPD2Q9HCC8 539 aa7.65□□□□□ -1.18
PRPF3-204ENST00000470824 ZNF330Q9Y3S2 320 aaPredicted RBP7.65□□□□□ -1.18
PRPF3-204ENST00000470824 C6orf229H3BNL8 230 aa7.64□□□□□ -1.19
PRPF3-204ENST00000470824 CCDC82Q8N4S0 544 aa7.64□□□□□ -1.19
PRPF3-204ENST00000470824 HELBQ8NG08 1087 aaPredicted RBP7.64□□□□□ -1.19
PRPF3-204ENST00000470824 KCTD12Q96CX2 325 aaKnown RBP7.64□□□□□ -1.19
PRPF3-204ENST00000470824 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
PRPF3-204ENST00000470824 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.63□□□□□ -1.19
PRPF3-204ENST00000470824 GOLGA8CPA6NN73 597 aa7.62□□□□□ -1.19
PRPF3-204ENST00000470824 ABL2P42684 1182 aa7.62□□□□□ -1.19
PRPF3-204ENST00000470824 CTDSPL2Q05D32 466 aa7.62□□□□□ -1.19
PRPF3-204ENST00000470824 TSC1Q92574 1164 aa7.62□□□□□ -1.19
PRPF3-204ENST00000470824 PRR14Q9BWN1 585 aa7.62□□□□□ -1.19
PRPF3-204ENST00000470824 ACTN4O43707 911 aaKnown RBP7.61□□□□□ -1.19
PRPF3-204ENST00000470824 ANKK1Q8NFD2 765 aa7.61□□□□□ -1.19
PRPF3-204ENST00000470824 CCDC97Q96F63 343 aaPredicted RBP7.61□□□□□ -1.19
PRPF3-204ENST00000470824 SERPINA10Q9UK55 444 aa7.61□□□□□ -1.19
PRPF3-204ENST00000470824 TBC1D2BQ9UPU7 963 aa7.61□□□□□ -1.19
PRPF3-204ENST00000470824 CFAP99D6REC4 459 aa7.6□□□□□ -1.19
PRPF3-204ENST00000470824 HRO43593 1189 aa7.6□□□□□ -1.19
PRPF3-204ENST00000470824 Q3C1V9 767 aa7.6□□□□□ -1.19
PRPF3-204ENST00000470824 MORN1Q5T089 497 aa7.6□□□□□ -1.19
PRPF3-204ENST00000470824 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
PRPF3-204ENST00000470824 GJD4Q96KN9 370 aaPredicted RBP7.59□□□□□ -1.19
PRPF3-204ENST00000470824 PPP4CP60510 307 aa7.58□□□□□ -1.2
PRPF3-204ENST00000470824 PUS10Q3MIT2 529 aaKnown RBP7.58□□□□□ -1.2
PRPF3-204ENST00000470824 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
PRPF3-204ENST00000470824 PRR7Q8TB68 274 aa7.58□□□□□ -1.2
PRPF3-204ENST00000470824 SYMPKQ92797 1274 aaKnown RBP7.58□□□□□ -1.2
PRPF3-204ENST00000470824 SLC27A5Q9Y2P5 690 aa7.58□□□□□ -1.2
PRPF3-204ENST00000470824 SOWAHBA6NEL2 793 aa7.57□□□□□ -1.2
PRPF3-204ENST00000470824 PTPN5P54829 565 aa7.57□□□□□ -1.2
PRPF3-204ENST00000470824 LRRN4Q8WUT4 740 aa7.57□□□□□ -1.2
PRPF3-204ENST00000470824 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
PRPF3-204ENST00000470824 WASHC4Q2M389 1173 aa7.56□□□□□ -1.2
PRPF3-204ENST00000470824 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
PRPF3-204ENST00000470824 TSR3Q9UJK0 312 aaKnown RBP7.56□□□□□ -1.2
PRPF3-204ENST00000470824 HPS5Q9UPZ3 1129 aa7.56□□□□□ -1.2
PRPF3-204ENST00000470824 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
PRPF3-204ENST00000470824 CALR3Q96L12 384 aaKnown RBP7.55□□□□□ -1.2
PRPF3-204ENST00000470824 IRF5Q13568 498 aa7.54□□□□□ -1.2
PRPF3-204ENST00000470824 WNT2BQ93097 391 aa7.54□□□□□ -1.2
PRPF3-204ENST00000470824 SALL2Q9Y467 1007 aaPredicted RBP7.54□□□□□ -1.2
PRPF3-204ENST00000470824 POM121CA8CG34 1229 aa7.53□□□□□ -1.2
PRPF3-204ENST00000470824 NR1I2O75469 434 aa7.53□□□□□ -1.2
PRPF3-204ENST00000470824 BCAMP50895 628 aa7.53□□□□□ -1.2
PRPF3-204ENST00000470824 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
PRPF3-204ENST00000470824 PCDHB3Q9Y5E6 796 aa7.53□□□□□ -1.2
PRPF3-204ENST00000470824 APLP1P51693 650 aa7.52□□□□□ -1.21
PRPF3-204ENST00000470824 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
PRPF3-204ENST00000470824 SCUBE3Q8IX30 993 aa7.52□□□□□ -1.21
PRPF3-204ENST00000470824 PNMA1Q8ND90 353 aa7.52□□□□□ -1.21
PRPF3-204ENST00000470824 GLMNQ92990 594 aa7.52□□□□□ -1.21
PRPF3-204ENST00000470824 PER1O15534 1290 aaPredicted RBP7.51□□□□□ -1.21
PRPF3-204ENST00000470824 FMNL1O95466 1100 aaPredicted RBP7.51□□□□□ -1.21
PRPF3-204ENST00000470824 NR6A1Q15406 480 aa7.51□□□□□ -1.21
PRPF3-204ENST00000470824 BLOC1S3Q6QNY0 202 aa7.51□□□□□ -1.21
PRPF3-204ENST00000470824 LYPD8Q6UX82 237 aa7.51□□□□□ -1.21
PRPF3-204ENST00000470824 RNF19BQ6ZMZ0 732 aa7.51□□□□□ -1.21
PRPF3-204ENST00000470824 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
PRPF3-204ENST00000470824 EPS8L1Q8TE68 723 aa7.5□□□□□ -1.21
PRPF3-204ENST00000470824 GPR37L1O60883 481 aa7.49□□□□□ -1.21
PRPF3-204ENST00000470824 PDIA4P13667 645 aaKnown RBP7.49□□□□□ -1.21
PRPF3-204ENST00000470824 VAC14Q08AM6 782 aa7.48□□□□□ -1.21
PRPF3-204ENST00000470824 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
PRPF3-204ENST00000470824 WBP1LQ9NX94 342 aa7.48□□□□□ -1.21
PRPF3-204ENST00000470824 JUNDP17535 347 aa7.47□□□□□ -1.21
PRPF3-204ENST00000470824 SOX11P35716 441 aa7.47□□□□□ -1.21
PRPF3-204ENST00000470824 THSD4Q6ZMP0 1018 aa7.47□□□□□ -1.21
PRPF3-204ENST00000470824 PPP1R15AO75807 674 aaPredicted RBP7.46□□□□□ -1.22
PRPF3-204ENST00000470824 PTPRNQ16849 979 aa7.45□□□□□ -1.22
PRPF3-204ENST00000470824 NYAP1Q6ZVC0 841 aa7.45□□□□□ -1.22
PRPF3-204ENST00000470824 ADAMTS19Q8TE59 1207 aa7.45□□□□□ -1.22
PRPF3-204ENST00000470824 ALG2Q9H553 416 aa7.45□□□□□ -1.22
PRPF3-204ENST00000470824 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
PRPF3-204ENST00000470824 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
PRPF3-204ENST00000470824 MSS51Q4VC12 460 aa7.44□□□□□ -1.22
PRPF3-204ENST00000470824 SPSB2Q99619 263 aa7.44□□□□□ -1.22
PRPF3-204ENST00000470824 COPS2P61201 443 aa7.43□□□□□ -1.22
PRPF3-204ENST00000470824 EIF4G2P78344 907 aaKnown RBP eCLIP7.43□□□□□ -1.22
PRPF3-204ENST00000470824 FKBPLQ9UIM3 349 aa7.43□□□□□ -1.22
PRPF3-204ENST00000470824 F12P00748 615 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms