RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 PLEKHH1Q9ULM0 1364 aa15.35■□□□□ 0.05
LDHB-205ENST00000470280 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
LDHB-205ENST00000470280 BRINP3Q76B58 766 aa15.34■□□□□ 0.05
LDHB-205ENST00000470280 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
LDHB-205ENST00000470280 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
LDHB-205ENST00000470280 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
LDHB-205ENST00000470280 ADGRB1O14514 1584 aa15.31■□□□□ 0.04
LDHB-205ENST00000470280 LAMC1P11047 1609 aa15.31■□□□□ 0.04
LDHB-205ENST00000470280 KNDC1Q76NI1 1749 aa15.31■□□□□ 0.04
LDHB-205ENST00000470280 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
LDHB-205ENST00000470280 C1orf167Q5SNV9 1468 aa15.3■□□□□ 0.04
LDHB-205ENST00000470280 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
LDHB-205ENST00000470280 AHDC1Q5TGY3 1603 aaPredicted RBP15.29■□□□□ 0.04
LDHB-205ENST00000470280 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
LDHB-205ENST00000470280 DDX17Q92841 729 aaKnown RBP15.28■□□□□ 0.04
LDHB-205ENST00000470280 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
LDHB-205ENST00000470280 SIRT1Q96EB6 747 aa15.27■□□□□ 0.04
LDHB-205ENST00000470280 ORAI2Q96SN7 254 aa15.27■□□□□ 0.04
LDHB-205ENST00000470280 CDC42BPGQ6DT37 1551 aa15.27■□□□□ 0.03
LDHB-205ENST00000470280 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
LDHB-205ENST00000470280 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
LDHB-205ENST00000470280 SAFB2Q14151 953 aaKnown RBP eCLIP15.25■□□□□ 0.03
LDHB-205ENST00000470280 L3MBTL2Q969R5 705 aa15.25■□□□□ 0.03
LDHB-205ENST00000470280 TRAK1Q9UPV9 953 aa15.25■□□□□ 0.03
LDHB-205ENST00000470280 NHSL1Q5SYE7 1610 aa15.25■□□□□ 0.03
LDHB-205ENST00000470280 JCADQ9P266 1359 aa15.24■□□□□ 0.03
LDHB-205ENST00000470280 DLC1Q96QB1 1528 aa15.24■□□□□ 0.03
LDHB-205ENST00000470280 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
LDHB-205ENST00000470280 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
LDHB-205ENST00000470280 POGKQ9P215 609 aa15.21■□□□□ 0.03
LDHB-205ENST00000470280 ESCO1Q5FWF5 840 aa15.2■□□□□ 0.02
LDHB-205ENST00000470280 RGS17Q9UGC6 210 aaPredicted RBP15.2■□□□□ 0.02
LDHB-205ENST00000470280 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
LDHB-205ENST00000470280 LRP6O75581 1613 aa15.19■□□□□ 0.02
LDHB-205ENST00000470280 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
LDHB-205ENST00000470280 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
LDHB-205ENST00000470280 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
LDHB-205ENST00000470280 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
LDHB-205ENST00000470280 ARHGEF28Q8N1W1 1705 aaKnown RBP15.17■□□□□ 0.02
LDHB-205ENST00000470280 KIAA1210Q9ULL0 1709 aa15.17■□□□□ 0.02
LDHB-205ENST00000470280 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
LDHB-205ENST00000470280 FOXO3O43524 673 aa15.16■□□□□ 0.02
LDHB-205ENST00000470280 XPCQ01831 940 aaPredicted RBP15.16■□□□□ 0.02
LDHB-205ENST00000470280 LRRC59Q96AG4 307 aaKnown RBP15.16■□□□□ 0.02
LDHB-205ENST00000470280 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
LDHB-205ENST00000470280 ADGRB2O60241 1585 aa15.15■□□□□ 0.02
LDHB-205ENST00000470280 PXDNQ92626 1479 aa15.14■□□□□ 0.01
LDHB-205ENST00000470280 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
LDHB-205ENST00000470280 NBPF8Q3BBV2 869 aa15.14■□□□□ 0.01
LDHB-205ENST00000470280 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
LDHB-205ENST00000470280 PRR36Q9H6K5 1346 aa15.14■□□□□ 0.01
LDHB-205ENST00000470280 NUTM2BA6NNL0 878 aaPredicted RBP15.13■□□□□ 0.01
LDHB-205ENST00000470280 NUTM2EB1AL46 878 aaPredicted RBP15.13■□□□□ 0.01
LDHB-205ENST00000470280 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
LDHB-205ENST00000470280 RGPD8O14715 1765 aaPredicted RBP15.12■□□□□ 0.01
LDHB-205ENST00000470280 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
LDHB-205ENST00000470280 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
LDHB-205ENST00000470280 TRPM1Q7Z4N2 1603 aa15.11■□□□□ 0.01
LDHB-205ENST00000470280 POTEAQ6S8J7 498 aa15.11■□□□□ 0.01
LDHB-205ENST00000470280 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
LDHB-205ENST00000470280 ANKARQ7Z5J8 1434 aa15.1■□□□□ 0.01
LDHB-205ENST00000470280 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
LDHB-205ENST00000470280 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
LDHB-205ENST00000470280 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
LDHB-205ENST00000470280 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
LDHB-205ENST00000470280 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
LDHB-205ENST00000470280 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0
LDHB-205ENST00000470280 CDK19Q9BWU1 502 aa15.07■□□□□ 0
LDHB-205ENST00000470280 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
LDHB-205ENST00000470280 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
LDHB-205ENST00000470280 ATP7BP35670 1465 aa15.07■□□□□ 0
LDHB-205ENST00000470280 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
LDHB-205ENST00000470280 COL22A1Q8NFW1 1626 aaPredicted RBP15.06■□□□□ 0
LDHB-205ENST00000470280 ADAMTS2O95450 1211 aa15.05■□□□□ -0
LDHB-205ENST00000470280 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ -0
LDHB-205ENST00000470280 EIF3AQ14152 1382 aaKnown RBP15.05■□□□□ -0
LDHB-205ENST00000470280 GPRASP1Q5JY77 1395 aa15.05■□□□□ -0
LDHB-205ENST00000470280 SOCS7O14512 581 aa15.04■□□□□ -0
LDHB-205ENST00000470280 AFF2P51816 1311 aa15.03■□□□□ -0
LDHB-205ENST00000470280 PSME1Q06323 249 aa15.03■□□□□ -0
LDHB-205ENST00000470280 C8orf37Q96NL8 207 aa15.03■□□□□ -0
LDHB-205ENST00000470280 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
LDHB-205ENST00000470280 QRICH2Q9H0J4 1663 aa15.02□□□□□ -0.01
LDHB-205ENST00000470280 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
LDHB-205ENST00000470280 SBNO1A3KN83 1393 aa15.01□□□□□ -0.01
LDHB-205ENST00000470280 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
LDHB-205ENST00000470280 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
LDHB-205ENST00000470280 NGDNQ8NEJ9 315 aaKnown RBP15□□□□□ -0.01
LDHB-205ENST00000470280 CABLES1Q8TDN4 633 aa15□□□□□ -0.01
LDHB-205ENST00000470280 TRPM3Q9HCF6 1732 aaPredicted RBP15□□□□□ -0.01
LDHB-205ENST00000470280 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
LDHB-205ENST00000470280 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
LDHB-205ENST00000470280 SRPK2P78362 688 aaKnown RBP14.99□□□□□ -0.01
LDHB-205ENST00000470280 ZNF772Q68DY9 489 aaPredicted RBP14.99□□□□□ -0.01
LDHB-205ENST00000470280 CARD11Q9BXL7 1154 aa14.99□□□□□ -0.01
LDHB-205ENST00000470280 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
LDHB-205ENST00000470280 PLEKHG3A1L390 1219 aa14.98□□□□□ -0.01
LDHB-205ENST00000470280 LMOD2Q6P5Q4 547 aa14.98□□□□□ -0.01
LDHB-205ENST00000470280 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
LDHB-205ENST00000470280 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms