RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
CCDC93-206ENST00000470650 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
CCDC93-206ENST00000470650 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
CCDC93-206ENST00000470650 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
CCDC93-206ENST00000470650 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
CCDC93-206ENST00000470650 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
CCDC93-206ENST00000470650 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
CCDC93-206ENST00000470650 SPIRE2Q8WWL2 714 aa11.28□□□□□ -0.6
CCDC93-206ENST00000470650 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
CCDC93-206ENST00000470650 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
CCDC93-206ENST00000470650 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
CCDC93-206ENST00000470650 NDUFV2P19404 249 aa11.27□□□□□ -0.61
CCDC93-206ENST00000470650 GGCXP38435 758 aa11.27□□□□□ -0.61
CCDC93-206ENST00000470650 RGS20O76081 388 aa11.26□□□□□ -0.61
CCDC93-206ENST00000470650 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
CCDC93-206ENST00000470650 USP46P62068 366 aa11.25□□□□□ -0.61
CCDC93-206ENST00000470650 EMID1Q96A84 441 aaPredicted RBP11.25□□□□□ -0.61
CCDC93-206ENST00000470650 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
CCDC93-206ENST00000470650 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
CCDC93-206ENST00000470650 PLA2G2CQ5R387 149 aa11.23□□□□□ -0.61
CCDC93-206ENST00000470650 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
CCDC93-206ENST00000470650 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
CCDC93-206ENST00000470650 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
CCDC93-206ENST00000470650 FDX1P10109 184 aa11.21□□□□□ -0.61
CCDC93-206ENST00000470650 SALL2Q9Y467 1007 aaPredicted RBP11.21□□□□□ -0.61
CCDC93-206ENST00000470650 Q3C1V9 767 aa11.2□□□□□ -0.62
CCDC93-206ENST00000470650 TPRNQ4KMQ1 711 aa11.2□□□□□ -0.62
CCDC93-206ENST00000470650 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
CCDC93-206ENST00000470650 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
CCDC93-206ENST00000470650 USB1Q9BQ65 265 aaKnown RBP11.19□□□□□ -0.62
CCDC93-206ENST00000470650 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
CCDC93-206ENST00000470650 SLC19A1P41440 591 aa11.18□□□□□ -0.62
CCDC93-206ENST00000470650 FCF1Q9Y324 198 aaKnown RBP11.18□□□□□ -0.62
CCDC93-206ENST00000470650 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
CCDC93-206ENST00000470650 PCDHB15Q9Y5E8 787 aa11.17□□□□□ -0.62
CCDC93-206ENST00000470650 WDR62O43379 1518 aa11.17□□□□□ -0.62
CCDC93-206ENST00000470650 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
CCDC93-206ENST00000470650 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
CCDC93-206ENST00000470650 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
CCDC93-206ENST00000470650 C6orf229H3BNL8 230 aa11.16□□□□□ -0.62
CCDC93-206ENST00000470650 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
CCDC93-206ENST00000470650 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
CCDC93-206ENST00000470650 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
CCDC93-206ENST00000470650 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
CCDC93-206ENST00000470650 MRC2Q9UBG0 1479 aa11.14□□□□□ -0.63
CCDC93-206ENST00000470650 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
CCDC93-206ENST00000470650 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
CCDC93-206ENST00000470650 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
CCDC93-206ENST00000470650 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
CCDC93-206ENST00000470650 FAM117AQ9C073 453 aa11.12□□□□□ -0.63
CCDC93-206ENST00000470650 MMP16P51512 607 aa11.11□□□□□ -0.63
CCDC93-206ENST00000470650 MYSM1Q5VVJ2 828 aa11.11□□□□□ -0.63
CCDC93-206ENST00000470650 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
CCDC93-206ENST00000470650 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
CCDC93-206ENST00000470650 DXOO77932 396 aaKnown RBP11.1□□□□□ -0.63
CCDC93-206ENST00000470650 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
CCDC93-206ENST00000470650 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
CCDC93-206ENST00000470650 SPTLC1O15269 473 aa11.09□□□□□ -0.63
CCDC93-206ENST00000470650 GFRA3O60609 400 aa11.09□□□□□ -0.63
CCDC93-206ENST00000470650 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
CCDC93-206ENST00000470650 RETREG3Q86VR2 466 aa11.09□□□□□ -0.63
CCDC93-206ENST00000470650 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
CCDC93-206ENST00000470650 JUNDP17535 347 aa11.07□□□□□ -0.64
CCDC93-206ENST00000470650 MTMR2Q13614 643 aa11.07□□□□□ -0.64
CCDC93-206ENST00000470650 DIXDC1Q155Q3 683 aa11.07□□□□□ -0.64
CCDC93-206ENST00000470650 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
CCDC93-206ENST00000470650 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
CCDC93-206ENST00000470650 PRR7Q8TB68 274 aa11.07□□□□□ -0.64
CCDC93-206ENST00000470650 HRCP23327 699 aa11.06□□□□□ -0.64
CCDC93-206ENST00000470650 ZNF598Q86UK7 904 aaKnown RBP11.06□□□□□ -0.64
CCDC93-206ENST00000470650 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
CCDC93-206ENST00000470650 QPCTQ16769 361 aa11.05□□□□□ -0.64
CCDC93-206ENST00000470650 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
CCDC93-206ENST00000470650 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
CCDC93-206ENST00000470650 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
CCDC93-206ENST00000470650 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
CCDC93-206ENST00000470650 FOXC1Q12948 553 aa11.04□□□□□ -0.64
CCDC93-206ENST00000470650 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
CCDC93-206ENST00000470650 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
CCDC93-206ENST00000470650 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
CCDC93-206ENST00000470650 ZBTB24O43167 697 aaPredicted RBP11.02□□□□□ -0.65
CCDC93-206ENST00000470650 GJA5P36382 358 aa11.02□□□□□ -0.65
CCDC93-206ENST00000470650 RPIAP49247 311 aa11.01□□□□□ -0.65
CCDC93-206ENST00000470650 RTL5Q5HYW3 569 aaPredicted RBP11.01□□□□□ -0.65
CCDC93-206ENST00000470650 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
CCDC93-206ENST00000470650 PROCA1Q8NCQ7 364 aaPredicted RBP11.01□□□□□ -0.65
CCDC93-206ENST00000470650 TSC1Q92574 1164 aa11.01□□□□□ -0.65
CCDC93-206ENST00000470650 NUDT12Q9BQG2 462 aa11.01□□□□□ -0.65
CCDC93-206ENST00000470650 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
CCDC93-206ENST00000470650 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
CCDC93-206ENST00000470650 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
CCDC93-206ENST00000470650 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
CCDC93-206ENST00000470650 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
CCDC93-206ENST00000470650 Q6ZNB5 142 aa11□□□□□ -0.65
CCDC93-206ENST00000470650 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
CCDC93-206ENST00000470650 GDF9O60383 454 aa10.99□□□□□ -0.65
CCDC93-206ENST00000470650 CD2BP2O95400 341 aaKnown RBP10.99□□□□□ -0.65
CCDC93-206ENST00000470650 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
CCDC93-206ENST00000470650 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
CCDC93-206ENST00000470650 PKD2L1Q9P0L9 805 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms