RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-209ENST00000470247 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-209ENST00000470247 DISP3Q9P2K9 1392 aa15.77■□□□□ 0.12
SREBF1-209ENST00000470247 QRICH2Q9H0J4 1663 aa15.76■□□□□ 0.11
SREBF1-209ENST00000470247 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
SREBF1-209ENST00000470247 TMF1P82094 1093 aa15.75■□□□□ 0.11
SREBF1-209ENST00000470247 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
SREBF1-209ENST00000470247 LRRC7Q96NW7 1537 aa15.74■□□□□ 0.11
SREBF1-209ENST00000470247 TULP4Q9NRJ4 1543 aa15.74■□□□□ 0.11
SREBF1-209ENST00000470247 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
SREBF1-209ENST00000470247 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
SREBF1-209ENST00000470247 LTBP4Q8N2S1 1624 aa15.74■□□□□ 0.11
SREBF1-209ENST00000470247 WASLO00401 505 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-209ENST00000470247 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
SREBF1-209ENST00000470247 NCOA3Q9Y6Q9 1424 aa15.73■□□□□ 0.11
SREBF1-209ENST00000470247 CCDC7Q96M83 1385 aa15.73■□□□□ 0.11
SREBF1-209ENST00000470247 EVC2Q86UK5 1308 aa15.72■□□□□ 0.11
SREBF1-209ENST00000470247 ADGRL3Q9HAR2 1447 aa15.72■□□□□ 0.11
SREBF1-209ENST00000470247 PUS7Q96PZ0 661 aaKnown RBP15.72■□□□□ 0.11
SREBF1-209ENST00000470247 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
SREBF1-209ENST00000470247 ADGRB2O60241 1585 aa15.7■□□□□ 0.1
SREBF1-209ENST00000470247 C19orf44Q9H6X5 657 aa15.7■□□□□ 0.1
SREBF1-209ENST00000470247 PRR36Q9H6K5 1346 aa15.68■□□□□ 0.1
SREBF1-209ENST00000470247 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
SREBF1-209ENST00000470247 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
SREBF1-209ENST00000470247 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
SREBF1-209ENST00000470247 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
SREBF1-209ENST00000470247 C14orf37Q86TY3 774 aa15.66■□□□□ 0.1
SREBF1-209ENST00000470247 NUDT16Q96DE0 195 aaKnown RBP15.66■□□□□ 0.1
SREBF1-209ENST00000470247 POLR3GLQ9BT43 218 aa15.65■□□□□ 0.1
SREBF1-209ENST00000470247 CDC42BPGQ6DT37 1551 aa15.65■□□□□ 0.1
SREBF1-209ENST00000470247 SLC12A5Q9H2X9 1139 aa15.64■□□□□ 0.09
SREBF1-209ENST00000470247 ATP7BP35670 1465 aa15.64■□□□□ 0.09
SREBF1-209ENST00000470247 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
SREBF1-209ENST00000470247 DCCP43146 1447 aa15.63■□□□□ 0.09
SREBF1-209ENST00000470247 NUTM2FA1L443 756 aa15.63■□□□□ 0.09
SREBF1-209ENST00000470247 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
SREBF1-209ENST00000470247 MSH6P52701 1360 aa15.62■□□□□ 0.09
SREBF1-209ENST00000470247 DDX10Q13206 875 aaKnown RBP15.62■□□□□ 0.09
SREBF1-209ENST00000470247 USP32Q8NFA0 1604 aa15.61■□□□□ 0.09
SREBF1-209ENST00000470247 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
SREBF1-209ENST00000470247 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
SREBF1-209ENST00000470247 ATF3P18847 181 aa15.61■□□□□ 0.09
SREBF1-209ENST00000470247 CADPS2Q86UW7 1296 aa15.61■□□□□ 0.09
SREBF1-209ENST00000470247 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
SREBF1-209ENST00000470247 MST1RQ04912 1400 aa15.6■□□□□ 0.09
SREBF1-209ENST00000470247 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
SREBF1-209ENST00000470247 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
SREBF1-209ENST00000470247 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
SREBF1-209ENST00000470247 MYOM1P52179 1685 aa15.58■□□□□ 0.08
SREBF1-209ENST00000470247 PER1O15534 1290 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-209ENST00000470247 TMC1Q8TDI8 760 aa15.58■□□□□ 0.08
SREBF1-209ENST00000470247 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
SREBF1-209ENST00000470247 PANK3Q9H999 370 aa15.58■□□□□ 0.08
SREBF1-209ENST00000470247 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
SREBF1-209ENST00000470247 CARD14Q9BXL6 1004 aa15.57■□□□□ 0.08
SREBF1-209ENST00000470247 NINLQ9Y2I6 1382 aa15.57■□□□□ 0.08
SREBF1-209ENST00000470247 CERKQ8TCT0 537 aa15.56■□□□□ 0.08
SREBF1-209ENST00000470247 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
SREBF1-209ENST00000470247 CPSF1Q10570 1443 aaKnown RBP15.56■□□□□ 0.08
SREBF1-209ENST00000470247 RGPD8O14715 1765 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-209ENST00000470247 TOPAZ1Q8N9V7 1692 aa15.55■□□□□ 0.08
SREBF1-209ENST00000470247 ACEP12821 1306 aa15.55■□□□□ 0.08
SREBF1-209ENST00000470247 ESCO1Q5FWF5 840 aa15.55■□□□□ 0.08
SREBF1-209ENST00000470247 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
SREBF1-209ENST00000470247 PHF8Q9UPP1 1060 aa15.55■□□□□ 0.08
SREBF1-209ENST00000470247 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-209ENST00000470247 ANKRD36BQ8N2N9 1353 aa15.54■□□□□ 0.08
SREBF1-209ENST00000470247 A0A1W2PP64 1363 aa15.53■□□□□ 0.08
SREBF1-209ENST00000470247 BRINP3Q76B58 766 aa15.52■□□□□ 0.08
SREBF1-209ENST00000470247 TERF2IPQ9NYB0 399 aa15.52■□□□□ 0.08
SREBF1-209ENST00000470247 IQSEC2Q5JU85 1478 aa15.52■□□□□ 0.07
SREBF1-209ENST00000470247 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-209ENST00000470247 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
SREBF1-209ENST00000470247 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-209ENST00000470247 NGDNQ8NEJ9 315 aaKnown RBP15.5■□□□□ 0.07
SREBF1-209ENST00000470247 FOXO3O43524 673 aa15.49■□□□□ 0.07
SREBF1-209ENST00000470247 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
SREBF1-209ENST00000470247 ITSN1Q15811 1721 aa15.48■□□□□ 0.07
SREBF1-209ENST00000470247 DDX17Q92841 729 aaKnown RBP15.48■□□□□ 0.07
SREBF1-209ENST00000470247 USP6P35125 1406 aa15.48■□□□□ 0.07
SREBF1-209ENST00000470247 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
SREBF1-209ENST00000470247 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
SREBF1-209ENST00000470247 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
SREBF1-209ENST00000470247 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
SREBF1-209ENST00000470247 TTC21BQ7Z4L5 1316 aa15.46■□□□□ 0.07
SREBF1-209ENST00000470247 TOM1O60784 492 aa15.46■□□□□ 0.07
SREBF1-209ENST00000470247 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
SREBF1-209ENST00000470247 EDC4Q6P2E9 1401 aaKnown RBP15.45■□□□□ 0.06
SREBF1-209ENST00000470247 UBAP1LF5GYI3 381 aa15.45■□□□□ 0.06
SREBF1-209ENST00000470247 MON2Q7Z3U7 1717 aa15.44■□□□□ 0.06
SREBF1-209ENST00000470247 FYB1O15117 783 aa15.44■□□□□ 0.06
SREBF1-209ENST00000470247 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
SREBF1-209ENST00000470247 PSME1Q06323 249 aa15.44■□□□□ 0.06
SREBF1-209ENST00000470247 KRT28Q7Z3Y7 464 aa15.44■□□□□ 0.06
SREBF1-209ENST00000470247 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
SREBF1-209ENST00000470247 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
SREBF1-209ENST00000470247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
SREBF1-209ENST00000470247 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
SREBF1-209ENST00000470247 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms